RNA–Protein interactions for RNA: ENST00000544223.6

HCFC2-202, Transcript of host cell factor C2, humanhuman

TSL 2

Gene HCFC2, Length 2,538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-202ENST00000544223 DEFB119Q8N690 84 aa13.26□□□□□ -0.29
HCFC2-202ENST00000544223 RLN3Q8WXF3 142 aa13.26□□□□□ -0.29
HCFC2-202ENST00000544223 TFGQ92734 400 aaPredicted RBP13.26□□□□□ -0.29
HCFC2-202ENST00000544223 CCDC138Q96M89 665 aa13.26□□□□□ -0.29
HCFC2-202ENST00000544223 NECTIN4Q96NY8 510 aa13.26□□□□□ -0.29
HCFC2-202ENST00000544223 TEX101Q9BY14 249 aa13.26□□□□□ -0.29
HCFC2-202ENST00000544223 SLC6A13Q9NSD5 602 aa13.26□□□□□ -0.29
HCFC2-202ENST00000544223 CMTM6Q9NX76 183 aa13.26□□□□□ -0.29
HCFC2-202ENST00000544223 SUFUQ9UMX1 484 aa13.26□□□□□ -0.29
HCFC2-202ENST00000544223 COL4A2P08572 1712 aa13.25□□□□□ -0.29
HCFC2-202ENST00000544223 ARHGEF17Q96PE2 2063 aaPredicted RBP13.25□□□□□ -0.29
HCFC2-202ENST00000544223 MAGEB17A8MXT2 336 aa13.25□□□□□ -0.29
HCFC2-202ENST00000544223 LIN7AO14910 233 aaPredicted RBP13.25□□□□□ -0.29
HCFC2-202ENST00000544223 SLC16A5O15375 505 aa13.25□□□□□ -0.29
HCFC2-202ENST00000544223 EML2O95834 649 aa13.25□□□□□ -0.29
HCFC2-202ENST00000544223 CEACAM5P06731 702 aa13.25□□□□□ -0.29
HCFC2-202ENST00000544223 GNPDA1P46926 289 aa13.25□□□□□ -0.29
HCFC2-202ENST00000544223 TPMTP51580 245 aa13.25□□□□□ -0.29
HCFC2-202ENST00000544223 TAP2Q03519 686 aa13.25□□□□□ -0.29
HCFC2-202ENST00000544223 EMX2Q04743 252 aa13.25□□□□□ -0.29
HCFC2-202ENST00000544223 NFYCQ13952 458 aa13.25□□□□□ -0.29
HCFC2-202ENST00000544223 GSTA3Q16772 222 aa13.25□□□□□ -0.29
HCFC2-202ENST00000544223 SPANXN4Q5MJ08 99 aa13.25□□□□□ -0.29
HCFC2-202ENST00000544223 FRG2Q64ET8 278 aa13.25□□□□□ -0.29
HCFC2-202ENST00000544223 NEK10Q6ZWH5 1172 aa13.25□□□□□ -0.29
HCFC2-202ENST00000544223 KIAA2013Q8IYS2 634 aa13.25□□□□□ -0.29
HCFC2-202ENST00000544223 TSACCQ96A04 125 aaPredicted RBP13.25□□□□□ -0.29
HCFC2-202ENST00000544223 FRG2BQ96QU4 278 aa13.25□□□□□ -0.29
HCFC2-202ENST00000544223 C1QTNF2Q9BXJ5 285 aa13.25□□□□□ -0.29
HCFC2-202ENST00000544223 UBE2ZQ9H832 354 aaPredicted RBP13.25□□□□□ -0.29
HCFC2-202ENST00000544223 FGF22Q9HCT0 170 aa13.25□□□□□ -0.29
HCFC2-202ENST00000544223 PRDM8Q9NQV8 689 aa13.25□□□□□ -0.29
HCFC2-202ENST00000544223 IMP3Q9NV31 184 aaKnown RBP13.25□□□□□ -0.29
HCFC2-202ENST00000544223 EBF1Q9UH73 591 aa13.25□□□□□ -0.29
HCFC2-202ENST00000544223 QSOX1O00391 747 aa13.24□□□□□ -0.29
HCFC2-202ENST00000544223 VEGFDO43915 354 aa13.24□□□□□ -0.29
HCFC2-202ENST00000544223 VPS4BO75351 444 aa13.24□□□□□ -0.29
HCFC2-202ENST00000544223 ACADMP11310 421 aa13.24□□□□□ -0.29
HCFC2-202ENST00000544223 NCK1P16333 377 aa13.24□□□□□ -0.29
HCFC2-202ENST00000544223 ME2P23368 584 aa13.24□□□□□ -0.29
HCFC2-202ENST00000544223 AK4P27144 223 aaPredicted RBP13.24□□□□□ -0.29
HCFC2-202ENST00000544223 ATP4BP51164 291 aa13.24□□□□□ -0.29
HCFC2-202ENST00000544223 MTPNP58546 118 aa13.24□□□□□ -0.29
HCFC2-202ENST00000544223 KIAA0040Q15053 153 aa13.24□□□□□ -0.29
HCFC2-202ENST00000544223 MAPRE2Q15555 327 aa13.24□□□□□ -0.29
HCFC2-202ENST00000544223 GTDC1Q4AE62 458 aa13.24□□□□□ -0.29
HCFC2-202ENST00000544223 ZNF542PQ5EBM4 170 aa13.24□□□□□ -0.29
HCFC2-202ENST00000544223 FAM180BQ6P0A1 224 aa13.24□□□□□ -0.29
HCFC2-202ENST00000544223 TRIM46Q7Z4K8 759 aa13.24□□□□□ -0.29
HCFC2-202ENST00000544223 SFTPA2Q8IWL1 248 aa13.24□□□□□ -0.29
HCFC2-202ENST00000544223 FAM3CQ92520 227 aa13.24□□□□□ -0.29
HCFC2-202ENST00000544223 LRRC58Q96CX6 371 aa13.24□□□□□ -0.29
HCFC2-202ENST00000544223 PDXPQ96GD0 296 aa13.24□□□□□ -0.29
HCFC2-202ENST00000544223 SGK2Q9HBY8 427 aa13.24□□□□□ -0.29
HCFC2-202ENST00000544223 S100A14Q9HCY8 104 aa13.24□□□□□ -0.29
HCFC2-202ENST00000544223 SPAG4Q9NPE6 437 aa13.24□□□□□ -0.29
HCFC2-202ENST00000544223 NOP53Q9NZM5 478 aaKnown RBP13.24□□□□□ -0.29
HCFC2-202ENST00000544223 PLXND1Q9Y4D7 1925 aa13.24□□□□□ -0.29
HCFC2-202ENST00000544223 H3BNX3 289 aa13.24□□□□□ -0.29
HCFC2-202ENST00000544223 AP1G1O43747 822 aa13.24□□□□□ -0.29
HCFC2-202ENST00000544223 KRT6AP02538 564 aa13.24□□□□□ -0.29
HCFC2-202ENST00000544223 KRT6BP04259 564 aa13.24□□□□□ -0.29
HCFC2-202ENST00000544223 GSNP06396 782 aa13.24□□□□□ -0.29
HCFC2-202ENST00000544223 GABRG2P18507 467 aa13.24□□□□□ -0.29
HCFC2-202ENST00000544223 SLC6A2P23975 617 aa13.24□□□□□ -0.29
HCFC2-202ENST00000544223 TRIM23P36406 574 aa13.24□□□□□ -0.29
HCFC2-202ENST00000544223 KRT6CP48668 564 aa13.24□□□□□ -0.29
HCFC2-202ENST00000544223 PHC1P78364 1004 aa13.24□□□□□ -0.29
HCFC2-202ENST00000544223 CLCA4Q14CN2 919 aa13.24□□□□□ -0.29
HCFC2-202ENST00000544223 TLR1Q15399 786 aa13.24□□□□□ -0.29
HCFC2-202ENST00000544223 MLF2Q15773 248 aaPredicted RBP13.24□□□□□ -0.29
HCFC2-202ENST00000544223 ANO7Q6IWH7 933 aa13.24□□□□□ -0.29
HCFC2-202ENST00000544223 EFL1Q7Z2Z2 1120 aaKnown RBP13.24□□□□□ -0.29
HCFC2-202ENST00000544223 SPATA24Q86W54 205 aa13.24□□□□□ -0.29
HCFC2-202ENST00000544223 PLD3Q8IV08 490 aa13.24□□□□□ -0.29
HCFC2-202ENST00000544223 HM13Q8TCT9 377 aa13.24□□□□□ -0.29
HCFC2-202ENST00000544223 EPHX3Q9H6B9 360 aa13.24□□□□□ -0.29
HCFC2-202ENST00000544223 LMCD1Q9NZU5 365 aa13.24□□□□□ -0.29
HCFC2-202ENST00000544223 GPR34Q9UPC5 381 aa13.24□□□□□ -0.29
HCFC2-202ENST00000544223 INVSQ9Y283 1065 aa13.24□□□□□ -0.29
HCFC2-202ENST00000544223 V9GYQ6 96 aa13.24□□□□□ -0.29
HCFC2-202ENST00000544223 HEATR5BQ9P2D3 2071 aa13.24□□□□□ -0.29
HCFC2-202ENST00000544223 A0A1W2PP18 115 aa13.23□□□□□ -0.29
HCFC2-202ENST00000544223 ACOT8O14734 319 aa13.23□□□□□ -0.29
HCFC2-202ENST00000544223 MTHFD1P11586 935 aaKnown RBP13.23□□□□□ -0.29
HCFC2-202ENST00000544223 SLC34A1Q06495 639 aa13.23□□□□□ -0.29
HCFC2-202ENST00000544223 CCINQ13939 588 aa13.23□□□□□ -0.29
HCFC2-202ENST00000544223 COL19A1Q14993 1142 aa13.23□□□□□ -0.29
HCFC2-202ENST00000544223 C6orf10Q5SRN2 563 aa13.23□□□□□ -0.29
HCFC2-202ENST00000544223 HORMAD1Q86X24 394 aa13.23□□□□□ -0.29
HCFC2-202ENST00000544223 SLC15A3Q8IY34 581 aa13.23□□□□□ -0.29
HCFC2-202ENST00000544223 KIRREL3Q8IZU9 778 aa13.23□□□□□ -0.29
HCFC2-202ENST00000544223 L3MBTL4Q8NA19 623 aa13.23□□□□□ -0.29
HCFC2-202ENST00000544223 OR9A1PQ8NGU1 263 aa13.23□□□□□ -0.29
HCFC2-202ENST00000544223 AURKBQ96GD4 344 aaPredicted RBP13.23□□□□□ -0.29
HCFC2-202ENST00000544223 INSM2Q96T92 566 aaPredicted RBP13.23□□□□□ -0.29
HCFC2-202ENST00000544223 SORBS1Q9BX66 1292 aaKnown RBP13.23□□□□□ -0.29
HCFC2-202ENST00000544223 PRDM6Q9NQX0 595 aa13.23□□□□□ -0.29
HCFC2-202ENST00000544223 CUEDC1Q9NWM3 386 aaPredicted RBP13.23□□□□□ -0.29
HCFC2-202ENST00000544223 NMRK1Q9NWW6 199 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms