RNA–Protein interactions for RNA: ENST00000553619.1

VTI1B-202, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-202ENST00000553619 DHRS4L1P0CG22 281 aa4.89□□□□□ -1.63
VTI1B-202ENST00000553619 CTSEP14091 401 aa4.89□□□□□ -1.63
VTI1B-202ENST00000553619 SLC2A4P14672 509 aa4.89□□□□□ -1.63
VTI1B-202ENST00000553619 GNSP15586 552 aa4.89□□□□□ -1.63
VTI1B-202ENST00000553619 ZNF8P17098 575 aaPredicted RBP4.89□□□□□ -1.63
VTI1B-202ENST00000553619 ITGB6P18564 788 aa4.89□□□□□ -1.63
VTI1B-202ENST00000553619 IMPDH1P20839 514 aa4.89□□□□□ -1.63
VTI1B-202ENST00000553619 NDUFS1P28331 727 aa4.89□□□□□ -1.63
VTI1B-202ENST00000553619 CD38P28907 300 aa4.89□□□□□ -1.63
VTI1B-202ENST00000553619 CCR7P32248 378 aa4.89□□□□□ -1.63
VTI1B-202ENST00000553619 ETV4P43268 484 aa4.89□□□□□ -1.63
VTI1B-202ENST00000553619 HNMTP50135 292 aa4.89□□□□□ -1.63
VTI1B-202ENST00000553619 CLCNKAP51800 687 aa4.89□□□□□ -1.63
VTI1B-202ENST00000553619 AP1S2P56377 157 aa4.89□□□□□ -1.63
VTI1B-202ENST00000553619 CORO7P57737 925 aa4.89□□□□□ -1.63
VTI1B-202ENST00000553619 DNAJB13P59910 316 aa4.89□□□□□ -1.63
VTI1B-202ENST00000553619 KRTAP10-2P60368 255 aa4.89□□□□□ -1.63
VTI1B-202ENST00000553619 PFN3P60673 137 aa4.89□□□□□ -1.63
VTI1B-202ENST00000553619 GNGT1P63211 74 aa4.89□□□□□ -1.63
VTI1B-202ENST00000553619 RACK1P63244 317 aaKnown RBP4.89□□□□□ -1.63
VTI1B-202ENST00000553619 CBX1P83916 185 aa4.89□□□□□ -1.63
VTI1B-202ENST00000553619 ARHGAP8P85298 464 aa4.89□□□□□ -1.63
VTI1B-202ENST00000553619 CDKL1Q00532 357 aa4.89□□□□□ -1.63
VTI1B-202ENST00000553619 B4GALNT1Q00973 533 aa4.89□□□□□ -1.63
VTI1B-202ENST00000553619 PPARDQ03181 441 aa4.89□□□□□ -1.63
VTI1B-202ENST00000553619 CSTF1Q05048 431 aaKnown RBP4.89□□□□□ -1.63
VTI1B-202ENST00000553619 HSPA14Q0VDF9 509 aa4.89□□□□□ -1.63
VTI1B-202ENST00000553619 STX3Q13277 289 aa4.89□□□□□ -1.63
VTI1B-202ENST00000553619 SP140Q13342 867 aa4.89□□□□□ -1.63
VTI1B-202ENST00000553619 BOP1Q14137 746 aaKnown RBP4.89□□□□□ -1.63
VTI1B-202ENST00000553619 FGL2Q14314 439 aa4.89□□□□□ -1.63
VTI1B-202ENST00000553619 NFATC4Q14934 902 aa4.89□□□□□ -1.63
VTI1B-202ENST00000553619 PDK4Q16654 411 aa4.89□□□□□ -1.63
VTI1B-202ENST00000553619 CFAP157Q5JU67 520 aa4.89□□□□□ -1.63
VTI1B-202ENST00000553619 LIPMQ5VYY2 423 aa4.89□□□□□ -1.63
VTI1B-202ENST00000553619 SULT1C3Q6IMI6 304 aa4.89□□□□□ -1.63
VTI1B-202ENST00000553619 METTL2BQ6P1Q9 378 aaKnown RBP4.89□□□□□ -1.63
VTI1B-202ENST00000553619 ZYG11AQ6WRX3 759 aa4.89□□□□□ -1.63
VTI1B-202ENST00000553619 CYHR1Q6ZMK1 362 aa4.89□□□□□ -1.63
VTI1B-202ENST00000553619 RGS9BPQ6ZS82 235 aa4.89□□□□□ -1.63
VTI1B-202ENST00000553619 Q6ZSR6 202 aa4.89□□□□□ -1.63
VTI1B-202ENST00000553619 DET1Q7L5Y6 550 aa4.89□□□□□ -1.63
VTI1B-202ENST00000553619 RABEPKQ7Z6M1 372 aa4.89□□□□□ -1.63
VTI1B-202ENST00000553619 CPLX4Q7Z7G2 160 aa4.89□□□□□ -1.63
VTI1B-202ENST00000553619 ISCA2Q86U28 154 aa4.89□□□□□ -1.63
VTI1B-202ENST00000553619 FAM129CQ86XR2 697 aa4.89□□□□□ -1.63
VTI1B-202ENST00000553619 GALNT13Q8IUC8 556 aa4.89□□□□□ -1.63
VTI1B-202ENST00000553619 CFAP206Q8IYR0 622 aa4.89□□□□□ -1.63
VTI1B-202ENST00000553619 CENPLQ8N0S6 344 aaPredicted RBP4.89□□□□□ -1.63
VTI1B-202ENST00000553619 TCAIMQ8N3R3 496 aa4.89□□□□□ -1.63
VTI1B-202ENST00000553619 SDR16C5Q8N3Y7 309 aa4.89□□□□□ -1.63
VTI1B-202ENST00000553619 AFAP1L2Q8N4X5 818 aa4.89□□□□□ -1.63
VTI1B-202ENST00000553619 RAB42Q8N4Z0 105 aa4.89□□□□□ -1.63
VTI1B-202ENST00000553619 SYT8Q8NBV8 401 aa4.89□□□□□ -1.63
VTI1B-202ENST00000553619 PLA2G15Q8NCC3 412 aa4.89□□□□□ -1.63
VTI1B-202ENST00000553619 ADCY4Q8NFM4 1077 aa4.89□□□□□ -1.63
VTI1B-202ENST00000553619 OR56A4Q8NGH8 313 aa4.89□□□□□ -1.63
VTI1B-202ENST00000553619 MDM1Q8TC05 714 aa4.89□□□□□ -1.63
VTI1B-202ENST00000553619 CD200R1Q8TD46 325 aa4.89□□□□□ -1.63
VTI1B-202ENST00000553619 SKA2Q8WVK7 121 aaPredicted RBP4.89□□□□□ -1.63
VTI1B-202ENST00000553619 RLN3Q8WXF3 142 aa4.89□□□□□ -1.63
VTI1B-202ENST00000553619 ATL1Q8WXF7 558 aa4.89□□□□□ -1.63
VTI1B-202ENST00000553619 SNX19Q92543 992 aa4.89□□□□□ -1.63
VTI1B-202ENST00000553619 ZNF75CPQ92670 426 aaPredicted RBP4.89□□□□□ -1.63
VTI1B-202ENST00000553619 FUBP1Q96AE4 644 aaKnown RBP4.89□□□□□ -1.63
VTI1B-202ENST00000553619 BIRC7Q96CA5 298 aa4.89□□□□□ -1.63
VTI1B-202ENST00000553619 LINGO1Q96FE5 620 aa4.89□□□□□ -1.63
VTI1B-202ENST00000553619 CNDP1Q96KN2 507 aa4.89□□□□□ -1.63
VTI1B-202ENST00000553619 BMFQ96LC9 184 aa4.89□□□□□ -1.63
VTI1B-202ENST00000553619 TIMM29Q9BSF4 260 aa4.89□□□□□ -1.63
VTI1B-202ENST00000553619 C1QTNF1Q9BXJ1 281 aa4.89□□□□□ -1.63
VTI1B-202ENST00000553619 SLC12A9Q9BXP2 914 aa4.89□□□□□ -1.63
VTI1B-202ENST00000553619 C6orf106Q9H6K1 298 aaPredicted RBP4.89□□□□□ -1.63
VTI1B-202ENST00000553619 PARVBQ9HBI1 364 aa4.89□□□□□ -1.63
VTI1B-202ENST00000553619 PFDN4Q9NQP4 134 aa4.89□□□□□ -1.63
VTI1B-202ENST00000553619 AASDHPPTQ9NRN7 309 aa4.89□□□□□ -1.63
VTI1B-202ENST00000553619 IGSF5Q9NSI5 407 aa4.89□□□□□ -1.63
VTI1B-202ENST00000553619 THAP1Q9NVV9 213 aa4.89□□□□□ -1.63
VTI1B-202ENST00000553619 TRNAU1APQ9NX07 287 aaKnown RBP4.89□□□□□ -1.63
VTI1B-202ENST00000553619 NCKIPSDQ9NZQ3 722 aa4.89□□□□□ -1.63
VTI1B-202ENST00000553619 CD274Q9NZQ7 290 aa4.89□□□□□ -1.63
VTI1B-202ENST00000553619 DLGAP2Q9P1A6 1054 aa4.89□□□□□ -1.63
VTI1B-202ENST00000553619 SLC17A7Q9P2U7 560 aa4.89□□□□□ -1.63
VTI1B-202ENST00000553619 KLQ9UEF7 1012 aa4.89□□□□□ -1.63
VTI1B-202ENST00000553619 SUSD2Q9UGT4 822 aa4.89□□□□□ -1.63
VTI1B-202ENST00000553619 SLC17A4Q9Y2C5 497 aa4.89□□□□□ -1.63
VTI1B-202ENST00000553619 EPB41L3Q9Y2J2 1087 aaPredicted RBP4.89□□□□□ -1.63
VTI1B-202ENST00000553619 TMEM98Q9Y2Y6 226 aa4.89□□□□□ -1.63
VTI1B-202ENST00000553619 HEBP2Q9Y5Z4 205 aa4.89□□□□□ -1.63
VTI1B-202ENST00000553619 COLEC10Q9Y6Z7 277 aa4.89□□□□□ -1.63
VTI1B-202ENST00000553619 PCM1Q15154 2024 aa4.89□□□□□ -1.63
VTI1B-202ENST00000553619 MKI67P46013 3256 aaKnown RBP4.89□□□□□ -1.63
VTI1B-202ENST00000553619 ANKRD12Q6UB98 2062 aa4.88□□□□□ -1.63
VTI1B-202ENST00000553619 PLXND1Q9Y4D7 1925 aa4.88□□□□□ -1.63
VTI1B-202ENST00000553619 THADAQ6YHU6 1953 aa4.88□□□□□ -1.63
VTI1B-202ENST00000553619 TRBV23OR9-2A0A075B6M9 112 aa4.88□□□□□ -1.63
VTI1B-202ENST00000553619 SLC5A10A0PJK1 596 aa4.88□□□□□ -1.63
VTI1B-202ENST00000553619 PRSS38A1L453 326 aa4.88□□□□□ -1.63
VTI1B-202ENST00000553619 WDR91A4D1P6 747 aa4.88□□□□□ -1.63
VTI1B-202ENST00000553619 POM121BA6NF01 834 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms