RNA–Protein interactions for RNA: ENST00000553186.5

RBFOX1-215, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-215ENST00000553186 ZNF217O75362 1048 aa18.93■□□□□ 0.62
RBFOX1-215ENST00000553186 IDSP22304 550 aa18.93■□□□□ 0.62
RBFOX1-215ENST00000553186 RAP1GDS1P52306 607 aa18.93■□□□□ 0.62
RBFOX1-215ENST00000553186 ARHGAP19Q14CB8 494 aa18.93■□□□□ 0.62
RBFOX1-215ENST00000553186 RPS6KA2Q15349 733 aa18.93■□□□□ 0.62
RBFOX1-215ENST00000553186 GRHL2Q6ISB3 625 aa18.93■□□□□ 0.62
RBFOX1-215ENST00000553186 Q6ZSR6 202 aa18.93■□□□□ 0.62
RBFOX1-215ENST00000553186 DEFB107AQ8IZN7 70 aa18.93■□□□□ 0.62
RBFOX1-215ENST00000553186 DSELQ8IZU8 1212 aa18.93■□□□□ 0.62
RBFOX1-215ENST00000553186 FAM160A2Q8N612 972 aaPredicted RBP18.93■□□□□ 0.62
RBFOX1-215ENST00000553186 WDR20Q8TBZ3 569 aa18.93■□□□□ 0.62
RBFOX1-215ENST00000553186 TSACCQ96A04 125 aaPredicted RBP18.93■□□□□ 0.62
RBFOX1-215ENST00000553186 SLC45A3Q96JT2 553 aa18.93■□□□□ 0.62
RBFOX1-215ENST00000553186 NPAS2Q99743 824 aa18.93■□□□□ 0.62
RBFOX1-215ENST00000553186 SLC25A23Q9BV35 468 aa18.93■□□□□ 0.62
RBFOX1-215ENST00000553186 CCDC177Q9NQR7 707 aaPredicted RBP18.93■□□□□ 0.62
RBFOX1-215ENST00000553186 PRDM8Q9NQV8 689 aa18.93■□□□□ 0.62
RBFOX1-215ENST00000553186 IGHV1OR15-9A0A0B4J2B8 117 aa18.92■□□□□ 0.62
RBFOX1-215ENST00000553186 H0YIV9 168 aa18.92■□□□□ 0.62
RBFOX1-215ENST00000553186 CLGNO14967 610 aa18.92■□□□□ 0.62
RBFOX1-215ENST00000553186 HNF4AP41235 474 aa18.92■□□□□ 0.62
RBFOX1-215ENST00000553186 ZFP36L2P47974 494 aaKnown RBP18.92■□□□□ 0.62
RBFOX1-215ENST00000553186 STX5Q13190 355 aa18.92■□□□□ 0.62
RBFOX1-215ENST00000553186 KIAA0040Q15053 153 aa18.92■□□□□ 0.62
RBFOX1-215ENST00000553186 CYP2A13Q16696 494 aa18.92■□□□□ 0.62
RBFOX1-215ENST00000553186 SMU1Q2TAY7 513 aa18.92■□□□□ 0.62
RBFOX1-215ENST00000553186 UAP1L1Q3KQV9 507 aa18.92■□□□□ 0.62
RBFOX1-215ENST00000553186 PDCD4Q53EL6 469 aaKnown RBP18.92■□□□□ 0.62
RBFOX1-215ENST00000553186 ULK2Q8IYT8 1036 aa18.92■□□□□ 0.62
RBFOX1-215ENST00000553186 ARHGAP24Q8N264 748 aa18.92■□□□□ 0.62
RBFOX1-215ENST00000553186 WDR34Q96EX3 536 aa18.92■□□□□ 0.62
RBFOX1-215ENST00000553186 SLC52A3Q9NQ40 469 aa18.92■□□□□ 0.62
RBFOX1-215ENST00000553186 DMTF1Q9Y222 760 aa18.92■□□□□ 0.62
RBFOX1-215ENST00000553186 TOR1BO14657 336 aa18.92■□□□□ 0.62
RBFOX1-215ENST00000553186 VARSP26640 1264 aaKnown RBP18.92■□□□□ 0.62
RBFOX1-215ENST00000553186 IMPG1Q17R60 797 aa18.92■□□□□ 0.62
RBFOX1-215ENST00000553186 IL23RQ5VWK5 629 aa18.92■□□□□ 0.62
RBFOX1-215ENST00000553186 SCUBE1Q8IWY4 988 aa18.92■□□□□ 0.62
RBFOX1-215ENST00000553186 MAFAQ8NHW3 353 aaPredicted RBP18.92■□□□□ 0.62
RBFOX1-215ENST00000553186 ORAI3Q9BRQ5 295 aa18.92■□□□□ 0.62
RBFOX1-215ENST00000553186 DENND2DQ9H6A0 471 aaPredicted RBP18.92■□□□□ 0.62
RBFOX1-215ENST00000553186 TBC1D17Q9HA65 648 aa18.92■□□□□ 0.62
RBFOX1-215ENST00000553186 LRTM1Q9HBL6 345 aa18.92■□□□□ 0.62
RBFOX1-215ENST00000553186 NOP53Q9NZM5 478 aaKnown RBP18.92■□□□□ 0.62
RBFOX1-215ENST00000553186 ZBTB32Q9Y2Y4 487 aaPredicted RBP18.92■□□□□ 0.62
RBFOX1-215ENST00000553186 OR52A4PA6NMU1 304 aa18.91■□□□□ 0.62
RBFOX1-215ENST00000553186 NPIPB8E9PQR5 432 aa18.91■□□□□ 0.62
RBFOX1-215ENST00000553186 PI15O43692 258 aa18.91■□□□□ 0.62
RBFOX1-215ENST00000553186 G6PDP11413 515 aa18.91■□□□□ 0.62
RBFOX1-215ENST00000553186 SLC2A4P14672 509 aa18.91■□□□□ 0.62
RBFOX1-215ENST00000553186 PRPH2P23942 346 aa18.91■□□□□ 0.62
RBFOX1-215ENST00000553186 THOP1P52888 689 aa18.91■□□□□ 0.62
RBFOX1-215ENST00000553186 UFM1P61960 85 aa18.91■□□□□ 0.62
RBFOX1-215ENST00000553186 RPL38P63173 70 aaKnown RBP18.91■□□□□ 0.62
RBFOX1-215ENST00000553186 ZNF33BQ06732 778 aa18.91■□□□□ 0.62
RBFOX1-215ENST00000553186 RIPK1Q13546 671 aa18.91■□□□□ 0.62
RBFOX1-215ENST00000553186 TSTA3Q13630 321 aaPredicted RBP18.91■□□□□ 0.62
RBFOX1-215ENST00000553186 ALG11Q2TAA5 492 aa18.91■□□□□ 0.62
RBFOX1-215ENST00000553186 CATSPEREQ5SY80 951 aa18.91■□□□□ 0.62
RBFOX1-215ENST00000553186 BLOC1S3Q6QNY0 202 aa18.91■□□□□ 0.62
RBFOX1-215ENST00000553186 SLC22A18ASQ8N1D0 253 aa18.91■□□□□ 0.62
RBFOX1-215ENST00000553186 OR13H1Q8NG92 308 aa18.91■□□□□ 0.62
RBFOX1-215ENST00000553186 PROKR1Q8TCW9 393 aa18.91■□□□□ 0.62
RBFOX1-215ENST00000553186 SETD7Q8WTS6 366 aaKnown RBP18.91■□□□□ 0.62
RBFOX1-215ENST00000553186 CLDN23Q96B33 292 aa18.91■□□□□ 0.62
RBFOX1-215ENST00000553186 FERD3LQ96RJ6 166 aa18.91■□□□□ 0.62
RBFOX1-215ENST00000553186 MRPL1Q9BYD6 325 aaKnown RBP18.91■□□□□ 0.62
RBFOX1-215ENST00000553186 CHRDQ9H2X0 955 aa18.91■□□□□ 0.62
RBFOX1-215ENST00000553186 ACTL8Q9H568 366 aa18.91■□□□□ 0.62
RBFOX1-215ENST00000553186 IMP3Q9NV31 184 aaKnown RBP18.91■□□□□ 0.62
RBFOX1-215ENST00000553186 C1orf109Q9NX04 203 aa18.91■□□□□ 0.62
RBFOX1-215ENST00000553186 ZIM2Q9NZV7 527 aa18.91■□□□□ 0.62
RBFOX1-215ENST00000553186 VCANP13611 3396 aa18.91■□□□□ 0.62
RBFOX1-215ENST00000553186 PDZK1P1A8MUH7 402 aa18.91■□□□□ 0.62
RBFOX1-215ENST00000553186 C9JVG2 144 aa18.91■□□□□ 0.62
RBFOX1-215ENST00000553186 ANKRD28O15084 1053 aa18.91■□□□□ 0.62
RBFOX1-215ENST00000553186 NRP2O60462 931 aa18.91■□□□□ 0.62
RBFOX1-215ENST00000553186 CAPN3P20807 821 aa18.91■□□□□ 0.62
RBFOX1-215ENST00000553186 CCND1P24385 295 aa18.91■□□□□ 0.62
RBFOX1-215ENST00000553186 HSD17B2P37059 387 aa18.91■□□□□ 0.62
RBFOX1-215ENST00000553186 SRP54P61011 504 aaKnown RBP18.91■□□□□ 0.62
RBFOX1-215ENST00000553186 CTBSQ01459 385 aa18.91■□□□□ 0.62
RBFOX1-215ENST00000553186 LRP8Q14114 963 aa18.91■□□□□ 0.62
RBFOX1-215ENST00000553186 REP15Q6BDI9 236 aa18.91■□□□□ 0.62
RBFOX1-215ENST00000553186 PGM2L1Q6PCE3 622 aa18.91■□□□□ 0.62
RBFOX1-215ENST00000553186 RD3Q7Z3Z2 195 aa18.91■□□□□ 0.62
RBFOX1-215ENST00000553186 TMPRSS11BQ86T26 416 aa18.91■□□□□ 0.62
RBFOX1-215ENST00000553186 ZFAND4Q86XD8 727 aa18.91■□□□□ 0.62
RBFOX1-215ENST00000553186 C2orf73Q8N5S3 287 aaPredicted RBP18.91■□□□□ 0.62
RBFOX1-215ENST00000553186 SCHIP1Q9P0W5 487 aaPredicted RBP18.91■□□□□ 0.62
RBFOX1-215ENST00000553186 SPATA7Q9P0W8 599 aa18.91■□□□□ 0.62
RBFOX1-215ENST00000553186 TBC1D29Q9UFV1 150 aa18.91■□□□□ 0.62
RBFOX1-215ENST00000553186 SLC7A8Q9UHI5 535 aa18.91■□□□□ 0.62
RBFOX1-215ENST00000553186 A0A1W2PPC4 97 aa18.9■□□□□ 0.62
RBFOX1-215ENST00000553186 SLC22A3O75751 556 aa18.9■□□□□ 0.62
RBFOX1-215ENST00000553186 RSL1D1O76021 490 aaKnown RBP18.9■□□□□ 0.62
RBFOX1-215ENST00000553186 AK4P27144 223 aaPredicted RBP18.9■□□□□ 0.62
RBFOX1-215ENST00000553186 RABIFP47224 123 aa18.9■□□□□ 0.62
RBFOX1-215ENST00000553186 PXNP49023 591 aaPredicted RBP18.9■□□□□ 0.62
RBFOX1-215ENST00000553186 ART3Q13508 389 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms