RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 CDCA2Q69YH5 1023 aaPredicted RBP13.64□□□□□ -0.23
VTI1B-204ENST00000554659 PYHIN1Q6K0P9 492 aa13.64□□□□□ -0.23
VTI1B-204ENST00000554659 ZNF773Q6PK81 442 aa13.64□□□□□ -0.23
VTI1B-204ENST00000554659 KLHL36Q8N4N3 616 aa13.64□□□□□ -0.23
VTI1B-204ENST00000554659 FARSBQ9NSD9 589 aaKnown RBP13.64□□□□□ -0.23
VTI1B-204ENST00000554659 ZDHHC3Q9NYG2 299 aa13.64□□□□□ -0.23
VTI1B-204ENST00000554659 ALPPP05187 535 aa13.64□□□□□ -0.23
VTI1B-204ENST00000554659 SPIN4Q56A73 249 aa13.64□□□□□ -0.23
VTI1B-204ENST00000554659 UBXN11Q5T124 520 aa13.64□□□□□ -0.23
VTI1B-204ENST00000554659 EMC10Q5UCC4 262 aa13.64□□□□□ -0.23
VTI1B-204ENST00000554659 SLC2A7Q6PXP3 512 aa13.64□□□□□ -0.23
VTI1B-204ENST00000554659 ZNF366Q8N895 744 aa13.64□□□□□ -0.23
VTI1B-204ENST00000554659 LSM14AQ8ND56 463 aaKnown RBP13.64□□□□□ -0.23
VTI1B-204ENST00000554659 RFT1Q96AA3 541 aa13.64□□□□□ -0.23
VTI1B-204ENST00000554659 C12orf43Q96C57 262 aaKnown RBP13.64□□□□□ -0.23
VTI1B-204ENST00000554659 DERL2Q9GZP9 239 aa13.64□□□□□ -0.23
VTI1B-204ENST00000554659 METTL21EPA6NDL7 271 aa13.63□□□□□ -0.23
VTI1B-204ENST00000554659 CLDN4O14493 209 aa13.63□□□□□ -0.23
VTI1B-204ENST00000554659 FPR1P21462 350 aa13.63□□□□□ -0.23
VTI1B-204ENST00000554659 SYT16Q17RD7 645 aa13.63□□□□□ -0.23
VTI1B-204ENST00000554659 DUOXA1Q1HG43 343 aa13.63□□□□□ -0.23
VTI1B-204ENST00000554659 TPRG1LQ5T0D9 272 aa13.63□□□□□ -0.23
VTI1B-204ENST00000554659 SLC30A6Q6NXT4 461 aa13.63□□□□□ -0.23
VTI1B-204ENST00000554659 MBOAT1Q6ZNC8 495 aa13.63□□□□□ -0.23
VTI1B-204ENST00000554659 SPERTQ8NA61 448 aa13.63□□□□□ -0.23
VTI1B-204ENST00000554659 ZNF420Q8TAQ5 688 aaPredicted RBP13.63□□□□□ -0.23
VTI1B-204ENST00000554659 ZNF514Q96K75 400 aaPredicted RBP13.63□□□□□ -0.23
VTI1B-204ENST00000554659 DAPL1A0PJW8 107 aa13.63□□□□□ -0.23
VTI1B-204ENST00000554659 ZSCAN5BA6NJL1 495 aa13.63□□□□□ -0.23
VTI1B-204ENST00000554659 TLR4O00206 839 aa13.63□□□□□ -0.23
VTI1B-204ENST00000554659 HAS3O00219 553 aa13.63□□□□□ -0.23
VTI1B-204ENST00000554659 CCRL2O00421 344 aa13.63□□□□□ -0.23
VTI1B-204ENST00000554659 S100A2P29034 98 aa13.63□□□□□ -0.23
VTI1B-204ENST00000554659 HSD17B2P37059 387 aa13.63□□□□□ -0.23
VTI1B-204ENST00000554659 GANABQ14697 944 aaKnown RBP13.63□□□□□ -0.23
VTI1B-204ENST00000554659 TNFAIP8L2Q6P589 184 aaPredicted RBP13.63□□□□□ -0.23
VTI1B-204ENST00000554659 PLEKHO2Q8TD55 490 aa13.63□□□□□ -0.23
VTI1B-204ENST00000554659 NKD1Q969G9 470 aa13.63□□□□□ -0.23
VTI1B-204ENST00000554659 ACDQ96AP0 544 aa13.63□□□□□ -0.23
VTI1B-204ENST00000554659 BIRC7Q96CA5 298 aa13.63□□□□□ -0.23
VTI1B-204ENST00000554659 IFT46Q9NQC8 304 aa13.63□□□□□ -0.23
VTI1B-204ENST00000554659 HPF1Q9NWY4 346 aa13.63□□□□□ -0.23
VTI1B-204ENST00000554659 ABCG2Q9UNQ0 655 aa13.63□□□□□ -0.23
VTI1B-204ENST00000554659 A0A0G2JLL6 359 aaPredicted RBP13.63□□□□□ -0.23
VTI1B-204ENST00000554659 ILVBLA1L0T0 632 aa13.63□□□□□ -0.23
VTI1B-204ENST00000554659 GMFGO60234 142 aa13.63□□□□□ -0.23
VTI1B-204ENST00000554659 TPST2O60704 377 aa13.63□□□□□ -0.23
VTI1B-204ENST00000554659 HMGN1P05114 100 aa13.63□□□□□ -0.23
VTI1B-204ENST00000554659 ITGB1P05556 798 aa13.63□□□□□ -0.23
VTI1B-204ENST00000554659 GSTM3P21266 225 aa13.63□□□□□ -0.23
VTI1B-204ENST00000554659 ACSL1P33121 698 aa13.63□□□□□ -0.23
VTI1B-204ENST00000554659 RYKP34925 604 aa13.63□□□□□ -0.23
VTI1B-204ENST00000554659 UBAP2Q5T6F2 1119 aaKnown RBP13.63□□□□□ -0.23
VTI1B-204ENST00000554659 SMARCD3Q6STE5 483 aa13.63□□□□□ -0.23
VTI1B-204ENST00000554659 PRRT2Q7Z6L0 340 aaPredicted RBP13.63□□□□□ -0.23
VTI1B-204ENST00000554659 GPALPP1Q8IXQ4 340 aa13.63□□□□□ -0.23
VTI1B-204ENST00000554659 PQLC3Q8N755 202 aa13.63□□□□□ -0.23
VTI1B-204ENST00000554659 ARL14EPQ8N8R7 260 aaPredicted RBP13.63□□□□□ -0.23
VTI1B-204ENST00000554659 KCNC2Q96PR1 638 aa13.63□□□□□ -0.23
VTI1B-204ENST00000554659 MAPKAP1Q9BPZ7 522 aa13.63□□□□□ -0.23
VTI1B-204ENST00000554659 IFT27Q9BW83 186 aa13.63□□□□□ -0.23
VTI1B-204ENST00000554659 MAFFQ9ULX9 164 aa13.63□□□□□ -0.23
VTI1B-204ENST00000554659 PCDHGB7Q9Y5F8 929 aa13.63□□□□□ -0.23
VTI1B-204ENST00000554659 ANXA2P2A6NMY6 339 aa13.63□□□□□ -0.23
VTI1B-204ENST00000554659 OR2AT4A6NND4 320 aa13.63□□□□□ -0.23
VTI1B-204ENST00000554659 ABCB7O75027 752 aa13.63□□□□□ -0.23
VTI1B-204ENST00000554659 CLPXO76031 633 aa13.63□□□□□ -0.23
VTI1B-204ENST00000554659 ANXA2P07355 339 aaKnown RBP13.63□□□□□ -0.23
VTI1B-204ENST00000554659 CBSLP0DN79 551 aa13.63□□□□□ -0.23
VTI1B-204ENST00000554659 FGF3P11487 239 aaPredicted RBP13.63□□□□□ -0.23
VTI1B-204ENST00000554659 IL7RP16871 459 aa13.63□□□□□ -0.23
VTI1B-204ENST00000554659 ECHS1P30084 290 aa13.63□□□□□ -0.23
VTI1B-204ENST00000554659 CBSP35520 551 aa13.63□□□□□ -0.23
VTI1B-204ENST00000554659 SLC35G1Q2M3R5 365 aa13.63□□□□□ -0.23
VTI1B-204ENST00000554659 FRG2Q64ET8 278 aa13.63□□□□□ -0.23
VTI1B-204ENST00000554659 ZCCHC12Q6PEW1 402 aa13.63□□□□□ -0.23
VTI1B-204ENST00000554659 PYURFQ96I23 114 aa13.63□□□□□ -0.23
VTI1B-204ENST00000554659 FRG2BQ96QU4 278 aa13.63□□□□□ -0.23
VTI1B-204ENST00000554659 SLC35A5Q9BS91 424 aa13.63□□□□□ -0.23
VTI1B-204ENST00000554659 CCDC106Q9BWC9 280 aa13.63□□□□□ -0.23
VTI1B-204ENST00000554659 AMBNQ9NP70 447 aa13.63□□□□□ -0.23
VTI1B-204ENST00000554659 GALPQ9UBC7 116 aa13.63□□□□□ -0.23
VTI1B-204ENST00000554659 SLC2A6Q9UGQ3 507 aa13.63□□□□□ -0.23
VTI1B-204ENST00000554659 SLC2A2P11168 524 aaPredicted RBP13.63□□□□□ -0.23
VTI1B-204ENST00000554659 DSTNP60981 165 aa13.63□□□□□ -0.23
VTI1B-204ENST00000554659 PPP3R1P63098 170 aa13.63□□□□□ -0.23
VTI1B-204ENST00000554659 INCA1Q0VD86 236 aa13.63□□□□□ -0.23
VTI1B-204ENST00000554659 MOGSQ13724 837 aa13.63□□□□□ -0.23
VTI1B-204ENST00000554659 CRB2Q5IJ48 1285 aa13.63□□□□□ -0.23
VTI1B-204ENST00000554659 C6orf183Q5T699 404 aa13.63□□□□□ -0.23
VTI1B-204ENST00000554659 PAMR1Q6UXH9 720 aa13.63□□□□□ -0.23
VTI1B-204ENST00000554659 QSOX2Q6ZRP7 698 aa13.63□□□□□ -0.23
VTI1B-204ENST00000554659 EFHD2Q96C19 240 aaPredicted RBP13.63□□□□□ -0.23
VTI1B-204ENST00000554659 RAB11FIP5Q9BXF6 653 aa13.63□□□□□ -0.23
VTI1B-204ENST00000554659 OR51V1Q9H2C8 321 aa13.63□□□□□ -0.23
VTI1B-204ENST00000554659 PLEKHA1Q9HB21 404 aa13.63□□□□□ -0.23
VTI1B-204ENST00000554659 ZNF639Q9UID6 485 aa13.63□□□□□ -0.23
VTI1B-204ENST00000554659 FBXL21Q9UKT6 434 aa13.63□□□□□ -0.23
VTI1B-204ENST00000554659 OR6C70A6NIJ9 312 aa13.62□□□□□ -0.23
VTI1B-204ENST00000554659 CCL16O15467 120 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms