RNA–Protein interactions for RNA: ENST00000547672.5

PTCH1-215, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-215ENST00000547672 FFAR3O14843 346 aa13.03□□□□□ -0.32
PTCH1-215ENST00000547672 GPR42O15529 346 aa13.03□□□□□ -0.32
PTCH1-215ENST00000547672 LATO43561 262 aa13.03□□□□□ -0.32
PTCH1-215ENST00000547672 PRMT3O60678 531 aa13.03□□□□□ -0.32
PTCH1-215ENST00000547672 PDYNP01213 254 aa13.03□□□□□ -0.32
PTCH1-215ENST00000547672 CHRNB1P11230 501 aa13.03□□□□□ -0.32
PTCH1-215ENST00000547672 EPORP19235 508 aa13.03□□□□□ -0.32
PTCH1-215ENST00000547672 JAK1P23458 1154 aa13.03□□□□□ -0.32
PTCH1-215ENST00000547672 MAT2AP31153 395 aaKnown RBP13.03□□□□□ -0.32
PTCH1-215ENST00000547672 IGFALSP35858 605 aa13.03□□□□□ -0.32
PTCH1-215ENST00000547672 BDKRB1P46663 353 aa13.03□□□□□ -0.32
PTCH1-215ENST00000547672 RABIFP47224 123 aa13.03□□□□□ -0.32
PTCH1-215ENST00000547672 ACTR3P61158 418 aa13.03□□□□□ -0.32
PTCH1-215ENST00000547672 PSME3P61289 254 aa13.03□□□□□ -0.32
PTCH1-215ENST00000547672 AP2B1P63010 937 aa13.03□□□□□ -0.32
PTCH1-215ENST00000547672 DOC2AQ14183 400 aa13.03□□□□□ -0.32
PTCH1-215ENST00000547672 SGO1Q5FBB7 561 aa13.03□□□□□ -0.32
PTCH1-215ENST00000547672 REP15Q6BDI9 236 aa13.03□□□□□ -0.32
PTCH1-215ENST00000547672 PAOXQ6QHF9 649 aa13.03□□□□□ -0.32
PTCH1-215ENST00000547672 CYP20A1Q6UW02 462 aa13.03□□□□□ -0.32
PTCH1-215ENST00000547672 SCIMPQ6UWF3 145 aa13.03□□□□□ -0.32
PTCH1-215ENST00000547672 GK5Q6ZS86 529 aa13.03□□□□□ -0.32
PTCH1-215ENST00000547672 MINDY1Q8N5J2 469 aa13.03□□□□□ -0.32
PTCH1-215ENST00000547672 TBC1D19Q8N5T2 526 aa13.03□□□□□ -0.32
PTCH1-215ENST00000547672 LILRA3Q8N6C8 439 aaPredicted RBP13.03□□□□□ -0.32
PTCH1-215ENST00000547672 HMGB4Q8WW32 186 aa13.03□□□□□ -0.32
PTCH1-215ENST00000547672 ZFPM2Q8WW38 1151 aa13.03□□□□□ -0.32
PTCH1-215ENST00000547672 SH3KBP1Q96B97 665 aa13.03□□□□□ -0.32
PTCH1-215ENST00000547672 OR2M4Q96R27 311 aa13.03□□□□□ -0.32
PTCH1-215ENST00000547672 FERD3LQ96RJ6 166 aa13.03□□□□□ -0.32
PTCH1-215ENST00000547672 CDRT15Q96T59 188 aa13.03□□□□□ -0.32
PTCH1-215ENST00000547672 DPY30Q9C005 99 aa13.03□□□□□ -0.32
PTCH1-215ENST00000547672 RNPEPL1Q9HAU8 725 aa13.03□□□□□ -0.32
PTCH1-215ENST00000547672 PRM3Q9NNZ6 103 aa13.03□□□□□ -0.32
PTCH1-215ENST00000547672 SPAG4Q9NPE6 437 aa13.03□□□□□ -0.32
PTCH1-215ENST00000547672 VPS29Q9UBQ0 182 aa13.03□□□□□ -0.32
PTCH1-215ENST00000547672 MOSPD1Q9UJG1 213 aa13.03□□□□□ -0.32
PTCH1-215ENST00000547672 FBXL21Q9UKT6 434 aa13.03□□□□□ -0.32
PTCH1-215ENST00000547672 RUVBL1Q9Y265 456 aaKnown RBP13.03□□□□□ -0.32
PTCH1-215ENST00000547672 CCL27Q9Y4X3 112 aa13.03□□□□□ -0.32
PTCH1-215ENST00000547672 PRSS38A1L453 326 aa13.02□□□□□ -0.33
PTCH1-215ENST00000547672 E7ENX8 843 aa13.02□□□□□ -0.33
PTCH1-215ENST00000547672 TRIM38O00635 465 aa13.02□□□□□ -0.33
PTCH1-215ENST00000547672 NARSO43776 548 aaKnown RBP13.02□□□□□ -0.33
PTCH1-215ENST00000547672 DNAJA2O60884 412 aa13.02□□□□□ -0.33
PTCH1-215ENST00000547672 ACP5P13686 325 aa13.02□□□□□ -0.33
PTCH1-215ENST00000547672 NPPBP16860 134 aa13.02□□□□□ -0.33
PTCH1-215ENST00000547672 DDX5P17844 614 aaKnown RBP13.02□□□□□ -0.33
PTCH1-215ENST00000547672 HRH2P25021 359 aa13.02□□□□□ -0.33
PTCH1-215ENST00000547672 PIK3CBP42338 1070 aa13.02□□□□□ -0.33
PTCH1-215ENST00000547672 DIO3P55073 304 aa13.02□□□□□ -0.33
PTCH1-215ENST00000547672 STARD6P59095 220 aa13.02□□□□□ -0.33
PTCH1-215ENST00000547672 TAP2Q03519 686 aa13.02□□□□□ -0.33
PTCH1-215ENST00000547672 TRAP1Q12931 704 aaKnown RBP13.02□□□□□ -0.33
PTCH1-215ENST00000547672 RCAN2Q14206 197 aa13.02□□□□□ -0.33
PTCH1-215ENST00000547672 MAP7Q14244 749 aa13.02□□□□□ -0.33
PTCH1-215ENST00000547672 DPY19L1Q2PZI1 675 aa13.02□□□□□ -0.33
PTCH1-215ENST00000547672 UAP1L1Q3KQV9 507 aa13.02□□□□□ -0.33
PTCH1-215ENST00000547672 PLA2G4EQ3MJ16 856 aa13.02□□□□□ -0.33
PTCH1-215ENST00000547672 KIAA0895LQ68EN5 471 aa13.02□□□□□ -0.33
PTCH1-215ENST00000547672 NXPE4Q6UWF7 544 aa13.02□□□□□ -0.33
PTCH1-215ENST00000547672 SLCO4C1Q6ZQN7 724 aa13.02□□□□□ -0.33
PTCH1-215ENST00000547672 FAM83HQ6ZRV2 1179 aaPredicted RBP13.02□□□□□ -0.33
PTCH1-215ENST00000547672 C17orf64Q86WR6 236 aa13.02□□□□□ -0.33
PTCH1-215ENST00000547672 FUNDC1Q8IVP5 155 aa13.02□□□□□ -0.33
PTCH1-215ENST00000547672 ENDOVQ8N8Q3 282 aaKnown RBP13.02□□□□□ -0.33
PTCH1-215ENST00000547672 DCBLD1Q8N8Z6 715 aa13.02□□□□□ -0.33
PTCH1-215ENST00000547672 TSTD1Q8NFU3 115 aa13.02□□□□□ -0.33
PTCH1-215ENST00000547672 OR2T11Q8NH01 316 aa13.02□□□□□ -0.33
PTCH1-215ENST00000547672 SLC5A11Q8WWX8 675 aa13.02□□□□□ -0.33
PTCH1-215ENST00000547672 PRPF18Q99633 342 aaKnown RBP13.02□□□□□ -0.33
PTCH1-215ENST00000547672 SH3GL1Q99961 368 aa13.02□□□□□ -0.33
PTCH1-215ENST00000547672 OSGEPL1Q9H4B0 414 aa13.02□□□□□ -0.33
PTCH1-215ENST00000547672 NT5DC2Q9H857 520 aa13.02□□□□□ -0.33
PTCH1-215ENST00000547672 PELI2Q9HAT8 420 aa13.02□□□□□ -0.33
PTCH1-215ENST00000547672 AHSPQ9NZD4 102 aa13.02□□□□□ -0.33
PTCH1-215ENST00000547672 ADA2Q9NZK5 511 aa13.02□□□□□ -0.33
PTCH1-215ENST00000547672 STOML1Q9UBI4 398 aa13.02□□□□□ -0.33
PTCH1-215ENST00000547672 SLC23A2Q9UGH3 650 aa13.02□□□□□ -0.33
PTCH1-215ENST00000547672 SLC7A8Q9UHI5 535 aa13.02□□□□□ -0.33
PTCH1-215ENST00000547672 ANGPTL2Q9UKU9 493 aa13.02□□□□□ -0.33
PTCH1-215ENST00000547672 PPT2Q9UMR5 302 aa13.02□□□□□ -0.33
PTCH1-215ENST00000547672 SUFUQ9UMX1 484 aa13.02□□□□□ -0.33
PTCH1-215ENST00000547672 PTGDR2Q9Y5Y4 395 aa13.02□□□□□ -0.33
PTCH1-215ENST00000547672 MEI4A8MW99 385 aa13.01□□□□□ -0.33
PTCH1-215ENST00000547672 EEDO75530 441 aaKnown RBP13.01□□□□□ -0.33
PTCH1-215ENST00000547672 CCNDBP1O95273 360 aa13.01□□□□□ -0.33
PTCH1-215ENST00000547672 ERGP11308 486 aa13.01□□□□□ -0.33
PTCH1-215ENST00000547672 PRPS1L1P21108 318 aa13.01□□□□□ -0.33
PTCH1-215ENST00000547672 ACSL1P33121 698 aa13.01□□□□□ -0.33
PTCH1-215ENST00000547672 ASMTP46597 345 aa13.01□□□□□ -0.33
PTCH1-215ENST00000547672 HTR6P50406 440 aa13.01□□□□□ -0.33
PTCH1-215ENST00000547672 TBPL1P62380 186 aa13.01□□□□□ -0.33
PTCH1-215ENST00000547672 RPL38P63173 70 aaKnown RBP13.01□□□□□ -0.33
PTCH1-215ENST00000547672 LRRC74AQ0VAA2 488 aa13.01□□□□□ -0.33
PTCH1-215ENST00000547672 KPNB1Q14974 876 aaKnown RBP13.01□□□□□ -0.33
PTCH1-215ENST00000547672 RFTN2Q52LD8 501 aaPredicted RBP13.01□□□□□ -0.33
PTCH1-215ENST00000547672 SPIN4Q56A73 249 aa13.01□□□□□ -0.33
PTCH1-215ENST00000547672 PRAMEF14Q5SWL7 426 aa13.01□□□□□ -0.33
PTCH1-215ENST00000547672 PRAMEF13Q5VWM6 474 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms