RNA–Protein interactions for RNA: ENST00000552301.1

PRPF40B-216, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 912 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-216ENST00000552301 ZNF480Q8WV37 535 aa17.79■□□□□ 0.44
PRPF40B-216ENST00000552301 CRELD1Q96HD1 420 aa17.79■□□□□ 0.44
PRPF40B-216ENST00000552301 CCDC138Q96M89 665 aa17.79■□□□□ 0.44
PRPF40B-216ENST00000552301 SLC12A9Q9BXP2 914 aa17.79■□□□□ 0.44
PRPF40B-216ENST00000552301 SPRY4Q9C004 299 aa17.79■□□□□ 0.44
PRPF40B-216ENST00000552301 GPN2Q9H9Y4 310 aaPredicted RBP17.79■□□□□ 0.44
PRPF40B-216ENST00000552301 POPDC3Q9HBV1 291 aa17.79■□□□□ 0.44
PRPF40B-216ENST00000552301 GPAMQ9HCL2 828 aa17.79■□□□□ 0.44
PRPF40B-216ENST00000552301 FAM60AQ9NP50 221 aa17.79■□□□□ 0.44
PRPF40B-216ENST00000552301 ABCF3Q9NUQ8 709 aa17.79■□□□□ 0.44
PRPF40B-216ENST00000552301 NINJ2Q9NZG7 142 aa17.79■□□□□ 0.44
PRPF40B-216ENST00000552301 ADAMTS6Q9UKP5 1117 aa17.79■□□□□ 0.44
PRPF40B-216ENST00000552301 PLCL2Q9UPR0 1127 aa17.79■□□□□ 0.44
PRPF40B-216ENST00000552301 KLHL20Q9Y2M5 609 aa17.79■□□□□ 0.44
PRPF40B-216ENST00000552301 TEX51A0A1B0GUA7 166 aa17.78■□□□□ 0.44
PRPF40B-216ENST00000552301 OR2B3O76000 313 aa17.78■□□□□ 0.44
PRPF40B-216ENST00000552301 TSPAN12O95859 305 aa17.78■□□□□ 0.44
PRPF40B-216ENST00000552301 ZNF460Q14592 562 aa17.78■□□□□ 0.44
PRPF40B-216ENST00000552301 SLMAPQ14BN4 828 aa17.78■□□□□ 0.44
PRPF40B-216ENST00000552301 ZC3H12BQ5HYM0 836 aaKnown RBP17.78■□□□□ 0.44
PRPF40B-216ENST00000552301 ARHGAP40Q5TG30 622 aa17.78■□□□□ 0.44
PRPF40B-216ENST00000552301 KIAA1614Q5VZ46 1190 aa17.78■□□□□ 0.44
PRPF40B-216ENST00000552301 GPR155Q7Z3F1 870 aa17.78■□□□□ 0.44
PRPF40B-216ENST00000552301 RELL1Q8IUW5 271 aa17.78■□□□□ 0.44
PRPF40B-216ENST00000552301 PPFIBP2Q8ND30 876 aa17.78■□□□□ 0.44
PRPF40B-216ENST00000552301 CYTH2Q99418 400 aa17.78■□□□□ 0.44
PRPF40B-216ENST00000552301 GPR22Q99680 433 aa17.78■□□□□ 0.44
PRPF40B-216ENST00000552301 CDC42EP4Q9H3Q1 356 aaKnown RBP17.78■□□□□ 0.44
PRPF40B-216ENST00000552301 MRPS30Q9NP92 439 aaKnown RBP17.78■□□□□ 0.44
PRPF40B-216ENST00000552301 CCDC177Q9NQR7 707 aaPredicted RBP17.78■□□□□ 0.44
PRPF40B-216ENST00000552301 ARL15Q9NXU5 204 aa17.78■□□□□ 0.44
PRPF40B-216ENST00000552301 UTP6Q9NYH9 597 aaKnown RBP17.78■□□□□ 0.44
PRPF40B-216ENST00000552301 TAC3Q9UHF0 121 aa17.78■□□□□ 0.44
PRPF40B-216ENST00000552301 PDE10AQ9Y233 779 aa17.78■□□□□ 0.44
PRPF40B-216ENST00000552301 MTO1Q9Y2Z2 717 aaKnown RBP17.78■□□□□ 0.44
PRPF40B-216ENST00000552301 PCDHB3Q9Y5E6 796 aa17.78■□□□□ 0.44
PRPF40B-216ENST00000552301 SPTBP11277 2137 aa17.78■□□□□ 0.44
PRPF40B-216ENST00000552301 ANKRD12Q6UB98 2062 aa17.78■□□□□ 0.44
PRPF40B-216ENST00000552301 A0A1W2PPV9 198 aa17.77■□□□□ 0.44
PRPF40B-216ENST00000552301 E7ENX8 843 aa17.77■□□□□ 0.44
PRPF40B-216ENST00000552301 PRICKLE3O43900 615 aaPredicted RBP17.77■□□□□ 0.44
PRPF40B-216ENST00000552301 ACSL3O95573 720 aa17.77■□□□□ 0.44
PRPF40B-216ENST00000552301 ENO2P09104 434 aaPredicted RBP17.77■□□□□ 0.44
PRPF40B-216ENST00000552301 HBQ1P09105 142 aa17.77■□□□□ 0.44
PRPF40B-216ENST00000552301 STMN1P16949 149 aa17.77■□□□□ 0.44
PRPF40B-216ENST00000552301 IMPA1P29218 277 aa17.77■□□□□ 0.44
PRPF40B-216ENST00000552301 STAT5AP42229 794 aa17.77■□□□□ 0.44
PRPF40B-216ENST00000552301 AP1S2P56377 157 aa17.77■□□□□ 0.44
PRPF40B-216ENST00000552301 TAP2Q03519 686 aa17.77■□□□□ 0.44
PRPF40B-216ENST00000552301 SRSF6Q13247 344 aaKnown RBP17.77■□□□□ 0.44
PRPF40B-216ENST00000552301 EFTUD2Q15029 972 aaKnown RBP eCLIP17.77■□□□□ 0.44
PRPF40B-216ENST00000552301 OR2A1Q8NGT9 310 aa17.77■□□□□ 0.44
PRPF40B-216ENST00000552301 DLG3Q92796 817 aa17.77■□□□□ 0.44
PRPF40B-216ENST00000552301 ZUFSPQ96AP4 578 aa17.77■□□□□ 0.44
PRPF40B-216ENST00000552301 CLIP3Q96DZ5 547 aa17.77■□□□□ 0.44
PRPF40B-216ENST00000552301 MRRFQ96E11 262 aaKnown RBP17.77■□□□□ 0.44
PRPF40B-216ENST00000552301 PDLIM5Q96HC4 596 aaKnown RBP17.77■□□□□ 0.44
PRPF40B-216ENST00000552301 MCMBPQ9BTE3 642 aa17.77■□□□□ 0.44
PRPF40B-216ENST00000552301 PRORYQ9H606 182 aa17.77■□□□□ 0.44
PRPF40B-216ENST00000552301 ACTR5Q9H9F9 607 aaPredicted RBP17.77■□□□□ 0.44
PRPF40B-216ENST00000552301 L2HGDHQ9H9P8 463 aa17.77■□□□□ 0.44
PRPF40B-216ENST00000552301 CAB39LQ9H9S4 337 aa17.77■□□□□ 0.44
PRPF40B-216ENST00000552301 STOX2Q9P2F5 926 aaPredicted RBP17.77■□□□□ 0.44
PRPF40B-216ENST00000552301 PADI1Q9ULC6 663 aa17.77■□□□□ 0.44
PRPF40B-216ENST00000552301 NFU1Q9UMS0 254 aa17.77■□□□□ 0.44
PRPF40B-216ENST00000552301 SSUH2Q9Y2M2 353 aa17.77■□□□□ 0.44
PRPF40B-216ENST00000552301 AP1M2Q9Y6Q5 423 aa17.77■□□□□ 0.44
PRPF40B-216ENST00000552301 PCM1Q15154 2024 aa17.76■□□□□ 0.43
PRPF40B-216ENST00000552301 TARM1B6A8C7 271 aa17.76■□□□□ 0.43
PRPF40B-216ENST00000552301 K7ENP7 123 aa17.76■□□□□ 0.43
PRPF40B-216ENST00000552301 PHGDHO43175 533 aaKnown RBP17.76■□□□□ 0.43
PRPF40B-216ENST00000552301 EFSO43281 561 aa17.76■□□□□ 0.43
PRPF40B-216ENST00000552301 C1QAP02745 245 aa17.76■□□□□ 0.43
PRPF40B-216ENST00000552301 KLK3P07288 261 aaPredicted RBP17.76■□□□□ 0.43
PRPF40B-216ENST00000552301 LIFP15018 202 aa17.76■□□□□ 0.43
PRPF40B-216ENST00000552301 ECHS1P30084 290 aa17.76■□□□□ 0.43
PRPF40B-216ENST00000552301 GRIA3P42263 894 aa17.76■□□□□ 0.43
PRPF40B-216ENST00000552301 UAP1Q16222 522 aaPredicted RBP17.76■□□□□ 0.43
PRPF40B-216ENST00000552301 PHKG1Q16816 387 aa17.76■□□□□ 0.43
PRPF40B-216ENST00000552301 TEX35Q5T0J7 233 aa17.76■□□□□ 0.43
PRPF40B-216ENST00000552301 ICE2Q659A1 982 aa17.76■□□□□ 0.43
PRPF40B-216ENST00000552301 INO80CQ6PI98 192 aaPredicted RBP17.76■□□□□ 0.43
PRPF40B-216ENST00000552301 FRA10AC1Q70Z53 315 aa17.76■□□□□ 0.43
PRPF40B-216ENST00000552301 ADAMTSL2Q86TH1 951 aa17.76■□□□□ 0.43
PRPF40B-216ENST00000552301 CEP97Q8IW35 865 aa17.76■□□□□ 0.43
PRPF40B-216ENST00000552301 DNAJC22Q8N4W6 341 aa17.76■□□□□ 0.43
PRPF40B-216ENST00000552301 ATL1Q8WXF7 558 aa17.76■□□□□ 0.43
PRPF40B-216ENST00000552301 MR1Q95460 341 aa17.76■□□□□ 0.43
PRPF40B-216ENST00000552301 ALKBH8Q96BT7 664 aaKnown RBP17.76■□□□□ 0.43
PRPF40B-216ENST00000552301 MED8Q96G25 268 aa17.76■□□□□ 0.43
PRPF40B-216ENST00000552301 DPH7Q9BTV6 452 aa17.76■□□□□ 0.43
PRPF40B-216ENST00000552301 PCBD2Q9H0N5 130 aa17.76■□□□□ 0.43
PRPF40B-216ENST00000552301 LHX9Q9NQ69 397 aa17.76■□□□□ 0.43
PRPF40B-216ENST00000552301 EURLQ9NYK6 297 aa17.76■□□□□ 0.43
PRPF40B-216ENST00000552301 ANKMY1Q9P2S6 941 aa17.76■□□□□ 0.43
PRPF40B-216ENST00000552301 CTNNAL1Q9UBT7 734 aa17.76■□□□□ 0.43
PRPF40B-216ENST00000552301 LOC101059948A0A1B0GTJ6 334 aa17.75■□□□□ 0.43
PRPF40B-216ENST00000552301 NPEPPSL1A6NEC2 478 aa17.75■□□□□ 0.43
PRPF40B-216ENST00000552301 ZSCAN9O15535 394 aaPredicted RBP17.75■□□□□ 0.43
PRPF40B-216ENST00000552301 DLSTP36957 453 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms