RNA–Protein interactions for RNA: ENST00000548277.1

TRAFD1-205, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-205ENST00000548277 GAS2L3Q86XJ1 694 aa11.43□□□□□ -0.58
TRAFD1-205ENST00000548277 OR4N4Q8N0Y3 316 aa11.43□□□□□ -0.58
TRAFD1-205ENST00000548277 SIRT6Q8N6T7 355 aa11.43□□□□□ -0.58
TRAFD1-205ENST00000548277 BCORP1Q8N888 145 aa11.43□□□□□ -0.58
TRAFD1-205ENST00000548277 LRRC57Q8N9N7 239 aa11.43□□□□□ -0.58
TRAFD1-205ENST00000548277 STT3BQ8TCJ2 826 aa11.43□□□□□ -0.58
TRAFD1-205ENST00000548277 DENND1AQ8TEH3 1009 aa11.43□□□□□ -0.58
TRAFD1-205ENST00000548277 SKA2Q8WVK7 121 aaPredicted RBP11.43□□□□□ -0.58
TRAFD1-205ENST00000548277 ALG3Q92685 438 aa11.43□□□□□ -0.58
TRAFD1-205ENST00000548277 MIEF2Q96C03 454 aa11.43□□□□□ -0.58
TRAFD1-205ENST00000548277 C19orf43Q9BQ61 176 aa11.43□□□□□ -0.58
TRAFD1-205ENST00000548277 WDR54Q9H977 334 aa11.43□□□□□ -0.58
TRAFD1-205ENST00000548277 SEMA3GQ9NS98 782 aa11.43□□□□□ -0.58
TRAFD1-205ENST00000548277 INTS7Q9NVH2 962 aaKnown RBP11.43□□□□□ -0.58
TRAFD1-205ENST00000548277 ITGB1BP2Q9UKP3 347 aa11.43□□□□□ -0.58
TRAFD1-205ENST00000548277 AMFRQ9UKV5 643 aa11.43□□□□□ -0.58
TRAFD1-205ENST00000548277 PACSIN2Q9UNF0 486 aaPredicted RBP11.43□□□□□ -0.58
TRAFD1-205ENST00000548277 CENPEQ02224 2701 aa11.43□□□□□ -0.58
TRAFD1-205ENST00000548277 TRGV8A0A0C4DH27 118 aa11.42□□□□□ -0.58
TRAFD1-205ENST00000548277 A0A1B0GUH1 482 aa11.42□□□□□ -0.58
TRAFD1-205ENST00000548277 HYKKA2RU49 373 aa11.42□□□□□ -0.58
TRAFD1-205ENST00000548277 GRID2IPA4D2P6 1211 aa11.42□□□□□ -0.58
TRAFD1-205ENST00000548277 MROH6A6NGR9 719 aa11.42□□□□□ -0.58
TRAFD1-205ENST00000548277 MAP2K7O14733 419 aa11.42□□□□□ -0.58
TRAFD1-205ENST00000548277 PSMD3O43242 534 aa11.42□□□□□ -0.58
TRAFD1-205ENST00000548277 S1PR4O95977 384 aa11.42□□□□□ -0.58
TRAFD1-205ENST00000548277 CELA2AP08217 269 aa11.42□□□□□ -0.58
TRAFD1-205ENST00000548277 GRIA1P42261 906 aa11.42□□□□□ -0.58
TRAFD1-205ENST00000548277 YBX1P67809 324 aaKnown RBP11.42□□□□□ -0.58
TRAFD1-205ENST00000548277 PLOD1Q02809 727 aaPredicted RBP11.42□□□□□ -0.58
TRAFD1-205ENST00000548277 EEF1A2Q05639 463 aaKnown RBP11.42□□□□□ -0.58
TRAFD1-205ENST00000548277 MFAP5Q13361 173 aa11.42□□□□□ -0.58
TRAFD1-205ENST00000548277 FAM214AQ32MH5 1076 aa11.42□□□□□ -0.58
TRAFD1-205ENST00000548277 CCSMST1Q4G0I0 132 aa11.42□□□□□ -0.58
TRAFD1-205ENST00000548277 FASTKD1Q53R41 847 aaKnown RBP11.42□□□□□ -0.58
TRAFD1-205ENST00000548277 DNAJC21Q5F1R6 531 aaKnown RBP11.42□□□□□ -0.58
TRAFD1-205ENST00000548277 TCTE1Q5JU00 501 aa11.42□□□□□ -0.58
TRAFD1-205ENST00000548277 GFRALQ6UXV0 394 aa11.42□□□□□ -0.58
TRAFD1-205ENST00000548277 PACS1Q6VY07 963 aa11.42□□□□□ -0.58
TRAFD1-205ENST00000548277 PPP1R21Q6ZMI0 780 aa11.42□□□□□ -0.58
TRAFD1-205ENST00000548277 PRUNE1Q86TP1 453 aa11.42□□□□□ -0.58
TRAFD1-205ENST00000548277 SLC22A15Q8IZD6 547 aa11.42□□□□□ -0.58
TRAFD1-205ENST00000548277 OR13J1Q8NGT2 312 aa11.42□□□□□ -0.58
TRAFD1-205ENST00000548277 OR2L8Q8NGY9 312 aa11.42□□□□□ -0.58
TRAFD1-205ENST00000548277 BRIX1Q8TDN6 353 aaKnown RBP11.42□□□□□ -0.58
TRAFD1-205ENST00000548277 NACC2Q96BF6 587 aa11.42□□□□□ -0.58
TRAFD1-205ENST00000548277 SLC22A18Q96BI1 424 aa11.42□□□□□ -0.58
TRAFD1-205ENST00000548277 ZNF778Q96MU6 729 aa11.42□□□□□ -0.58
TRAFD1-205ENST00000548277 TAAR6Q96RI8 345 aa11.42□□□□□ -0.58
TRAFD1-205ENST00000548277 LMF1Q96S06 567 aa11.42□□□□□ -0.58
TRAFD1-205ENST00000548277 TTC1Q99614 292 aa11.42□□□□□ -0.58
TRAFD1-205ENST00000548277 BAG1Q99933 345 aaPredicted RBP11.42□□□□□ -0.58
TRAFD1-205ENST00000548277 MENTQ9BUN1 341 aa11.42□□□□□ -0.58
TRAFD1-205ENST00000548277 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.42□□□□□ -0.58
TRAFD1-205ENST00000548277 MRM3Q9HC36 420 aaKnown RBP11.42□□□□□ -0.58
TRAFD1-205ENST00000548277 C3orf18Q9UK00 162 aa11.42□□□□□ -0.58
TRAFD1-205ENST00000548277 RUVBL2Q9Y230 463 aaKnown RBP11.42□□□□□ -0.58
TRAFD1-205ENST00000548277 R3HDM2Q9Y2K5 976 aaKnown RBP11.42□□□□□ -0.58
TRAFD1-205ENST00000548277 NFS1Q9Y697 457 aa11.42□□□□□ -0.58
TRAFD1-205ENST00000548277 TEP1Q99973 2627 aaKnown RBP11.41□□□□□ -0.58
TRAFD1-205ENST00000548277 NSG1A0A0A6YYJ2 146 aa11.41□□□□□ -0.58
TRAFD1-205ENST00000548277 TCRBV7S2A1N4TA0A589 114 aa11.41□□□□□ -0.58
TRAFD1-205ENST00000548277 DYTNA2CJ06 578 aa11.41□□□□□ -0.58
TRAFD1-205ENST00000548277 RASGRF2O14827 1237 aa11.41□□□□□ -0.58
TRAFD1-205ENST00000548277 HPP00738 406 aa11.41□□□□□ -0.58
TRAFD1-205ENST00000548277 APOA4P06727 396 aa11.41□□□□□ -0.58
TRAFD1-205ENST00000548277 STSP08842 583 aa11.41□□□□□ -0.58
TRAFD1-205ENST00000548277 ZGLP1P0C6A0 271 aa11.41□□□□□ -0.58
TRAFD1-205ENST00000548277 ACPPP15309 386 aa11.41□□□□□ -0.58
TRAFD1-205ENST00000548277 TSTA3Q13630 321 aaPredicted RBP11.41□□□□□ -0.58
TRAFD1-205ENST00000548277 TSTD2Q5T7W7 516 aa11.41□□□□□ -0.58
TRAFD1-205ENST00000548277 B3GNTL1Q67FW5 361 aaPredicted RBP11.41□□□□□ -0.58
TRAFD1-205ENST00000548277 TTC23LQ6PF05 361 aa11.41□□□□□ -0.58
TRAFD1-205ENST00000548277 PEX26Q7Z412 305 aa11.41□□□□□ -0.58
TRAFD1-205ENST00000548277 DCUN1D3Q8IWE4 304 aa11.41□□□□□ -0.58
TRAFD1-205ENST00000548277 KLHDC8BQ8IXV7 354 aa11.41□□□□□ -0.58
TRAFD1-205ENST00000548277 KBTBD2Q8IY47 623 aa11.41□□□□□ -0.58
TRAFD1-205ENST00000548277 OR4L1Q8NH43 312 aa11.41□□□□□ -0.58
TRAFD1-205ENST00000548277 ASZ1Q8WWH4 475 aa11.41□□□□□ -0.58
TRAFD1-205ENST00000548277 VPS50Q96JG6 964 aa11.41□□□□□ -0.58
TRAFD1-205ENST00000548277 SLX1AQ9BQ83 275 aa11.41□□□□□ -0.58
TRAFD1-205ENST00000548277 ACAT2Q9BWD1 397 aa11.41□□□□□ -0.58
TRAFD1-205ENST00000548277 SLC26A1Q9H2B4 701 aa11.41□□□□□ -0.58
TRAFD1-205ENST00000548277 ZNF282Q9UDV7 671 aaPredicted RBP11.41□□□□□ -0.58
TRAFD1-205ENST00000548277 ANAPC5Q9UJX4 755 aa11.41□□□□□ -0.58
TRAFD1-205ENST00000548277 NXT1Q9UKK6 140 aaKnown RBP11.41□□□□□ -0.58
TRAFD1-205ENST00000548277 TTC7AQ9ULT0 858 aaPredicted RBP11.41□□□□□ -0.58
TRAFD1-205ENST00000548277 A0A0U1RQJ8 604 aa11.4□□□□□ -0.58
TRAFD1-205ENST00000548277 HEATR9A2RTY3 570 aa11.4□□□□□ -0.58
TRAFD1-205ENST00000548277 GOLGA6L9A6NEM1 432 aa11.4□□□□□ -0.58
TRAFD1-205ENST00000548277 VSTM2BA6NLU5 285 aa11.4□□□□□ -0.58
TRAFD1-205ENST00000548277 F8W8V4 182 aa11.4□□□□□ -0.58
TRAFD1-205ENST00000548277 CCL21O00585 134 aa11.4□□□□□ -0.58
TRAFD1-205ENST00000548277 PRICKLE3O43900 615 aaPredicted RBP11.4□□□□□ -0.58
TRAFD1-205ENST00000548277 GPC4O75487 556 aa11.4□□□□□ -0.58
TRAFD1-205ENST00000548277 WFS1O76024 890 aa11.4□□□□□ -0.58
TRAFD1-205ENST00000548277 UNC5CO95185 931 aa11.4□□□□□ -0.58
TRAFD1-205ENST00000548277 ONECUT2O95948 504 aa11.4□□□□□ -0.58
TRAFD1-205ENST00000548277 GAS8O95995 478 aa11.4□□□□□ -0.58
TRAFD1-205ENST00000548277 RPN2P04844 631 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms