RNA–Protein interactions for RNA: ENST00000548522.5

SSH1-208, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 602 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-208ENST00000548522 SLC34A3Q8N130 599 aa15.75■□□□□ 0.11
SSH1-208ENST00000548522 ACRBPQ8NEB7 543 aa15.75■□□□□ 0.11
SSH1-208ENST00000548522 OR52K1Q8NGK4 314 aa15.75■□□□□ 0.11
SSH1-208ENST00000548522 NACC2Q96BF6 587 aa15.75■□□□□ 0.11
SSH1-208ENST00000548522 ZNF778Q96MU6 729 aa15.75■□□□□ 0.11
SSH1-208ENST00000548522 ZNF285Q96NJ3 590 aa15.75■□□□□ 0.11
SSH1-208ENST00000548522 EPS8L2Q9H6S3 715 aa15.75■□□□□ 0.11
SSH1-208ENST00000548522 MRM3Q9HC36 420 aaKnown RBP15.75■□□□□ 0.11
SSH1-208ENST00000548522 ZNF160Q9HCG1 818 aa15.75■□□□□ 0.11
SSH1-208ENST00000548522 CAMSAP3Q9P1Y5 1249 aaPredicted RBP15.75■□□□□ 0.11
SSH1-208ENST00000548522 RUVBL2Q9Y230 463 aaKnown RBP15.75■□□□□ 0.11
SSH1-208ENST00000548522 REXO2Q9Y3B8 237 aaKnown RBP15.75■□□□□ 0.11
SSH1-208ENST00000548522 MRFAP1Q9Y605 127 aa15.75■□□□□ 0.11
SSH1-208ENST00000548522 ANKRD12Q6UB98 2062 aa15.75■□□□□ 0.11
SSH1-208ENST00000548522 POLQO75417 2590 aa15.74■□□□□ 0.11
SSH1-208ENST00000548522 DCHS2Q6V1P9 2916 aa15.74■□□□□ 0.11
SSH1-208ENST00000548522 VSTM2BA6NLU5 285 aa15.74■□□□□ 0.11
SSH1-208ENST00000548522 GOT2P00505 430 aaKnown RBP15.74■□□□□ 0.11
SSH1-208ENST00000548522 STSP08842 583 aa15.74■□□□□ 0.11
SSH1-208ENST00000548522 ELAVL4P26378 380 aaKnown RBP15.74■□□□□ 0.11
SSH1-208ENST00000548522 RWDD2BP57060 319 aa15.74■□□□□ 0.11
SSH1-208ENST00000548522 MFAP5Q13361 173 aa15.74■□□□□ 0.11
SSH1-208ENST00000548522 GRM7Q14831 915 aa15.74■□□□□ 0.11
SSH1-208ENST00000548522 CCSMST1Q4G0I0 132 aa15.74■□□□□ 0.11
SSH1-208ENST00000548522 DNAJC21Q5F1R6 531 aaKnown RBP15.74■□□□□ 0.11
SSH1-208ENST00000548522 FRMPD2BQ6IN97 320 aa15.74■□□□□ 0.11
SSH1-208ENST00000548522 FIGLAQ6QHK4 219 aa15.74■□□□□ 0.11
SSH1-208ENST00000548522 FAM180AQ6UWF9 173 aa15.74■□□□□ 0.11
SSH1-208ENST00000548522 LDB1Q86U70 411 aaPredicted RBP15.74■□□□□ 0.11
SSH1-208ENST00000548522 DCUN1D3Q8IWE4 304 aa15.74■□□□□ 0.11
SSH1-208ENST00000548522 MCEMP1Q8IX19 187 aa15.74■□□□□ 0.11
SSH1-208ENST00000548522 KRT222Q8N1A0 295 aa15.74■□□□□ 0.11
SSH1-208ENST00000548522 HDAC10Q969S8 669 aa15.74■□□□□ 0.11
SSH1-208ENST00000548522 LRRC45Q96CN5 670 aa15.74■□□□□ 0.11
SSH1-208ENST00000548522 MAGEB10Q96LZ2 347 aaPredicted RBP15.74■□□□□ 0.11
SSH1-208ENST00000548522 ALS2CR12Q96Q35 445 aa15.74■□□□□ 0.11
SSH1-208ENST00000548522 TAAR6Q96RI8 345 aa15.74■□□□□ 0.11
SSH1-208ENST00000548522 SELENOSQ9BQE4 189 aa15.74■□□□□ 0.11
SSH1-208ENST00000548522 CRB3Q9BUF7 120 aa15.74■□□□□ 0.11
SSH1-208ENST00000548522 OLAHQ9NV23 265 aa15.74■□□□□ 0.11
SSH1-208ENST00000548522 TACC2O95359 2948 aa15.74■□□□□ 0.11
SSH1-208ENST00000548522 TCRBV7S2A1N4TA0A589 114 aa15.73■□□□□ 0.11
SSH1-208ENST00000548522 CTAGE9A4FU28 777 aa15.73■□□□□ 0.11
SSH1-208ENST00000548522 EFCAB8A8MWE9 144 aa15.73■□□□□ 0.11
SSH1-208ENST00000548522 FFAR3O14843 346 aa15.73■□□□□ 0.11
SSH1-208ENST00000548522 FANCGO15287 622 aa15.73■□□□□ 0.11
SSH1-208ENST00000548522 GPR42O15529 346 aa15.73■□□□□ 0.11
SSH1-208ENST00000548522 TJP3O95049 919 aa15.73■□□□□ 0.11
SSH1-208ENST00000548522 S1PR4O95977 384 aa15.73■□□□□ 0.11
SSH1-208ENST00000548522 F10P00742 488 aa15.73■□□□□ 0.11
SSH1-208ENST00000548522 GRIA1P42261 906 aa15.73■□□□□ 0.11
SSH1-208ENST00000548522 BDKRB1P46663 353 aa15.73■□□□□ 0.11
SSH1-208ENST00000548522 TDGF1P3P51864 188 aa15.73■□□□□ 0.11
SSH1-208ENST00000548522 VSX2P58304 361 aaPredicted RBP15.73■□□□□ 0.11
SSH1-208ENST00000548522 YBX1P67809 324 aaKnown RBP15.73■□□□□ 0.11
SSH1-208ENST00000548522 KLC1Q07866 573 aa15.73■□□□□ 0.11
SSH1-208ENST00000548522 SF1Q15637 639 aaKnown RBP15.73■□□□□ 0.11
SSH1-208ENST00000548522 SP5Q6BEB4 398 aaPredicted RBP15.73■□□□□ 0.11
SSH1-208ENST00000548522 ISLR2Q6UXK2 745 aa15.73■□□□□ 0.11
SSH1-208ENST00000548522 OR2L8Q8NGY9 312 aa15.73■□□□□ 0.11
SSH1-208ENST00000548522 NAPGQ99747 312 aaPredicted RBP15.73■□□□□ 0.11
SSH1-208ENST00000548522 TRIM56Q9BRZ2 755 aaKnown RBP15.73■□□□□ 0.11
SSH1-208ENST00000548522 TMEM121Q9BTD3 319 aa15.73■□□□□ 0.11
SSH1-208ENST00000548522 SEMA3GQ9NS98 782 aa15.73■□□□□ 0.11
SSH1-208ENST00000548522 PLA2G3Q9NZ20 509 aa15.73■□□□□ 0.11
SSH1-208ENST00000548522 NXT1Q9UKK6 140 aaKnown RBP15.73■□□□□ 0.11
SSH1-208ENST00000548522 LOC105369274A0A096LPK9 316 aa15.72■□□□□ 0.11
SSH1-208ENST00000548522 LOC102723532A0A0G2JNH3 316 aa15.72■□□□□ 0.11
SSH1-208ENST00000548522 GRID2IPA4D2P6 1211 aa15.72■□□□□ 0.11
SSH1-208ENST00000548522 FITM1A5D6W6 292 aa15.72■□□□□ 0.11
SSH1-208ENST00000548522 RASGRF2O14827 1237 aa15.72■□□□□ 0.11
SSH1-208ENST00000548522 PRICKLE3O43900 615 aaPredicted RBP15.72■□□□□ 0.11
SSH1-208ENST00000548522 KDM1AO60341 852 aa15.72■□□□□ 0.11
SSH1-208ENST00000548522 GPC4O75487 556 aa15.72■□□□□ 0.11
SSH1-208ENST00000548522 JRKO75564 520 aa15.72■□□□□ 0.11
SSH1-208ENST00000548522 CELA2AP08217 269 aa15.72■□□□□ 0.11
SSH1-208ENST00000548522 ACPPP15309 386 aa15.72■□□□□ 0.11
SSH1-208ENST00000548522 PLOD1Q02809 727 aaPredicted RBP15.72■□□□□ 0.11
SSH1-208ENST00000548522 WASHC2DQ5SRD0 308 aa15.72■□□□□ 0.11
SSH1-208ENST00000548522 ZNF324BQ6AW86 544 aaPredicted RBP15.72■□□□□ 0.11
SSH1-208ENST00000548522 AFTPHQ6ULP2 937 aa15.72■□□□□ 0.11
SSH1-208ENST00000548522 NLRP9Q7RTR0 991 aa15.72■□□□□ 0.11
SSH1-208ENST00000548522 OR4N4Q8N0Y3 316 aa15.72■□□□□ 0.11
SSH1-208ENST00000548522 BCORP1Q8N888 145 aa15.72■□□□□ 0.11
SSH1-208ENST00000548522 LRRC57Q8N9N7 239 aa15.72■□□□□ 0.11
SSH1-208ENST00000548522 TTC29Q8NA56 475 aaPredicted RBP15.72■□□□□ 0.11
SSH1-208ENST00000548522 OR1N1Q8NGS0 311 aa15.72■□□□□ 0.11
SSH1-208ENST00000548522 STT3BQ8TCJ2 826 aa15.72■□□□□ 0.11
SSH1-208ENST00000548522 COG1Q8WTW3 980 aa15.72■□□□□ 0.11
SSH1-208ENST00000548522 PSMF1Q92530 271 aa15.72■□□□□ 0.11
SSH1-208ENST00000548522 PHF12Q96QT6 1004 aa15.72■□□□□ 0.11
SSH1-208ENST00000548522 MIPEPQ99797 713 aa15.72■□□□□ 0.11
SSH1-208ENST00000548522 SYNPO2LQ9H987 977 aa15.72■□□□□ 0.11
SSH1-208ENST00000548522 LZTFL1Q9NQ48 299 aa15.72■□□□□ 0.11
SSH1-208ENST00000548522 MARCH4Q9P2E8 410 aaPredicted RBP15.72■□□□□ 0.11
SSH1-208ENST00000548522 PACSIN2Q9UNF0 486 aaPredicted RBP15.72■□□□□ 0.11
SSH1-208ENST00000548522 NFS1Q9Y697 457 aa15.72■□□□□ 0.11
SSH1-208ENST00000548522 F8P00451 2351 aa15.71■□□□□ 0.11
SSH1-208ENST00000548522 BTNL10A8MVZ5 291 aa15.71■□□□□ 0.11
SSH1-208ENST00000548522 URI1O94763 535 aaPredicted RBP15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms