RNA–Protein interactions for RNA: ENST00000555497.5

TMEM260-207, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,218 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-207ENST00000555497 MED8Q96G25 268 aa23.57■■□□□ 1.36
TMEM260-207ENST00000555497 AURKBQ96GD4 344 aaPredicted RBP23.57■■□□□ 1.36
TMEM260-207ENST00000555497 C9orf16Q9BUW7 83 aa23.57■■□□□ 1.36
TMEM260-207ENST00000555497 CERS4Q9HA82 394 aa23.57■■□□□ 1.36
TMEM260-207ENST00000555497 TRANK1O15050 2925 aa23.57■■□□□ 1.36
TMEM260-207ENST00000555497 RECQL5O94762 991 aaPredicted RBP23.56■■□□□ 1.36
TMEM260-207ENST00000555497 OR6B1O95007 311 aa23.56■■□□□ 1.36
TMEM260-207ENST00000555497 SLC16A8O95907 504 aa23.56■■□□□ 1.36
TMEM260-207ENST00000555497 CDH1P12830 882 aa23.56■■□□□ 1.36
TMEM260-207ENST00000555497 ITGB7P26010 798 aa23.56■■□□□ 1.36
TMEM260-207ENST00000555497 WDR20Q8TBZ3 569 aa23.56■■□□□ 1.36
TMEM260-207ENST00000555497 GFM2Q969S9 779 aaKnown RBP23.56■■□□□ 1.36
TMEM260-207ENST00000555497 CCDC115Q96NT0 180 aa23.56■■□□□ 1.36
TMEM260-207ENST00000555497 TSC22D3Q99576 134 aa23.56■■□□□ 1.36
TMEM260-207ENST00000555497 TBCDQ9BTW9 1192 aa23.56■■□□□ 1.36
TMEM260-207ENST00000555497 EBPLQ9BY08 206 aa23.56■■□□□ 1.36
TMEM260-207ENST00000555497 ANKRD60Q9BZ19 345 aa23.56■■□□□ 1.36
TMEM260-207ENST00000555497 ZDHHC4Q9NPG8 344 aa23.56■■□□□ 1.36
TMEM260-207ENST00000555497 DEC1Q9P2X7 70 aa23.56■■□□□ 1.36
TMEM260-207ENST00000555497 DPP7Q9UHL4 492 aa23.56■■□□□ 1.36
TMEM260-207ENST00000555497 NUP214P35658 2090 aaPredicted RBP23.56■■□□□ 1.36
TMEM260-207ENST00000555497 LILRB5O75023 590 aa23.56■■□□□ 1.36
TMEM260-207ENST00000555497 RASAL1O95294 804 aa23.56■■□□□ 1.36
TMEM260-207ENST00000555497 CLPTM1O96005 669 aa23.56■■□□□ 1.36
TMEM260-207ENST00000555497 GSNP06396 782 aa23.56■■□□□ 1.36
TMEM260-207ENST00000555497 ATP6V1B1P15313 513 aa23.56■■□□□ 1.36
TMEM260-207ENST00000555497 IMPA1P29218 277 aa23.56■■□□□ 1.36
TMEM260-207ENST00000555497 PTPN6P29350 595 aa23.56■■□□□ 1.36
TMEM260-207ENST00000555497 S100A3P33764 101 aa23.56■■□□□ 1.36
TMEM260-207ENST00000555497 LIPJQ5W064 366 aa23.56■■□□□ 1.36
TMEM260-207ENST00000555497 ADNP2Q6IQ32 1131 aa23.56■■□□□ 1.36
TMEM260-207ENST00000555497 NOXRED1Q6NXP6 359 aa23.56■■□□□ 1.36
TMEM260-207ENST00000555497 XKR5Q6UX68 686 aa23.56■■□□□ 1.36
TMEM260-207ENST00000555497 METTL25Q8N6Q8 603 aa23.56■■□□□ 1.36
TMEM260-207ENST00000555497 FIG4Q92562 907 aa23.56■■□□□ 1.36
TMEM260-207ENST00000555497 CCDC138Q96M89 665 aa23.56■■□□□ 1.36
TMEM260-207ENST00000555497 OLAHQ9NV23 265 aa23.56■■□□□ 1.36
TMEM260-207ENST00000555497 GPRC5BQ9NZH0 403 aa23.56■■□□□ 1.36
TMEM260-207ENST00000555497 RNF103-CHMP3A0A140T963 221 aa23.55■■□□□ 1.36
TMEM260-207ENST00000555497 H0Y858 1186 aa23.55■■□□□ 1.36
TMEM260-207ENST00000555497 MMP20O60882 483 aa23.55■■□□□ 1.36
TMEM260-207ENST00000555497 GNAO1P09471 354 aa23.55■■□□□ 1.36
TMEM260-207ENST00000555497 HOXB9P17482 250 aaPredicted RBP23.55■■□□□ 1.36
TMEM260-207ENST00000555497 CDKN2CP42773 168 aa23.55■■□□□ 1.36
TMEM260-207ENST00000555497 POLE2P56282 527 aa23.55■■□□□ 1.36
TMEM260-207ENST00000555497 APOFQ13790 326 aa23.55■■□□□ 1.36
TMEM260-207ENST00000555497 ZNF234Q14588 700 aa23.55■■□□□ 1.36
TMEM260-207ENST00000555497 PGS1Q32NB8 556 aa23.55■■□□□ 1.36
TMEM260-207ENST00000555497 TMIEQ8NEW7 156 aa23.55■■□□□ 1.36
TMEM260-207ENST00000555497 FGF13Q92913 245 aa23.55■■□□□ 1.36
TMEM260-207ENST00000555497 HHIPQ96QV1 700 aa23.55■■□□□ 1.36
TMEM260-207ENST00000555497 MTERF1Q99551 399 aaKnown RBP23.55■■□□□ 1.36
TMEM260-207ENST00000555497 EDDM13A0A1B0GTR0 161 aa23.55■■□□□ 1.36
TMEM260-207ENST00000555497 EI24O14681 340 aa23.55■■□□□ 1.36
TMEM260-207ENST00000555497 NFATC1O95644 943 aa23.55■■□□□ 1.36
TMEM260-207ENST00000555497 LDLRP01130 860 aa23.55■■□□□ 1.36
TMEM260-207ENST00000555497 CATP04040 527 aaKnown RBP23.55■■□□□ 1.36
TMEM260-207ENST00000555497 SF1Q15637 639 aaKnown RBP23.55■■□□□ 1.36
TMEM260-207ENST00000555497 CNPY1Q3B7I2 92 aa23.55■■□□□ 1.36
TMEM260-207ENST00000555497 LRIF1Q5T3J3 769 aa23.55■■□□□ 1.36
TMEM260-207ENST00000555497 TMTC4Q5T4D3 741 aa23.55■■□□□ 1.36
TMEM260-207ENST00000555497 THEMIS2Q5TEJ8 643 aa23.55■■□□□ 1.36
TMEM260-207ENST00000555497 TBPL2Q6SJ96 375 aa23.55■■□□□ 1.36
TMEM260-207ENST00000555497 OR8D1Q8WZ84 308 aa23.55■■□□□ 1.36
TMEM260-207ENST00000555497 SMARCD2Q92925 531 aa23.55■■□□□ 1.36
TMEM260-207ENST00000555497 FCRL1Q96LA6 429 aa23.55■■□□□ 1.36
TMEM260-207ENST00000555497 MRPS26Q9BYN8 205 aaKnown RBP23.55■■□□□ 1.36
TMEM260-207ENST00000555497 OR2AG1Q9H205 316 aa23.55■■□□□ 1.36
TMEM260-207ENST00000555497 KCNH6Q9H252 994 aa23.55■■□□□ 1.36
TMEM260-207ENST00000555497 NTN4Q9HB63 628 aa23.55■■□□□ 1.36
TMEM260-207ENST00000555497 MAN2B2Q9Y2E5 1009 aa23.55■■□□□ 1.36
TMEM260-207ENST00000555497 TMED5Q9Y3A6 229 aa23.55■■□□□ 1.36
TMEM260-207ENST00000555497 UGDHO60701 494 aa23.54■■□□□ 1.36
TMEM260-207ENST00000555497 C6P13671 934 aa23.54■■□□□ 1.36
TMEM260-207ENST00000555497 NKG7Q16617 165 aa23.54■■□□□ 1.36
TMEM260-207ENST00000555497 ENPP6Q6UWR7 440 aa23.54■■□□□ 1.36
TMEM260-207ENST00000555497 GCNT7Q6ZNI0 430 aa23.54■■□□□ 1.36
TMEM260-207ENST00000555497 LMNTD1Q8N9Z9 388 aa23.54■■□□□ 1.36
TMEM260-207ENST00000555497 TESCQ96BS2 214 aa23.54■■□□□ 1.36
TMEM260-207ENST00000555497 CPPED1Q9BRF8 314 aaPredicted RBP23.54■■□□□ 1.36
TMEM260-207ENST00000555497 KAT8Q9H7Z6 458 aaKnown RBP23.54■■□□□ 1.36
TMEM260-207ENST00000555497 GORASP2Q9H8Y8 452 aa23.54■■□□□ 1.36
TMEM260-207ENST00000555497 C1QCP02747 245 aa23.53■■□□□ 1.36
TMEM260-207ENST00000555497 ADRB3P13945 408 aa23.53■■□□□ 1.36
TMEM260-207ENST00000555497 NRIP1P48552 1158 aa23.53■■□□□ 1.36
TMEM260-207ENST00000555497 GZMMP51124 257 aa23.53■■□□□ 1.36
TMEM260-207ENST00000555497 CLCN2P51788 898 aa23.53■■□□□ 1.36
TMEM260-207ENST00000555497 DDX39BQ13838 428 aaKnown RBP23.53■■□□□ 1.36
TMEM260-207ENST00000555497 SLC30A9Q6PML9 568 aa23.53■■□□□ 1.36
TMEM260-207ENST00000555497 KLHDC8AQ8IYD2 350 aa23.53■■□□□ 1.36
TMEM260-207ENST00000555497 KIAA1958Q8N8K9 716 aa23.53■■□□□ 1.36
TMEM260-207ENST00000555497 OR56A3Q8NH54 315 aa23.53■■□□□ 1.36
TMEM260-207ENST00000555497 NUS1Q96E22 293 aa23.53■■□□□ 1.36
TMEM260-207ENST00000555497 TMEM245Q9H330 911 aa23.53■■□□□ 1.36
TMEM260-207ENST00000555497 INVSQ9Y283 1065 aa23.53■■□□□ 1.36
TMEM260-207ENST00000555497 A0A096LPI6 279 aa23.53■■□□□ 1.36
TMEM260-207ENST00000555497 UPK1AO00322 258 aa23.53■■□□□ 1.36
TMEM260-207ENST00000555497 PCNAP12004 261 aa23.53■■□□□ 1.36
TMEM260-207ENST00000555497 RPL5P46777 297 aaKnown RBP23.53■■□□□ 1.36
TMEM260-207ENST00000555497 PDE12Q6L8Q7 609 aaKnown RBP23.53■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms