RNA–Protein interactions for RNA: ENST00000553950.5

SHMT2-210, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-210ENST00000553950 ATG10Q9H0Y0 220 aa14.03□□□□□ -0.16
SHMT2-210ENST00000553950 EHD1Q9H4M9 534 aa14.03□□□□□ -0.16
SHMT2-210ENST00000553950 PFDN4Q9NQP4 134 aa14.03□□□□□ -0.16
SHMT2-210ENST00000553950 INTS7Q9NVH2 962 aaKnown RBP14.03□□□□□ -0.16
SHMT2-210ENST00000553950 ANKMY1Q9P2S6 941 aa14.03□□□□□ -0.16
SHMT2-210ENST00000553950 LRIT1Q9P2V4 623 aa14.03□□□□□ -0.16
SHMT2-210ENST00000553950 PADI4Q9UM07 663 aa14.03□□□□□ -0.16
SHMT2-210ENST00000553950 HEATR5BQ9P2D3 2071 aa14.03□□□□□ -0.16
SHMT2-210ENST00000553950 SNRNP200O75643 2136 aaKnown RBP14.02□□□□□ -0.16
SHMT2-210ENST00000553950 TRBV23OR9-2A0A075B6M9 112 aa14.02□□□□□ -0.17
SHMT2-210ENST00000553950 OR5K3A6NET4 321 aa14.02□□□□□ -0.17
SHMT2-210ENST00000553950 SLCO1B7G3V0H7 640 aa14.02□□□□□ -0.17
SHMT2-210ENST00000553950 SNNO75324 88 aaPredicted RBP14.02□□□□□ -0.17
SHMT2-210ENST00000553950 CRCPO75575 148 aa14.02□□□□□ -0.17
SHMT2-210ENST00000553950 UBXN7O94888 489 aa14.02□□□□□ -0.17
SHMT2-210ENST00000553950 ESRRBO95718 433 aa14.02□□□□□ -0.17
SHMT2-210ENST00000553950 CHEK2O96017 543 aa14.02□□□□□ -0.17
SHMT2-210ENST00000553950 CHRM5P08912 532 aaPredicted RBP14.02□□□□□ -0.17
SHMT2-210ENST00000553950 EBLN1P0CF75 366 aa14.02□□□□□ -0.17
SHMT2-210ENST00000553950 AMD1P17707 334 aa14.02□□□□□ -0.17
SHMT2-210ENST00000553950 CMPK1P30085 196 aa14.02□□□□□ -0.17
SHMT2-210ENST00000553950 PCDH1Q08174 1060 aa14.02□□□□□ -0.17
SHMT2-210ENST00000553950 LAPTM5Q13571 262 aa14.02□□□□□ -0.17
SHMT2-210ENST00000553950 CLPPQ16740 277 aaPredicted RBP14.02□□□□□ -0.17
SHMT2-210ENST00000553950 SLC5A12Q1EHB4 618 aa14.02□□□□□ -0.17
SHMT2-210ENST00000553950 GGTA1PQ4G0N0 100 aa14.02□□□□□ -0.17
SHMT2-210ENST00000553950 PAGE2BQ5JRK9 111 aa14.02□□□□□ -0.17
SHMT2-210ENST00000553950 GPRIN3Q6ZVF9 776 aa14.02□□□□□ -0.17
SHMT2-210ENST00000553950 LRRC56Q8IYG6 542 aaPredicted RBP14.02□□□□□ -0.17
SHMT2-210ENST00000553950 TBC1D19Q8N5T2 526 aa14.02□□□□□ -0.17
SHMT2-210ENST00000553950 EID2Q8N6I1 236 aa14.02□□□□□ -0.17
SHMT2-210ENST00000553950 OR4E2Q8NGC2 313 aa14.02□□□□□ -0.17
SHMT2-210ENST00000553950 SLC5A11Q8WWX8 675 aa14.02□□□□□ -0.17
SHMT2-210ENST00000553950 AHCYL2Q96HN2 611 aaKnown RBP14.02□□□□□ -0.17
SHMT2-210ENST00000553950 APOLD1Q96LR9 279 aa14.02□□□□□ -0.17
SHMT2-210ENST00000553950 CD180Q99467 661 aa14.02□□□□□ -0.17
SHMT2-210ENST00000553950 DPYSL5Q9BPU6 564 aa14.02□□□□□ -0.17
SHMT2-210ENST00000553950 SIKE1Q9BRV8 207 aa14.02□□□□□ -0.17
SHMT2-210ENST00000553950 EFCAB11Q9BUY7 163 aa14.02□□□□□ -0.17
SHMT2-210ENST00000553950 NTMT1Q9BV86 223 aa14.02□□□□□ -0.17
SHMT2-210ENST00000553950 PITHD1Q9GZP4 211 aaPredicted RBP14.02□□□□□ -0.17
SHMT2-210ENST00000553950 RAB33BQ9H082 229 aa14.02□□□□□ -0.17
SHMT2-210ENST00000553950 ILKAPQ9H0C8 392 aaPredicted RBP14.02□□□□□ -0.17
SHMT2-210ENST00000553950 IPPKQ9H8X2 491 aa14.02□□□□□ -0.17
SHMT2-210ENST00000553950 FAM86C1Q9NVL1 165 aa14.02□□□□□ -0.17
SHMT2-210ENST00000553950 KCNK4Q9NYG8 393 aa14.02□□□□□ -0.17
SHMT2-210ENST00000553950 TRPS1Q9UHF7 1281 aa14.02□□□□□ -0.17
SHMT2-210ENST00000553950 HAO1Q9UJM8 370 aa14.02□□□□□ -0.17
SHMT2-210ENST00000553950 SLC22A14Q9Y267 594 aa14.02□□□□□ -0.17
SHMT2-210ENST00000553950 RAP2CQ9Y3L5 183 aa14.02□□□□□ -0.17
SHMT2-210ENST00000553950 GSAPA4D1B5 854 aa14.01□□□□□ -0.17
SHMT2-210ENST00000553950 ISM1B1AKI9 464 aa14.01□□□□□ -0.17
SHMT2-210ENST00000553950 TRIM38O00635 465 aa14.01□□□□□ -0.17
SHMT2-210ENST00000553950 SIGLEC6O43699 453 aa14.01□□□□□ -0.17
SHMT2-210ENST00000553950 PROS1P07225 676 aa14.01□□□□□ -0.17
SHMT2-210ENST00000553950 CKMT1AP12532 417 aa14.01□□□□□ -0.17
SHMT2-210ENST00000553950 CXCR2P25025 360 aa14.01□□□□□ -0.17
SHMT2-210ENST00000553950 LSP1P33241 339 aa14.01□□□□□ -0.17
SHMT2-210ENST00000553950 HNF4AP41235 474 aa14.01□□□□□ -0.17
SHMT2-210ENST00000553950 PPM1FP49593 454 aaPredicted RBP14.01□□□□□ -0.17
SHMT2-210ENST00000553950 OCRLQ01968 901 aa14.01□□□□□ -0.17
SHMT2-210ENST00000553950 SF3A2Q15428 464 aaKnown RBP14.01□□□□□ -0.17
SHMT2-210ENST00000553950 TBCCQ15814 346 aa14.01□□□□□ -0.17
SHMT2-210ENST00000553950 ARL13AQ5H913 290 aaPredicted RBP14.01□□□□□ -0.17
SHMT2-210ENST00000553950 LIPJQ5W064 366 aa14.01□□□□□ -0.17
SHMT2-210ENST00000553950 ICE2Q659A1 982 aa14.01□□□□□ -0.17
SHMT2-210ENST00000553950 DBX2Q6ZNG2 339 aa14.01□□□□□ -0.17
SHMT2-210ENST00000553950 LINC01555Q8NAE3 123 aa14.01□□□□□ -0.17
SHMT2-210ENST00000553950 PPFIBP2Q8ND30 876 aa14.01□□□□□ -0.17
SHMT2-210ENST00000553950 OR2I1PQ8NGU4 316 aa14.01□□□□□ -0.17
SHMT2-210ENST00000553950 WDR48Q8TAF3 677 aa14.01□□□□□ -0.17
SHMT2-210ENST00000553950 AGAP11Q8TF27 550 aa14.01□□□□□ -0.17
SHMT2-210ENST00000553950 UBE2E3Q969T4 207 aa14.01□□□□□ -0.17
SHMT2-210ENST00000553950 PYCR2Q96C36 320 aa14.01□□□□□ -0.17
SHMT2-210ENST00000553950 REPS1Q96D71 796 aa14.01□□□□□ -0.17
SHMT2-210ENST00000553950 PTCD3Q96EY7 689 aaKnown RBP14.01□□□□□ -0.17
SHMT2-210ENST00000553950 CHMP6Q96FZ7 201 aa14.01□□□□□ -0.17
SHMT2-210ENST00000553950 PITPNM3Q9BZ71 974 aa14.01□□□□□ -0.17
SHMT2-210ENST00000553950 SLC29A3Q9BZD2 475 aa14.01□□□□□ -0.17
SHMT2-210ENST00000553950 TWSG1Q9GZX9 223 aa14.01□□□□□ -0.17
SHMT2-210ENST00000553950 XKR8Q9H6D3 395 aa14.01□□□□□ -0.17
SHMT2-210ENST00000553950 NOL11Q9H8H0 719 aaKnown RBP14.01□□□□□ -0.17
SHMT2-210ENST00000553950 ACTR8Q9H981 624 aa14.01□□□□□ -0.17
SHMT2-210ENST00000553950 PELI2Q9HAT8 420 aa14.01□□□□□ -0.17
SHMT2-210ENST00000553950 SEMA4BQ9NPR2 832 aaPredicted RBP14.01□□□□□ -0.17
SHMT2-210ENST00000553950 ACTR10Q9NZ32 417 aa14.01□□□□□ -0.17
SHMT2-210ENST00000553950 FTSJ1Q9UET6 329 aa14.01□□□□□ -0.17
SHMT2-210ENST00000553950 CIDEBQ9UHD4 219 aa14.01□□□□□ -0.17
SHMT2-210ENST00000553950 TAC3Q9UHF0 121 aa14.01□□□□□ -0.17
SHMT2-210ENST00000553950 ADAM21Q9UKJ8 722 aa14.01□□□□□ -0.17
SHMT2-210ENST00000553950 RNF215Q9Y6U7 377 aa14.01□□□□□ -0.17
SHMT2-210ENST00000553950 GPR179Q6PRD1 2367 aa14.01□□□□□ -0.17
SHMT2-210ENST00000553950 USP34Q70CQ2 3546 aa14□□□□□ -0.17
SHMT2-210ENST00000553950 EME2A4GXA9 379 aaPredicted RBP14□□□□□ -0.17
SHMT2-210ENST00000553950 KRT87PA6NCN2 255 aa14□□□□□ -0.17
SHMT2-210ENST00000553950 OR6C74A6NCV1 312 aa14□□□□□ -0.17
SHMT2-210ENST00000553950 TCP11X1B4DZS4 312 aa14□□□□□ -0.17
SHMT2-210ENST00000553950 PPM1DO15297 605 aa14□□□□□ -0.17
SHMT2-210ENST00000553950 SHOX2O60902 331 aaPredicted RBP14□□□□□ -0.17
SHMT2-210ENST00000553950 CLDN9O95484 217 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms