RNA–Protein interactions for RNA: ENST00000550629.1

SCAF11-213, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-213ENST00000550629 GAPDHSO14556 408 aaPredicted RBP5.65□□□□□ -1.5
SCAF11-213ENST00000550629 VILLO15195 856 aa5.65□□□□□ -1.5
SCAF11-213ENST00000550629 SLC31A1O15431 190 aa5.65□□□□□ -1.5
SCAF11-213ENST00000550629 VEGFDO43915 354 aa5.65□□□□□ -1.5
SCAF11-213ENST00000550629 MAGEC1O60732 1142 aa5.65□□□□□ -1.5
SCAF11-213ENST00000550629 ERLIN1O75477 346 aa5.65□□□□□ -1.5
SCAF11-213ENST00000550629 VAPBO95292 243 aa5.65□□□□□ -1.5
SCAF11-213ENST00000550629 PAK4O96013 591 aaPredicted RBP5.65□□□□□ -1.5
SCAF11-213ENST00000550629 SLC4A1P02730 911 aa5.65□□□□□ -1.5
SCAF11-213ENST00000550629 ABHD2P08910 425 aa5.65□□□□□ -1.5
SCAF11-213ENST00000550629 GNSP15586 552 aa5.65□□□□□ -1.5
SCAF11-213ENST00000550629 ITGALP20701 1170 aa5.65□□□□□ -1.5
SCAF11-213ENST00000550629 BCKDHBP21953 392 aa5.65□□□□□ -1.5
SCAF11-213ENST00000550629 KELP23276 732 aa5.65□□□□□ -1.5
SCAF11-213ENST00000550629 NMBRP28336 390 aa5.65□□□□□ -1.5
SCAF11-213ENST00000550629 MAT2AP31153 395 aaKnown RBP5.65□□□□□ -1.5
SCAF11-213ENST00000550629 STX2P32856 288 aa5.65□□□□□ -1.5
SCAF11-213ENST00000550629 RABIFP47224 123 aa5.65□□□□□ -1.5
SCAF11-213ENST00000550629 PMS2P54278 862 aa5.65□□□□□ -1.5
SCAF11-213ENST00000550629 ADARP55265 1226 aaKnown RBP5.65□□□□□ -1.5
SCAF11-213ENST00000550629 KIAA1024LP59773 190 aa5.65□□□□□ -1.5
SCAF11-213ENST00000550629 PFN3P60673 137 aa5.65□□□□□ -1.5
SCAF11-213ENST00000550629 PRAMEP78395 509 aa5.65□□□□□ -1.5
SCAF11-213ENST00000550629 SEMG2Q02383 582 aa5.65□□□□□ -1.5
SCAF11-213ENST00000550629 NAB1Q13506 487 aa5.65□□□□□ -1.5
SCAF11-213ENST00000550629 PEX6Q13608 980 aa5.65□□□□□ -1.5
SCAF11-213ENST00000550629 SIM2Q14190 667 aaPredicted RBP5.65□□□□□ -1.5
SCAF11-213ENST00000550629 FGL2Q14314 439 aa5.65□□□□□ -1.5
SCAF11-213ENST00000550629 FASTKD3Q14CZ7 662 aaKnown RBP5.65□□□□□ -1.5
SCAF11-213ENST00000550629 BRD3Q15059 726 aa5.65□□□□□ -1.5
SCAF11-213ENST00000550629 IRF4Q15306 451 aa5.65□□□□□ -1.5
SCAF11-213ENST00000550629 CHRNA6Q15825 494 aa5.65□□□□□ -1.5
SCAF11-213ENST00000550629 LDLRAP1Q5SW96 308 aa5.65□□□□□ -1.5
SCAF11-213ENST00000550629 NEPROQ6NW34 567 aa5.65□□□□□ -1.5
SCAF11-213ENST00000550629 FAM151BQ6UXP7 276 aa5.65□□□□□ -1.5
SCAF11-213ENST00000550629 PACS1Q6VY07 963 aa5.65□□□□□ -1.5
SCAF11-213ENST00000550629 C3orf62Q6ZUJ4 267 aa5.65□□□□□ -1.5
SCAF11-213ENST00000550629 SNX20Q7Z614 316 aa5.65□□□□□ -1.5
SCAF11-213ENST00000550629 GALNT7Q86SF2 657 aa5.65□□□□□ -1.5
SCAF11-213ENST00000550629 SDCCAG8Q86SQ7 713 aaPredicted RBP5.65□□□□□ -1.5
SCAF11-213ENST00000550629 SLC26A11Q86WA9 606 aa5.65□□□□□ -1.5
SCAF11-213ENST00000550629 LRRC6Q86X45 466 aa5.65□□□□□ -1.5
SCAF11-213ENST00000550629 SYT12Q8IV01 421 aa5.65□□□□□ -1.5
SCAF11-213ENST00000550629 CNTN4Q8IWV2 1026 aa5.65□□□□□ -1.5
SCAF11-213ENST00000550629 MREGQ8N565 214 aa5.65□□□□□ -1.5
SCAF11-213ENST00000550629 FRMD1Q8N878 549 aa5.65□□□□□ -1.5
SCAF11-213ENST00000550629 GLB1L3Q8NCI6 653 aaPredicted RBP5.65□□□□□ -1.5
SCAF11-213ENST00000550629 DDHD1Q8NEL9 900 aa5.65□□□□□ -1.5
SCAF11-213ENST00000550629 OR52N2Q8NGI0 321 aa5.65□□□□□ -1.5
SCAF11-213ENST00000550629 OR13C4Q8NGS5 318 aa5.65□□□□□ -1.5
SCAF11-213ENST00000550629 OR4L1Q8NH43 312 aa5.65□□□□□ -1.5
SCAF11-213ENST00000550629 CEP76Q8TAP6 659 aa5.65□□□□□ -1.5
SCAF11-213ENST00000550629 ZNF398Q8TD17 642 aa5.65□□□□□ -1.5
SCAF11-213ENST00000550629 NEU4Q8WWR8 484 aaPredicted RBP5.65□□□□□ -1.5
SCAF11-213ENST00000550629 SCAMP4Q969E2 229 aa5.65□□□□□ -1.5
SCAF11-213ENST00000550629 GLYATL1Q969I3 302 aa5.65□□□□□ -1.5
SCAF11-213ENST00000550629 TBRG4Q969Z0 631 aaKnown RBP eCLIP5.65□□□□□ -1.5
SCAF11-213ENST00000550629 CLIP3Q96DZ5 547 aa5.65□□□□□ -1.5
SCAF11-213ENST00000550629 CERS2Q96G23 380 aa5.65□□□□□ -1.5
SCAF11-213ENST00000550629 COX14Q96I36 57 aa5.65□□□□□ -1.5
SCAF11-213ENST00000550629 RAX2Q96IS3 184 aa5.65□□□□□ -1.5
SCAF11-213ENST00000550629 HIC2Q96JB3 615 aa5.65□□□□□ -1.5
SCAF11-213ENST00000550629 ZNF514Q96K75 400 aaPredicted RBP5.65□□□□□ -1.5
SCAF11-213ENST00000550629 TBATAQ96M53 351 aa5.65□□□□□ -1.5
SCAF11-213ENST00000550629 ZNF778Q96MU6 729 aa5.65□□□□□ -1.5
SCAF11-213ENST00000550629 WDR83Q9BRX9 315 aaKnown RBP5.65□□□□□ -1.5
SCAF11-213ENST00000550629 SPATA16Q9BXB7 569 aa5.65□□□□□ -1.5
SCAF11-213ENST00000550629 RMI1Q9H9A7 625 aa5.65□□□□□ -1.5
SCAF11-213ENST00000550629 PPCSQ9HAB8 311 aa5.65□□□□□ -1.5
SCAF11-213ENST00000550629 PLAC1Q9HBJ0 212 aa5.65□□□□□ -1.5
SCAF11-213ENST00000550629 BPIFA1Q9NP55 256 aa5.65□□□□□ -1.5
SCAF11-213ENST00000550629 PHPT1Q9NRX4 125 aaPredicted RBP5.65□□□□□ -1.5
SCAF11-213ENST00000550629 C20orf96Q9NUD7 363 aaPredicted RBP5.65□□□□□ -1.5
SCAF11-213ENST00000550629 INTS10Q9NVR2 710 aaKnown RBP5.65□□□□□ -1.5
SCAF11-213ENST00000550629 NSMCE4AQ9NXX6 385 aa5.65□□□□□ -1.5
SCAF11-213ENST00000550629 GPRC5BQ9NZH0 403 aa5.65□□□□□ -1.5
SCAF11-213ENST00000550629 VPS18Q9P253 973 aa5.65□□□□□ -1.5
SCAF11-213ENST00000550629 FETUBQ9UGM5 382 aa5.65□□□□□ -1.5
SCAF11-213ENST00000550629 SLC2A6Q9UGQ3 507 aa5.65□□□□□ -1.5
SCAF11-213ENST00000550629 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.65□□□□□ -1.5
SCAF11-213ENST00000550629 RAB23Q9ULC3 237 aa5.65□□□□□ -1.5
SCAF11-213ENST00000550629 CHMP2BQ9UQN3 213 aa5.65□□□□□ -1.5
SCAF11-213ENST00000550629 PCDHGA5Q9Y5G8 931 aa5.65□□□□□ -1.5
SCAF11-213ENST00000550629 V9GYY5 206 aaPredicted RBP5.65□□□□□ -1.5
SCAF11-213ENST00000550629 MYO18AQ92614 2054 aaKnown RBP5.65□□□□□ -1.51
SCAF11-213ENST00000550629 ANKRD36A6QL64 1941 aa5.64□□□□□ -1.51
SCAF11-213ENST00000550629 A0A087WUV0 522 aaPredicted RBP5.64□□□□□ -1.51
SCAF11-213ENST00000550629 A0A0U1RQS6 177 aa5.64□□□□□ -1.51
SCAF11-213ENST00000550629 A0A1B0GTW7 788 aa5.64□□□□□ -1.51
SCAF11-213ENST00000550629 TCRBV9S1A1TA0A576 114 aa5.64□□□□□ -1.51
SCAF11-213ENST00000550629 FAM159BA6NKW6 160 aa5.64□□□□□ -1.51
SCAF11-213ENST00000550629 CACNB4O00305 520 aaPredicted RBP5.64□□□□□ -1.51
SCAF11-213ENST00000550629 QSOX1O00391 747 aa5.64□□□□□ -1.51
SCAF11-213ENST00000550629 RAD51BO15315 384 aa5.64□□□□□ -1.51
SCAF11-213ENST00000550629 BCAT2O15382 392 aaPredicted RBP5.64□□□□□ -1.51
SCAF11-213ENST00000550629 CD3EAPO15446 510 aaKnown RBP5.64□□□□□ -1.51
SCAF11-213ENST00000550629 BUD23O43709 281 aaKnown RBP5.64□□□□□ -1.51
SCAF11-213ENST00000550629 DFNA5O60443 496 aa5.64□□□□□ -1.51
SCAF11-213ENST00000550629 ITGA10O75578 1167 aa5.64□□□□□ -1.51
SCAF11-213ENST00000550629 AP2A2O94973 939 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms