RNA–Protein interactions for RNA: ENST00000547764.1

PRPF40B-206, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-206ENST00000547764 SLC16A5O15375 505 aa18.01■□□□□ 0.47
PRPF40B-206ENST00000547764 CYP2A7P20853 494 aa18.01■□□□□ 0.47
PRPF40B-206ENST00000547764 GRIA3P42263 894 aa18.01■□□□□ 0.47
PRPF40B-206ENST00000547764 YBX1P67809 324 aaKnown RBP18.01■□□□□ 0.47
PRPF40B-206ENST00000547764 TAP2Q03519 686 aa18.01■□□□□ 0.47
PRPF40B-206ENST00000547764 SP140Q13342 867 aa18.01■□□□□ 0.47
PRPF40B-206ENST00000547764 TSTA3Q13630 321 aaPredicted RBP18.01■□□□□ 0.47
PRPF40B-206ENST00000547764 KBTBD12Q3ZCT8 623 aa18.01■□□□□ 0.47
PRPF40B-206ENST00000547764 CTAGE3PQ8IX95 158 aa18.01■□□□□ 0.47
PRPF40B-206ENST00000547764 SYTL1Q8IYJ3 562 aa18.01■□□□□ 0.47
PRPF40B-206ENST00000547764 FBF1Q8TES7 1133 aa18.01■□□□□ 0.47
PRPF40B-206ENST00000547764 IFT81Q8WYA0 676 aa18.01■□□□□ 0.47
PRPF40B-206ENST00000547764 ZUFSPQ96AP4 578 aa18.01■□□□□ 0.47
PRPF40B-206ENST00000547764 CPNE1Q99829 537 aa18.01■□□□□ 0.47
PRPF40B-206ENST00000547764 ACAT2Q9BWD1 397 aa18.01■□□□□ 0.47
PRPF40B-206ENST00000547764 FAM129AQ9BZQ8 928 aa18.01■□□□□ 0.47
PRPF40B-206ENST00000547764 SPRTNQ9H040 489 aaPredicted RBP18.01■□□□□ 0.47
PRPF40B-206ENST00000547764 AKIRIN1Q9H9L7 192 aaPredicted RBP18.01■□□□□ 0.47
PRPF40B-206ENST00000547764 PARVBQ9HBI1 364 aa18.01■□□□□ 0.47
PRPF40B-206ENST00000547764 LHX9Q9NQ69 397 aa18.01■□□□□ 0.47
PRPF40B-206ENST00000547764 TXNDC16Q9P2K2 825 aa18.01■□□□□ 0.47
PRPF40B-206ENST00000547764 MTRF1LQ9UGC7 380 aaKnown RBP18.01■□□□□ 0.47
PRPF40B-206ENST00000547764 IL17BQ9UHF5 180 aa18.01■□□□□ 0.47
PRPF40B-206ENST00000547764 CROTQ9UKG9 612 aa18.01■□□□□ 0.47
PRPF40B-206ENST00000547764 PLCL2Q9UPR0 1127 aa18.01■□□□□ 0.47
PRPF40B-206ENST00000547764 MTO1Q9Y2Z2 717 aaKnown RBP18.01■□□□□ 0.47
PRPF40B-206ENST00000547764 TARM1B6A8C7 271 aa18■□□□□ 0.47
PRPF40B-206ENST00000547764 H3BMH7 237 aa18■□□□□ 0.47
PRPF40B-206ENST00000547764 OR2B3O76000 313 aa18■□□□□ 0.47
PRPF40B-206ENST00000547764 CTSBP07858 339 aa18■□□□□ 0.47
PRPF40B-206ENST00000547764 ZNF37AP17032 561 aaPredicted RBP18■□□□□ 0.47
PRPF40B-206ENST00000547764 IMPA1P29218 277 aa18■□□□□ 0.47
PRPF40B-206ENST00000547764 STX2P32856 288 aa18■□□□□ 0.47
PRPF40B-206ENST00000547764 RPA3P35244 121 aaPredicted RBP18■□□□□ 0.47
PRPF40B-206ENST00000547764 GP5P40197 560 aa18■□□□□ 0.47
PRPF40B-206ENST00000547764 ILF2Q12905 390 aaKnown RBP18■□□□□ 0.47
PRPF40B-206ENST00000547764 GPS2Q13227 327 aa18■□□□□ 0.47
PRPF40B-206ENST00000547764 ZNF460Q14592 562 aa18■□□□□ 0.47
PRPF40B-206ENST00000547764 PHKG1Q16816 387 aa18■□□□□ 0.47
PRPF40B-206ENST00000547764 CEP97Q8IW35 865 aa18■□□□□ 0.47
PRPF40B-206ENST00000547764 LRRC56Q8IYG6 542 aaPredicted RBP18■□□□□ 0.47
PRPF40B-206ENST00000547764 GPR135Q8IZ08 494 aa18■□□□□ 0.47
PRPF40B-206ENST00000547764 PPM1NQ8N819 430 aa18■□□□□ 0.47
PRPF40B-206ENST00000547764 ZSCAN1Q8NBB4 408 aa18■□□□□ 0.47
PRPF40B-206ENST00000547764 PDLIM5Q96HC4 596 aaKnown RBP18■□□□□ 0.47
PRPF40B-206ENST00000547764 CCDC138Q96M89 665 aa18■□□□□ 0.47
PRPF40B-206ENST00000547764 RBBP8Q99708 897 aa18■□□□□ 0.47
PRPF40B-206ENST00000547764 EFHD1Q9BUP0 239 aa18■□□□□ 0.47
PRPF40B-206ENST00000547764 ACTR5Q9H9F9 607 aaPredicted RBP18■□□□□ 0.47
PRPF40B-206ENST00000547764 EURLQ9NYK6 297 aa18■□□□□ 0.47
PRPF40B-206ENST00000547764 KLK4Q9Y5K2 254 aa18■□□□□ 0.47
PRPF40B-206ENST00000547764 PCM1Q15154 2024 aa17.99■□□□□ 0.47
PRPF40B-206ENST00000547764 TERTO14746 1132 aaKnown RBP17.99■□□□□ 0.47
PRPF40B-206ENST00000547764 ZNF749O43361 778 aa17.99■□□□□ 0.47
PRPF40B-206ENST00000547764 F8A1P23610 371 aa17.99■□□□□ 0.47
PRPF40B-206ENST00000547764 ECHS1P30084 290 aa17.99■□□□□ 0.47
PRPF40B-206ENST00000547764 CMPK1P30085 196 aa17.99■□□□□ 0.47
PRPF40B-206ENST00000547764 DLSTP36957 453 aa17.99■□□□□ 0.47
PRPF40B-206ENST00000547764 POU4F1Q01851 419 aa17.99■□□□□ 0.47
PRPF40B-206ENST00000547764 FAM199XQ6PEV8 388 aaPredicted RBP17.99■□□□□ 0.47
PRPF40B-206ENST00000547764 MBOAT1Q6ZNC8 495 aa17.99■□□□□ 0.47
PRPF40B-206ENST00000547764 MCATQ8IVS2 390 aaKnown RBP17.99■□□□□ 0.47
PRPF40B-206ENST00000547764 CLIP3Q96DZ5 547 aa17.99■□□□□ 0.47
PRPF40B-206ENST00000547764 SLC45A3Q96JT2 553 aa17.99■□□□□ 0.47
PRPF40B-206ENST00000547764 LRFN5Q96NI6 719 aa17.99■□□□□ 0.47
PRPF40B-206ENST00000547764 ABCF3Q9NUQ8 709 aa17.99■□□□□ 0.47
PRPF40B-206ENST00000547764 STOX2Q9P2F5 926 aaPredicted RBP17.99■□□□□ 0.47
PRPF40B-206ENST00000547764 TAC3Q9UHF0 121 aa17.99■□□□□ 0.47
PRPF40B-206ENST00000547764 IKZF3Q9UKT9 509 aa17.99■□□□□ 0.47
PRPF40B-206ENST00000547764 MEN1O00255 615 aa17.98■□□□□ 0.47
PRPF40B-206ENST00000547764 NRP2O60462 931 aa17.98■□□□□ 0.47
PRPF40B-206ENST00000547764 CTSVO60911 334 aa17.98■□□□□ 0.47
PRPF40B-206ENST00000547764 HIST1H2AGP0C0S8 130 aaPredicted RBP17.98■□□□□ 0.47
PRPF40B-206ENST00000547764 TCN2P20062 427 aa17.98■□□□□ 0.47
PRPF40B-206ENST00000547764 HIST1H2ADP20671 130 aa17.98■□□□□ 0.47
PRPF40B-206ENST00000547764 RORAP35398 523 aa17.98■□□□□ 0.47
PRPF40B-206ENST00000547764 SLC12A2P55011 1212 aa17.98■□□□□ 0.47
PRPF40B-206ENST00000547764 CYP4F2P78329 520 aa17.98■□□□□ 0.47
PRPF40B-206ENST00000547764 PRDX1Q06830 199 aaKnown RBP17.98■□□□□ 0.47
PRPF40B-206ENST00000547764 ZC3H12BQ5HYM0 836 aaKnown RBP17.98■□□□□ 0.47
PRPF40B-206ENST00000547764 ICE2Q659A1 982 aa17.98■□□□□ 0.47
PRPF40B-206ENST00000547764 ZNF517Q6ZMY9 492 aaPredicted RBP17.98■□□□□ 0.47
PRPF40B-206ENST00000547764 CEP128Q6ZU80 1094 aa17.98■□□□□ 0.47
PRPF40B-206ENST00000547764 RELL1Q8IUW5 271 aa17.98■□□□□ 0.47
PRPF40B-206ENST00000547764 NKAPQ8N5F7 415 aaKnown RBP17.98■□□□□ 0.47
PRPF40B-206ENST00000547764 CT55Q8WUE5 264 aa17.98■□□□□ 0.47
PRPF40B-206ENST00000547764 ANKRD49Q8WVL7 239 aa17.98■□□□□ 0.47
PRPF40B-206ENST00000547764 MR1Q95460 341 aa17.98■□□□□ 0.47
PRPF40B-206ENST00000547764 HIST1H2AHQ96KK5 128 aa17.98■□□□□ 0.47
PRPF40B-206ENST00000547764 FMO2Q99518 471 aa17.98■□□□□ 0.47
PRPF40B-206ENST00000547764 GPR22Q99680 433 aa17.98■□□□□ 0.47
PRPF40B-206ENST00000547764 HIST1H2AJQ99878 128 aa17.98■□□□□ 0.47
PRPF40B-206ENST00000547764 H2AFJQ9BTM1 129 aa17.98■□□□□ 0.47
PRPF40B-206ENST00000547764 DPH7Q9BTV6 452 aa17.98■□□□□ 0.47
PRPF40B-206ENST00000547764 SLC7A5P2Q9GIP4 190 aa17.98■□□□□ 0.47
PRPF40B-206ENST00000547764 CAB39LQ9H9S4 337 aa17.98■□□□□ 0.47
PRPF40B-206ENST00000547764 POPDC3Q9HBV1 291 aa17.98■□□□□ 0.47
PRPF40B-206ENST00000547764 GPAMQ9HCL2 828 aa17.98■□□□□ 0.47
PRPF40B-206ENST00000547764 SLC6A20Q9NP91 592 aa17.98■□□□□ 0.47
PRPF40B-206ENST00000547764 MRPS30Q9NP92 439 aaKnown RBP17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms