RNA–Protein interactions for RNA: ENST00000546164.5

YBX3-217, Transcript of Y-box binding protein 3, human

TSL 2

Gene YBX3, Length 805 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
YBX3-217	ENST00000546164	HS3ST6	Q96QI5	342 aa		11.42	□□□□□ -0.58
YBX3-217	ENST00000546164	DPH2	Q9BQC3	489 aa	Predicted RBP	11.42	□□□□□ -0.58
YBX3-217	ENST00000546164	MCMBP	Q9BTE3	642 aa		11.42	□□□□□ -0.58
YBX3-217	ENST00000546164	ACTR5	Q9H9F9	607 aa	Predicted RBP	11.42	□□□□□ -0.58
YBX3-217	ENST00000546164	SAYSD1	Q9NPB0	183 aa		11.42	□□□□□ -0.58
YBX3-217	ENST00000546164	PCMTD2	Q9NV79	361 aa		11.42	□□□□□ -0.58
YBX3-217	ENST00000546164	CAMSAP3	Q9P1Y5	1249 aa	Predicted RBP	11.42	□□□□□ -0.58
YBX3-217	ENST00000546164	VWA7	Q9Y334	891 aa		11.42	□□□□□ -0.58
YBX3-217	ENST00000546164	PSAT1	Q9Y617	370 aa		11.42	□□□□□ -0.58
YBX3-217	ENST00000546164	AP1M2	Q9Y6Q5	423 aa		11.42	□□□□□ -0.58
YBX3-217	ENST00000546164	SNRNP200	O75643	2136 aa	Known RBP	11.41	□□□□□ -0.58
YBX3-217	ENST00000546164		E7ENX8	843 aa		11.41	□□□□□ -0.58
YBX3-217	ENST00000546164	MEN1	O00255	615 aa		11.41	□□□□□ -0.58
YBX3-217	ENST00000546164	SLC16A5	O15375	505 aa		11.41	□□□□□ -0.58
YBX3-217	ENST00000546164	ZNF749	O43361	778 aa		11.41	□□□□□ -0.58
YBX3-217	ENST00000546164	HCRTR1	O43613	425 aa		11.41	□□□□□ -0.58
YBX3-217	ENST00000546164	OR2B3	O76000	313 aa		11.41	□□□□□ -0.58
YBX3-217	ENST00000546164	TSPAN12	O95859	305 aa		11.41	□□□□□ -0.58
YBX3-217	ENST00000546164	SLC16A8	O95907	504 aa		11.41	□□□□□ -0.58
YBX3-217	ENST00000546164	C1QA	P02745	245 aa		11.41	□□□□□ -0.58
YBX3-217	ENST00000546164	KLK3	P07288	261 aa	Predicted RBP	11.41	□□□□□ -0.58
YBX3-217	ENST00000546164	C8G	P07360	202 aa		11.41	□□□□□ -0.58
YBX3-217	ENST00000546164	GRIA3	P42263	894 aa		11.41	□□□□□ -0.58
YBX3-217	ENST00000546164	GCGR	P47871	477 aa		11.41	□□□□□ -0.58
YBX3-217	ENST00000546164	PNLIPRP1	P54315	467 aa		11.41	□□□□□ -0.58
YBX3-217	ENST00000546164	TAP2	Q03519	686 aa		11.41	□□□□□ -0.58
YBX3-217	ENST00000546164	FASTK	Q14296	549 aa	Known RBP	11.41	□□□□□ -0.58
YBX3-217	ENST00000546164	TRADD	Q15628	312 aa		11.41	□□□□□ -0.58
YBX3-217	ENST00000546164	ZC3H12B	Q5HYM0	836 aa	Known RBP	11.41	□□□□□ -0.58
YBX3-217	ENST00000546164	ZNF385C	Q66K41	422 aa	Predicted RBP	11.41	□□□□□ -0.58
YBX3-217	ENST00000546164	FCRL6	Q6DN72	434 aa		11.41	□□□□□ -0.58
YBX3-217	ENST00000546164	TLDC1	Q6P9B6	456 aa		11.41	□□□□□ -0.58
YBX3-217	ENST00000546164	FIGLA	Q6QHK4	219 aa		11.41	□□□□□ -0.58
YBX3-217	ENST00000546164	UBE2R2	Q712K3	238 aa	Predicted RBP	11.41	□□□□□ -0.58
YBX3-217	ENST00000546164	ZC3HC1	Q86WB0	502 aa	Known RBP	11.41	□□□□□ -0.58
YBX3-217	ENST00000546164	FAM20C	Q8IXL6	584 aa		11.41	□□□□□ -0.58
YBX3-217	ENST00000546164	PALM2	Q8IXS6	379 aa		11.41	□□□□□ -0.58
YBX3-217	ENST00000546164	LRRC56	Q8IYG6	542 aa	Predicted RBP	11.41	□□□□□ -0.58
YBX3-217	ENST00000546164	DSEL	Q8IZU8	1212 aa		11.41	□□□□□ -0.58
YBX3-217	ENST00000546164	MYO1H	Q8N1T3	1032 aa		11.41	□□□□□ -0.58
YBX3-217	ENST00000546164	MMGT1	Q8N4V1	131 aa		11.41	□□□□□ -0.58
YBX3-217	ENST00000546164	GPATCH11	Q8N954	259 aa		11.41	□□□□□ -0.58
YBX3-217	ENST00000546164	MNS1	Q8NEH6	495 aa		11.41	□□□□□ -0.58
YBX3-217	ENST00000546164	EEF1AKMT1	Q8WVE0	214 aa		11.41	□□□□□ -0.58
YBX3-217	ENST00000546164	DLG3	Q92796	817 aa		11.41	□□□□□ -0.58
YBX3-217	ENST00000546164	N4BP2L2	Q92802	583 aa	Predicted RBP	11.41	□□□□□ -0.58
YBX3-217	ENST00000546164	RNF31	Q96EP0	1072 aa		11.41	□□□□□ -0.58
YBX3-217	ENST00000546164	PDLIM5	Q96HC4	596 aa	Known RBP	11.41	□□□□□ -0.58
YBX3-217	ENST00000546164	OLFM1	Q99784	485 aa		11.41	□□□□□ -0.58
YBX3-217	ENST00000546164	LRRC1	Q9BTT6	524 aa		11.41	□□□□□ -0.58
YBX3-217	ENST00000546164	GPR87	Q9BY21	358 aa		11.41	□□□□□ -0.58
YBX3-217	ENST00000546164	RHOJ	Q9H4E5	214 aa		11.41	□□□□□ -0.58
YBX3-217	ENST00000546164	AKIRIN1	Q9H9L7	192 aa	Predicted RBP	11.41	□□□□□ -0.58
YBX3-217	ENST00000546164	SMYD2	Q9NRG4	433 aa		11.41	□□□□□ -0.58
YBX3-217	ENST00000546164	EURL	Q9NYK6	297 aa		11.41	□□□□□ -0.58
YBX3-217	ENST00000546164	BOD1L1	Q8NFC6	3051 aa		11.41	□□□□□ -0.58
YBX3-217	ENST00000546164	TCRBV9S1A1T	A0A576	114 aa		11.4	□□□□□ -0.58
YBX3-217	ENST00000546164	OR2A25	A4D2G3	310 aa		11.4	□□□□□ -0.58
YBX3-217	ENST00000546164	NKX2-8	O15522	239 aa		11.4	□□□□□ -0.58
YBX3-217	ENST00000546164	ZSCAN9	O15535	394 aa	Predicted RBP	11.4	□□□□□ -0.58
YBX3-217	ENST00000546164	RAB40AL	P0C0E4	278 aa		11.4	□□□□□ -0.58
YBX3-217	ENST00000546164	TCN2	P20062	427 aa		11.4	□□□□□ -0.58
YBX3-217	ENST00000546164	PSMB5	P28074	263 aa		11.4	□□□□□ -0.58
YBX3-217	ENST00000546164	IMPA1	P29218	277 aa		11.4	□□□□□ -0.58
YBX3-217	ENST00000546164	CMPK1	P30085	196 aa		11.4	□□□□□ -0.58
YBX3-217	ENST00000546164	SSTR1	P30872	391 aa		11.4	□□□□□ -0.58
YBX3-217	ENST00000546164	IL2	P60568	153 aa		11.4	□□□□□ -0.58
YBX3-217	ENST00000546164	CYP4F2	P78329	520 aa		11.4	□□□□□ -0.58
YBX3-217	ENST00000546164	ABAT	P80404	500 aa		11.4	□□□□□ -0.58
YBX3-217	ENST00000546164	GUCY2D	Q02846	1103 aa		11.4	□□□□□ -0.58
YBX3-217	ENST00000546164	RELA	Q04206	551 aa		11.4	□□□□□ -0.58
YBX3-217	ENST00000546164	CDC20	Q12834	499 aa		11.4	□□□□□ -0.58
YBX3-217	ENST00000546164	TBR1	Q16650	682 aa		11.4	□□□□□ -0.58
YBX3-217	ENST00000546164	DEFB110	Q30KQ9	67 aa		11.4	□□□□□ -0.58
YBX3-217	ENST00000546164	TAF1B	Q53T94	588 aa	Predicted RBP	11.4	□□□□□ -0.58
YBX3-217	ENST00000546164	RHBDD2	Q6NTF9	364 aa		11.4	□□□□□ -0.58
YBX3-217	ENST00000546164	RNF44	Q7L0R7	432 aa		11.4	□□□□□ -0.58
YBX3-217	ENST00000546164	STRA8	Q7Z7C7	330 aa		11.4	□□□□□ -0.58
YBX3-217	ENST00000546164	MCAT	Q8IVS2	390 aa	Known RBP	11.4	□□□□□ -0.58
YBX3-217	ENST00000546164	SYTL1	Q8IYJ3	562 aa		11.4	□□□□□ -0.58
YBX3-217	ENST00000546164	PROKR1	Q8TCW9	393 aa		11.4	□□□□□ -0.58
YBX3-217	ENST00000546164	MCOLN3	Q8TDD5	553 aa		11.4	□□□□□ -0.58
YBX3-217	ENST00000546164	ZNF592	Q92610	1267 aa		11.4	□□□□□ -0.58
YBX3-217	ENST00000546164	CDKL2	Q92772	493 aa		11.4	□□□□□ -0.58
YBX3-217	ENST00000546164	MR1	Q95460	341 aa		11.4	□□□□□ -0.58
YBX3-217	ENST00000546164	TRIM44	Q96DX7	344 aa	Predicted RBP	11.4	□□□□□ -0.58
YBX3-217	ENST00000546164	LINGO1	Q96FE5	620 aa		11.4	□□□□□ -0.58
YBX3-217	ENST00000546164	CCDC138	Q96M89	665 aa		11.4	□□□□□ -0.58
YBX3-217	ENST00000546164	MIPEP	Q99797	713 aa		11.4	□□□□□ -0.58
YBX3-217	ENST00000546164	FAM129A	Q9BZQ8	928 aa		11.4	□□□□□ -0.58
YBX3-217	ENST00000546164	SPRTN	Q9H040	489 aa	Predicted RBP	11.4	□□□□□ -0.58
YBX3-217	ENST00000546164	CHST8	Q9H2A9	424 aa		11.4	□□□□□ -0.58
YBX3-217	ENST00000546164	PARVB	Q9HBI1	364 aa		11.4	□□□□□ -0.58
YBX3-217	ENST00000546164	ZDHHC18	Q9NUE0	388 aa		11.4	□□□□□ -0.58
YBX3-217	ENST00000546164	ANKMY1	Q9P2S6	941 aa		11.4	□□□□□ -0.58
YBX3-217	ENST00000546164	SRPK3	Q9UPE1	567 aa		11.4	□□□□□ -0.58
YBX3-217	ENST00000546164	PDE10A	Q9Y233	779 aa		11.4	□□□□□ -0.58
YBX3-217	ENST00000546164	KLHL20	Q9Y2M5	609 aa		11.4	□□□□□ -0.58
YBX3-217	ENST00000546164	COL6A6	A6NMZ7	2263 aa		11.4	□□□□□ -0.58
YBX3-217	ENST00000546164	FASN	P49327	2511 aa	Known RBP	11.39	□□□□□ -0.59

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