RNA–Protein interactions for RNA: ENST00000554079.1

SIX4-202, Transcript of SIX homeobox 4, humanhuman

TSL 1 (best)

Gene SIX4, Length 2,003 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-202ENST00000554079 BSPRYQ5W0U4 402 aa9.32□□□□□ -0.92
SIX4-202ENST00000554079 TRNP1Q6NT89 227 aa9.32□□□□□ -0.92
SIX4-202ENST00000554079 ATRAIDQ6UW56 229 aa9.32□□□□□ -0.92
SIX4-202ENST00000554079 ARHGAP36Q6ZRI8 547 aa9.32□□□□□ -0.92
SIX4-202ENST00000554079 USP45Q70EL2 814 aa9.32□□□□□ -0.92
SIX4-202ENST00000554079 ABI3BPQ7Z7G0 1075 aa9.32□□□□□ -0.92
SIX4-202ENST00000554079 C11orf96Q7Z7L8 435 aa9.32□□□□□ -0.92
SIX4-202ENST00000554079 GALNT5Q7Z7M9 940 aa9.32□□□□□ -0.92
SIX4-202ENST00000554079 TMEM135Q86UB9 458 aa9.32□□□□□ -0.92
SIX4-202ENST00000554079 CYP4Z1Q86W10 505 aa9.32□□□□□ -0.92
SIX4-202ENST00000554079 CCDC71Q8IV32 467 aaPredicted RBP9.32□□□□□ -0.92
SIX4-202ENST00000554079 SLC41A1Q8IVJ1 513 aa9.32□□□□□ -0.92
SIX4-202ENST00000554079 ARL6IP6Q8N6S5 226 aa9.32□□□□□ -0.92
SIX4-202ENST00000554079 CEP76Q8TAP6 659 aa9.32□□□□□ -0.92
SIX4-202ENST00000554079 HEXDCQ8WVB3 486 aa9.32□□□□□ -0.92
SIX4-202ENST00000554079 DNASE1L2Q92874 299 aa9.32□□□□□ -0.92
SIX4-202ENST00000554079 RHBDF1Q96CC6 855 aa9.32□□□□□ -0.92
SIX4-202ENST00000554079 SPATA13Q96N96 652 aa9.32□□□□□ -0.92
SIX4-202ENST00000554079 CINPQ9BW66 212 aaPredicted RBP9.32□□□□□ -0.92
SIX4-202ENST00000554079 LRRC3Q9BY71 257 aa9.32□□□□□ -0.92
SIX4-202ENST00000554079 GPR63Q9BZJ6 419 aa9.32□□□□□ -0.92
SIX4-202ENST00000554079 GSX2Q9BZM3 304 aa9.32□□□□□ -0.92
SIX4-202ENST00000554079 GABARAPL1Q9H0R8 117 aa9.32□□□□□ -0.92
SIX4-202ENST00000554079 PIGUQ9H490 435 aa9.32□□□□□ -0.92
SIX4-202ENST00000554079 RIBC2Q9H4K1 309 aa9.32□□□□□ -0.92
SIX4-202ENST00000554079 GSTO2Q9H4Y5 243 aa9.32□□□□□ -0.92
SIX4-202ENST00000554079 GPBP1L1Q9HC44 474 aaPredicted RBP9.32□□□□□ -0.92
SIX4-202ENST00000554079 GPATCH2LQ9NWQ4 482 aa9.32□□□□□ -0.92
SIX4-202ENST00000554079 MIOSQ9NXC5 875 aa9.32□□□□□ -0.92
SIX4-202ENST00000554079 NSMCE4AQ9NXX6 385 aa9.32□□□□□ -0.92
SIX4-202ENST00000554079 CSADQ9Y600 493 aa9.32□□□□□ -0.92
SIX4-202ENST00000554079 E9PQ18 207 aa9.31□□□□□ -0.92
SIX4-202ENST00000554079 PITPNM1O00562 1244 aa9.31□□□□□ -0.92
SIX4-202ENST00000554079 GNB5O14775 395 aa9.31□□□□□ -0.92
SIX4-202ENST00000554079 WDR47O94967 919 aa9.31□□□□□ -0.92
SIX4-202ENST00000554079 TGM6O95932 706 aa9.31□□□□□ -0.92
SIX4-202ENST00000554079 HLA-DQB1P01920 261 aa9.31□□□□□ -0.92
SIX4-202ENST00000554079 TNNC2P02585 160 aa9.31□□□□□ -0.92
SIX4-202ENST00000554079 FHP07954 510 aa9.31□□□□□ -0.92
SIX4-202ENST00000554079 HOXA13P31271 388 aaPredicted RBP9.31□□□□□ -0.92
SIX4-202ENST00000554079 SLC19A1P41440 591 aa9.31□□□□□ -0.92
SIX4-202ENST00000554079 RGS6P49758 472 aa9.31□□□□□ -0.92
SIX4-202ENST00000554079 HK3P52790 923 aa9.31□□□□□ -0.92
SIX4-202ENST00000554079 RAB14P61106 215 aa9.31□□□□□ -0.92
SIX4-202ENST00000554079 ADAM15Q13444 863 aa9.31□□□□□ -0.92
SIX4-202ENST00000554079 CAMK1Q14012 370 aa9.31□□□□□ -0.92
SIX4-202ENST00000554079 RCAN2Q14206 197 aa9.31□□□□□ -0.92
SIX4-202ENST00000554079 ZNF460Q14592 562 aa9.31□□□□□ -0.92
SIX4-202ENST00000554079 MANEALQ5VSG8 457 aa9.31□□□□□ -0.92
SIX4-202ENST00000554079 ALG1LQ6GMV1 187 aa9.31□□□□□ -0.92
SIX4-202ENST00000554079 C5orf46Q6UWT4 87 aa9.31□□□□□ -0.92
SIX4-202ENST00000554079 C17orf107Q6ZR85 190 aa9.31□□□□□ -0.92
SIX4-202ENST00000554079 UBE2J2Q8N2K1 259 aa9.31□□□□□ -0.92
SIX4-202ENST00000554079 MS4A15Q8N5U1 240 aa9.31□□□□□ -0.92
SIX4-202ENST00000554079 ATG16L2Q8NAA4 619 aa9.31□□□□□ -0.92
SIX4-202ENST00000554079 COLGALT1Q8NBJ5 622 aa9.31□□□□□ -0.92
SIX4-202ENST00000554079 SLC37A3Q8NCC5 494 aa9.31□□□□□ -0.92
SIX4-202ENST00000554079 SRFBP1Q8NEF9 429 aaKnown RBP9.31□□□□□ -0.92
SIX4-202ENST00000554079 OR8D4Q8NGM9 314 aa9.31□□□□□ -0.92
SIX4-202ENST00000554079 OR6P1Q8NGX9 317 aa9.31□□□□□ -0.92
SIX4-202ENST00000554079 ZNF675Q8TD23 568 aa9.31□□□□□ -0.92
SIX4-202ENST00000554079 MYDGFQ969H8 173 aa9.31□□□□□ -0.92
SIX4-202ENST00000554079 MYO19Q96H55 970 aa9.31□□□□□ -0.92
SIX4-202ENST00000554079 RAD9AQ99638 391 aa9.31□□□□□ -0.92
SIX4-202ENST00000554079 MARVELD1Q9BSK0 173 aa9.31□□□□□ -0.92
SIX4-202ENST00000554079 WDR11Q9BZH6 1224 aa9.31□□□□□ -0.92
SIX4-202ENST00000554079 ZNF541Q9H0D2 1346 aa9.31□□□□□ -0.92
SIX4-202ENST00000554079 VNN3Q9NY84 501 aa9.31□□□□□ -0.92
SIX4-202ENST00000554079 PTTG3PQ9NZH4 202 aa9.31□□□□□ -0.92
SIX4-202ENST00000554079 SLAMF8Q9P0V8 285 aa9.31□□□□□ -0.92
SIX4-202ENST00000554079 BTRCQ9Y297 605 aa9.31□□□□□ -0.92
SIX4-202ENST00000554079 DERAQ9Y315 318 aa9.31□□□□□ -0.92
SIX4-202ENST00000554079 IRS2Q9Y4H2 1338 aa9.31□□□□□ -0.92
SIX4-202ENST00000554079 A0A096LPI6 279 aa9.31□□□□□ -0.92
SIX4-202ENST00000554079 SOWAHBA6NEL2 793 aa9.31□□□□□ -0.92
SIX4-202ENST00000554079 A8MT66 165 aa9.31□□□□□ -0.92
SIX4-202ENST00000554079 FZD9O00144 591 aa9.31□□□□□ -0.92
SIX4-202ENST00000554079 CBX4O00257 560 aa9.31□□□□□ -0.92
SIX4-202ENST00000554079 CHP2O43745 196 aa9.31□□□□□ -0.92
SIX4-202ENST00000554079 SELENOFO60613 162 aa9.31□□□□□ -0.92
SIX4-202ENST00000554079 EIF1BO60739 113 aaKnown RBP9.31□□□□□ -0.92
SIX4-202ENST00000554079 PSIP1O75475 530 aaKnown RBP9.31□□□□□ -0.92
SIX4-202ENST00000554079 APBA3O96018 575 aa9.31□□□□□ -0.92
SIX4-202ENST00000554079 PLATP00750 562 aa9.31□□□□□ -0.92
SIX4-202ENST00000554079 HSMCR30P0CW71 290 aa9.31□□□□□ -0.92
SIX4-202ENST00000554079 TNNI1P19237 187 aa9.31□□□□□ -0.92
SIX4-202ENST00000554079 C21orf33P30042 268 aaPredicted RBP9.31□□□□□ -0.92
SIX4-202ENST00000554079 EIF1P41567 113 aaKnown RBP9.31□□□□□ -0.92
SIX4-202ENST00000554079 CRISP3P54108 245 aa9.31□□□□□ -0.92
SIX4-202ENST00000554079 BCAT1P54687 386 aa9.31□□□□□ -0.92
SIX4-202ENST00000554079 PUDPQ08623 228 aa9.31□□□□□ -0.92
SIX4-202ENST00000554079 PROX2Q3B8N5 592 aa9.31□□□□□ -0.92
SIX4-202ENST00000554079 SLC26A9Q7LBE3 791 aa9.31□□□□□ -0.92
SIX4-202ENST00000554079 CHMP1BQ7LBR1 199 aa9.31□□□□□ -0.92
SIX4-202ENST00000554079 KRT77Q7Z794 578 aa9.31□□□□□ -0.92
SIX4-202ENST00000554079 KCNMB4Q86W47 210 aa9.31□□□□□ -0.92
SIX4-202ENST00000554079 HIPK1Q86Z02 1210 aa9.31□□□□□ -0.92
SIX4-202ENST00000554079 RNF135Q8IUD6 432 aa9.31□□□□□ -0.92
SIX4-202ENST00000554079 STPG2Q8N412 459 aa9.31□□□□□ -0.92
SIX4-202ENST00000554079 CDYL2Q8N8U2 506 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms