RNA–Protein interactions for RNA: ENST00000548938.5

HDAC7-228, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 2,719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-228ENST00000548938 CINPQ9BW66 212 aaPredicted RBP13.38□□□□□ -0.27
HDAC7-228ENST00000548938 APOL5Q9BWW9 433 aa13.38□□□□□ -0.27
HDAC7-228ENST00000548938 NDEL1Q9GZM8 345 aa13.38□□□□□ -0.27
HDAC7-228ENST00000548938 TM9SF3Q9HD45 589 aa13.38□□□□□ -0.27
HDAC7-228ENST00000548938 SIRT5Q9NXA8 310 aa13.38□□□□□ -0.27
HDAC7-228ENST00000548938 MARCH2Q9P0N8 246 aa13.38□□□□□ -0.27
HDAC7-228ENST00000548938 RNF6Q9Y252 685 aa13.38□□□□□ -0.27
HDAC7-228ENST00000548938 AP3M1Q9Y2T2 418 aa13.38□□□□□ -0.27
HDAC7-228ENST00000548938 ANGPTL3Q9Y5C1 460 aa13.38□□□□□ -0.27
HDAC7-228ENST00000548938 A0A096LPI6 279 aa13.37□□□□□ -0.27
HDAC7-228ENST00000548938 ILVBLA1L0T0 632 aa13.37□□□□□ -0.27
HDAC7-228ENST00000548938 M0R082 166 aa13.37□□□□□ -0.27
HDAC7-228ENST00000548938 DSCR3O14972 297 aa13.37□□□□□ -0.27
HDAC7-228ENST00000548938 ULK1O75385 1050 aa13.37□□□□□ -0.27
HDAC7-228ENST00000548938 ERN1O75460 977 aaKnown RBP13.37□□□□□ -0.27
HDAC7-228ENST00000548938 ESR1P03372 595 aa13.37□□□□□ -0.27
HDAC7-228ENST00000548938 EFNA1P20827 205 aaPredicted RBP13.37□□□□□ -0.27
HDAC7-228ENST00000548938 PTPN6P29350 595 aa13.37□□□□□ -0.27
HDAC7-228ENST00000548938 C21orf33P30042 268 aaPredicted RBP13.37□□□□□ -0.27
HDAC7-228ENST00000548938 TRPC1P48995 793 aa13.37□□□□□ -0.27
HDAC7-228ENST00000548938 MAPKAPK2P49137 400 aa13.37□□□□□ -0.27
HDAC7-228ENST00000548938 CLCN4P51793 760 aa13.37□□□□□ -0.27
HDAC7-228ENST00000548938 COPZ1P61923 177 aa13.37□□□□□ -0.27
HDAC7-228ENST00000548938 USP39Q53GS9 565 aaKnown RBP13.37□□□□□ -0.27
HDAC7-228ENST00000548938 SOWAHCQ53LP3 525 aaPredicted RBP13.37□□□□□ -0.27
HDAC7-228ENST00000548938 C10orf120Q5SQS8 335 aa13.37□□□□□ -0.27
HDAC7-228ENST00000548938 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.37□□□□□ -0.27
HDAC7-228ENST00000548938 LRIF1Q5T3J3 769 aa13.37□□□□□ -0.27
HDAC7-228ENST00000548938 TSPYL5Q86VY4 417 aaPredicted RBP13.37□□□□□ -0.27
HDAC7-228ENST00000548938 HEATR4Q86WZ0 1026 aa13.37□□□□□ -0.27
HDAC7-228ENST00000548938 TTC9BQ8N6N2 239 aa13.37□□□□□ -0.27
HDAC7-228ENST00000548938 MTFMTQ96DP5 389 aaKnown RBP13.37□□□□□ -0.27
HDAC7-228ENST00000548938 SPON2Q9BUD6 331 aa13.37□□□□□ -0.27
HDAC7-228ENST00000548938 RNF167Q9H6Y7 350 aa13.37□□□□□ -0.27
HDAC7-228ENST00000548938 NEK6Q9HC98 313 aa13.37□□□□□ -0.27
HDAC7-228ENST00000548938 IL1RAPQ9NPH3 570 aa13.37□□□□□ -0.27
HDAC7-228ENST00000548938 SAMD4AQ9UPU9 718 aaKnown RBP13.37□□□□□ -0.27
HDAC7-228ENST00000548938 DLGAP4Q9Y2H0 992 aa13.37□□□□□ -0.27
HDAC7-228ENST00000548938 UGT2A1Q9Y4X1 527 aa13.37□□□□□ -0.27
HDAC7-228ENST00000548938 TRPV2Q9Y5S1 764 aa13.37□□□□□ -0.27
HDAC7-228ENST00000548938 SLC28A1O00337 649 aa13.37□□□□□ -0.27
HDAC7-228ENST00000548938 STX7O15400 261 aaKnown RBP13.37□□□□□ -0.27
HDAC7-228ENST00000548938 INSIG1O15503 277 aa13.37□□□□□ -0.27
HDAC7-228ENST00000548938 BMP1P13497 986 aa13.37□□□□□ -0.27
HDAC7-228ENST00000548938 ALOX12P18054 663 aa13.37□□□□□ -0.27
HDAC7-228ENST00000548938 FPR1P21462 350 aa13.37□□□□□ -0.27
HDAC7-228ENST00000548938 PAX3P23760 479 aa13.37□□□□□ -0.27
HDAC7-228ENST00000548938 DNAJA1P31689 397 aaKnown RBP13.37□□□□□ -0.27
HDAC7-228ENST00000548938 GRK5P34947 590 aa13.37□□□□□ -0.27
HDAC7-228ENST00000548938 TUBA1BP68363 451 aa13.37□□□□□ -0.27
HDAC7-228ENST00000548938 PROX2Q3B8N5 592 aa13.37□□□□□ -0.27
HDAC7-228ENST00000548938 TUBA3EQ6PEY2 450 aa13.37□□□□□ -0.27
HDAC7-228ENST00000548938 CCBE1Q6UXH8 406 aaPredicted RBP13.37□□□□□ -0.27
HDAC7-228ENST00000548938 RNF19BQ6ZMZ0 732 aa13.37□□□□□ -0.27
HDAC7-228ENST00000548938 TUBA1AQ71U36 451 aa13.37□□□□□ -0.27
HDAC7-228ENST00000548938 HORMAD1Q86X24 394 aa13.37□□□□□ -0.27
HDAC7-228ENST00000548938 CCDC103Q8IW40 242 aa13.37□□□□□ -0.27
HDAC7-228ENST00000548938 ENTHD1Q8IYW4 607 aa13.37□□□□□ -0.27
HDAC7-228ENST00000548938 METTL4Q8N3J2 472 aa13.37□□□□□ -0.27
HDAC7-228ENST00000548938 TMEM132CQ8N3T6 1108 aa13.37□□□□□ -0.27
HDAC7-228ENST00000548938 PARP16Q8N5Y8 322 aa13.37□□□□□ -0.27
HDAC7-228ENST00000548938 CELF2-AS1Q8N7Q2 184 aa13.37□□□□□ -0.27
HDAC7-228ENST00000548938 SUSD3Q96L08 255 aa13.37□□□□□ -0.27
HDAC7-228ENST00000548938 CAPNS2Q96L46 248 aa13.37□□□□□ -0.27
HDAC7-228ENST00000548938 PSKH2Q96QS6 385 aa13.37□□□□□ -0.27
HDAC7-228ENST00000548938 EGFL8Q99944 293 aa13.37□□□□□ -0.27
HDAC7-228ENST00000548938 KCNH6Q9H252 994 aa13.37□□□□□ -0.27
HDAC7-228ENST00000548938 QPCTLQ9NXS2 382 aa13.37□□□□□ -0.27
HDAC7-228ENST00000548938 DHRS7Q9Y394 339 aa13.37□□□□□ -0.27
HDAC7-228ENST00000548938 SAMHD1Q9Y3Z3 626 aaKnown RBP13.37□□□□□ -0.27
HDAC7-228ENST00000548938 ARIH1Q9Y4X5 557 aaPredicted RBP13.37□□□□□ -0.27
HDAC7-228ENST00000548938 WNT9AO14904 365 aa13.36□□□□□ -0.27
HDAC7-228ENST00000548938 SSX4O60224 188 aa13.36□□□□□ -0.27
HDAC7-228ENST00000548938 HOXB9P17482 250 aaPredicted RBP13.36□□□□□ -0.27
HDAC7-228ENST00000548938 PSMA3P25788 255 aa13.36□□□□□ -0.27
HDAC7-228ENST00000548938 PTGER3P43115 390 aa13.36□□□□□ -0.27
HDAC7-228ENST00000548938 CTSKP43235 329 aa13.36□□□□□ -0.27
HDAC7-228ENST00000548938 RPP38P78345 283 aaKnown RBP13.36□□□□□ -0.27
HDAC7-228ENST00000548938 ABHD18Q0P651 414 aa13.36□□□□□ -0.27
HDAC7-228ENST00000548938 CCSAPQ6IQ19 270 aaPredicted RBP13.36□□□□□ -0.27
HDAC7-228ENST00000548938 DOK6Q6PKX4 331 aa13.36□□□□□ -0.27
HDAC7-228ENST00000548938 Q6ZPB1 254 aaPredicted RBP13.36□□□□□ -0.27
HDAC7-228ENST00000548938 GALNT13Q8IUC8 556 aa13.36□□□□□ -0.27
HDAC7-228ENST00000548938 IPCEF1Q8WWN9 437 aaPredicted RBP13.36□□□□□ -0.27
HDAC7-228ENST00000548938 TBC1D20Q96BZ9 403 aa13.36□□□□□ -0.27
HDAC7-228ENST00000548938 COPS4Q9BT78 406 aa13.36□□□□□ -0.27
HDAC7-228ENST00000548938 CDADC1Q9BWV3 514 aa13.36□□□□□ -0.27
HDAC7-228ENST00000548938 NACA2Q9H009 215 aa13.36□□□□□ -0.27
HDAC7-228ENST00000548938 P2RY12Q9H244 342 aa13.36□□□□□ -0.27
HDAC7-228ENST00000548938 MOV10Q9HCE1 1003 aaKnown RBP13.36□□□□□ -0.27
HDAC7-228ENST00000548938 GPRC5BQ9NZH0 403 aa13.36□□□□□ -0.27
HDAC7-228ENST00000548938 MANBAO00462 879 aa13.36□□□□□ -0.27
HDAC7-228ENST00000548938 CCNDBP1O95273 360 aa13.36□□□□□ -0.27
HDAC7-228ENST00000548938 S100A3P33764 101 aa13.36□□□□□ -0.27
HDAC7-228ENST00000548938 UGT2B10P36537 528 aa13.36□□□□□ -0.27
HDAC7-228ENST00000548938 TUSC3Q13454 348 aa13.36□□□□□ -0.27
HDAC7-228ENST00000548938 MFSD4BQ5TF39 518 aa13.36□□□□□ -0.27
HDAC7-228ENST00000548938 RSBN1Q5VWQ0 802 aaPredicted RBP13.36□□□□□ -0.27
HDAC7-228ENST00000548938 PNCKQ6P2M8 343 aa13.36□□□□□ -0.27
HDAC7-228ENST00000548938 GDPD3Q7L5L3 318 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 150.4 ms