RNA–Protein interactions for RNA: ENST00000554264.5

VPS33B-203, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-203ENST00000554264 NAPRTQ6XQN6 538 aa5.81□□□□□ -1.48
VPS33B-203ENST00000554264 LIMS2Q7Z4I7 341 aa5.81□□□□□ -1.48
VPS33B-203ENST00000554264 CMC1Q7Z7K0 106 aa5.81□□□□□ -1.48
VPS33B-203ENST00000554264 ACOT1Q86TX2 421 aa5.81□□□□□ -1.48
VPS33B-203ENST00000554264 GPR180Q86V85 440 aa5.81□□□□□ -1.48
VPS33B-203ENST00000554264 GALNT13Q8IUC8 556 aa5.81□□□□□ -1.48
VPS33B-203ENST00000554264 TBC1D21Q8IYX1 336 aa5.81□□□□□ -1.48
VPS33B-203ENST00000554264 TMEM86AQ8N2M4 240 aa5.81□□□□□ -1.48
VPS33B-203ENST00000554264 FSTL5Q8N475 847 aaPredicted RBP5.81□□□□□ -1.48
VPS33B-203ENST00000554264 SPEM1Q8N4L4 309 aa5.81□□□□□ -1.48
VPS33B-203ENST00000554264 TTC30BQ8N4P2 665 aa5.81□□□□□ -1.48
VPS33B-203ENST00000554264 CCDC185Q8N715 623 aa5.81□□□□□ -1.48
VPS33B-203ENST00000554264 ZBTB8BQ8NAP8 495 aaPredicted RBP5.81□□□□□ -1.48
VPS33B-203ENST00000554264 OR52K1Q8NGK4 314 aa5.81□□□□□ -1.48
VPS33B-203ENST00000554264 OR6B3Q8NGW1 331 aa5.81□□□□□ -1.48
VPS33B-203ENST00000554264 MAPK15Q8TD08 544 aa5.81□□□□□ -1.48
VPS33B-203ENST00000554264 RAB2BQ8WUD1 216 aa5.81□□□□□ -1.48
VPS33B-203ENST00000554264 ING5Q8WYH8 240 aa5.81□□□□□ -1.48
VPS33B-203ENST00000554264 PPWD1Q96BP3 646 aaKnown RBP5.81□□□□□ -1.48
VPS33B-203ENST00000554264 AJUBAQ96IF1 538 aa5.81□□□□□ -1.48
VPS33B-203ENST00000554264 CPB2Q96IY4 423 aa5.81□□□□□ -1.48
VPS33B-203ENST00000554264 TEKT5Q96M29 485 aa5.81□□□□□ -1.48
VPS33B-203ENST00000554264 FCRL5Q96RD9 977 aa5.81□□□□□ -1.48
VPS33B-203ENST00000554264 LGMNQ99538 433 aa5.81□□□□□ -1.48
VPS33B-203ENST00000554264 TRMT61BQ9BVS5 477 aaKnown RBP5.81□□□□□ -1.48
VPS33B-203ENST00000554264 DUSP16Q9BY84 665 aa5.81□□□□□ -1.48
VPS33B-203ENST00000554264 PLA2G2FQ9BZM2 168 aa5.81□□□□□ -1.48
VPS33B-203ENST00000554264 UNKQ9C0B0 810 aaKnown RBP5.81□□□□□ -1.48
VPS33B-203ENST00000554264 MS4A5Q9H3V2 200 aa5.81□□□□□ -1.48
VPS33B-203ENST00000554264 LMAN1LQ9HAT1 526 aa5.81□□□□□ -1.48
VPS33B-203ENST00000554264 IARS2Q9NSE4 1012 aaKnown RBP5.81□□□□□ -1.48
VPS33B-203ENST00000554264 INTS10Q9NVR2 710 aaKnown RBP5.81□□□□□ -1.48
VPS33B-203ENST00000554264 HCFC1R1Q9NWW0 138 aa5.81□□□□□ -1.48
VPS33B-203ENST00000554264 ACTR3BQ9P1U1 418 aa5.81□□□□□ -1.48
VPS33B-203ENST00000554264 HSFX1Q9UBD0 423 aa5.81□□□□□ -1.48
VPS33B-203ENST00000554264 XPR1Q9UBH6 696 aa5.81□□□□□ -1.48
VPS33B-203ENST00000554264 CD300AQ9UGN4 299 aa5.81□□□□□ -1.48
VPS33B-203ENST00000554264 ADAM29Q9UKF5 820 aa5.81□□□□□ -1.48
VPS33B-203ENST00000554264 SLC39A10Q9ULF5 831 aa5.81□□□□□ -1.48
VPS33B-203ENST00000554264 MAPRE3Q9UPY8 281 aa5.81□□□□□ -1.48
VPS33B-203ENST00000554264 RUVBL2Q9Y230 463 aaKnown RBP5.81□□□□□ -1.48
VPS33B-203ENST00000554264 INVSQ9Y283 1065 aa5.81□□□□□ -1.48
VPS33B-203ENST00000554264 SNX9Q9Y5X1 595 aa5.81□□□□□ -1.48
VPS33B-203ENST00000554264 PIAS3Q9Y6X2 628 aa5.81□□□□□ -1.48
VPS33B-203ENST00000554264 COL4A3Q01955 1670 aa5.81□□□□□ -1.48
VPS33B-203ENST00000554264 MTCL1Q9Y4B5 1905 aaKnown RBP5.8□□□□□ -1.48
VPS33B-203ENST00000554264 MYO18AQ92614 2054 aaKnown RBP5.8□□□□□ -1.48
VPS33B-203ENST00000554264 A0A1B0GVG6 124 aa5.8□□□□□ -1.48
VPS33B-203ENST00000554264 DHRS12A0PJE2 317 aa5.8□□□□□ -1.48
VPS33B-203ENST00000554264 CASTOR2A6NHX0 329 aa5.8□□□□□ -1.48
VPS33B-203ENST00000554264 PALM2-AKAP2B1ALY0 433 aaPredicted RBP5.8□□□□□ -1.48
VPS33B-203ENST00000554264 M0QYT0 321 aa5.8□□□□□ -1.48
VPS33B-203ENST00000554264 PIRO00625 290 aa5.8□□□□□ -1.48
VPS33B-203ENST00000554264 NEMP1O14524 444 aa5.8□□□□□ -1.48
VPS33B-203ENST00000554264 ZNF197O14709 1029 aa5.8□□□□□ -1.48
VPS33B-203ENST00000554264 ANGPT2O15123 496 aa5.8□□□□□ -1.48
VPS33B-203ENST00000554264 B4GALT5O43286 388 aa5.8□□□□□ -1.48
VPS33B-203ENST00000554264 AKAP10O43572 662 aa5.8□□□□□ -1.48
VPS33B-203ENST00000554264 MRPS14O60783 128 aaKnown RBP5.8□□□□□ -1.48
VPS33B-203ENST00000554264 HUS1O60921 280 aa5.8□□□□□ -1.48
VPS33B-203ENST00000554264 RNASEH2AO75792 299 aaKnown RBP5.8□□□□□ -1.48
VPS33B-203ENST00000554264 RASAL1O95294 804 aa5.8□□□□□ -1.48
VPS33B-203ENST00000554264 CYP17A1P05093 508 aa5.8□□□□□ -1.48
VPS33B-203ENST00000554264 THP07101 528 aa5.8□□□□□ -1.48
VPS33B-203ENST00000554264 FGF4P08620 206 aa5.8□□□□□ -1.48
VPS33B-203ENST00000554264 ZNF888P0CJ79 500 aaPredicted RBP5.8□□□□□ -1.48
VPS33B-203ENST00000554264 KCNE1P15382 129 aa5.8□□□□□ -1.48
VPS33B-203ENST00000554264 ERCC2P18074 760 aa5.8□□□□□ -1.48
VPS33B-203ENST00000554264 IMPDH1P20839 514 aa5.8□□□□□ -1.48
VPS33B-203ENST00000554264 CSF2RBP32927 897 aa5.8□□□□□ -1.48
VPS33B-203ENST00000554264 OR1D2P34982 312 aa5.8□□□□□ -1.48
VPS33B-203ENST00000554264 CAPGP40121 348 aa5.8□□□□□ -1.48
VPS33B-203ENST00000554264 GRIA1P42261 906 aa5.8□□□□□ -1.48
VPS33B-203ENST00000554264 SCNN1BP51168 640 aa5.8□□□□□ -1.48
VPS33B-203ENST00000554264 EEFSECP57772 596 aaKnown RBP5.8□□□□□ -1.48
VPS33B-203ENST00000554264 GABARAPL2P60520 117 aa5.8□□□□□ -1.48
VPS33B-203ENST00000554264 MS4A2Q01362 244 aa5.8□□□□□ -1.48
VPS33B-203ENST00000554264 ALDH6A1Q02252 535 aaKnown RBP5.8□□□□□ -1.48
VPS33B-203ENST00000554264 MERTKQ12866 999 aa5.8□□□□□ -1.48
VPS33B-203ENST00000554264 GRM3Q14832 879 aa5.8□□□□□ -1.48
VPS33B-203ENST00000554264 CYTH1Q15438 398 aa5.8□□□□□ -1.48
VPS33B-203ENST00000554264 ATP6AP1Q15904 470 aa5.8□□□□□ -1.48
VPS33B-203ENST00000554264 SLC36A3Q495N2 470 aa5.8□□□□□ -1.48
VPS33B-203ENST00000554264 BRMS1LQ5PSV4 323 aa5.8□□□□□ -1.48
VPS33B-203ENST00000554264 RBM48Q5RL73 367 aaKnown RBP5.8□□□□□ -1.48
VPS33B-203ENST00000554264 CCNYL2Q5T2Q4 361 aa5.8□□□□□ -1.48
VPS33B-203ENST00000554264 C9orf57Q5W0N0 161 aa5.8□□□□□ -1.48
VPS33B-203ENST00000554264 BSPRYQ5W0U4 402 aa5.8□□□□□ -1.48
VPS33B-203ENST00000554264 NIPAL1Q6NVV3 410 aa5.8□□□□□ -1.48
VPS33B-203ENST00000554264 KLHL35Q6PF15 583 aa5.8□□□□□ -1.48
VPS33B-203ENST00000554264 IYDQ6PHW0 289 aa5.8□□□□□ -1.48
VPS33B-203ENST00000554264 GPR155Q7Z3F1 870 aa5.8□□□□□ -1.48
VPS33B-203ENST00000554264 SPATA19Q7Z5L4 167 aa5.8□□□□□ -1.48
VPS33B-203ENST00000554264 SPRED1Q7Z699 444 aa5.8□□□□□ -1.48
VPS33B-203ENST00000554264 AMIGO2Q86SJ2 522 aa5.8□□□□□ -1.48
VPS33B-203ENST00000554264 CLYBLQ8N0X4 340 aa5.8□□□□□ -1.48
VPS33B-203ENST00000554264 DEFB106AQ8N104 65 aa5.8□□□□□ -1.48
VPS33B-203ENST00000554264 BCL6BQ8N143 479 aaPredicted RBP5.8□□□□□ -1.48
VPS33B-203ENST00000554264 MIER2Q8N344 545 aa5.8□□□□□ -1.48
VPS33B-203ENST00000554264 GALNT4Q8N4A0 578 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms