RNA–Protein interactions for RNA: ENST00000543633.5

VPS33A-208, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 2,019 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-208ENST00000543633 MTAPQ13126 283 aa13.37□□□□□ -0.27
VPS33A-208ENST00000543633 BCL2A1Q16548 175 aa13.37□□□□□ -0.27
VPS33A-208ENST00000543633 GPR33Q49SQ1 333 aa13.37□□□□□ -0.27
VPS33A-208ENST00000543633 PERM1Q5SV97 790 aa13.37□□□□□ -0.27
VPS33A-208ENST00000543633 RNF219Q5W0B1 726 aaPredicted RBP13.37□□□□□ -0.27
VPS33A-208ENST00000543633 CADM3Q8N126 398 aa13.37□□□□□ -0.27
VPS33A-208ENST00000543633 ACPTQ9BZG2 426 aa13.37□□□□□ -0.27
VPS33A-208ENST00000543633 SLIRPQ9GZT3 109 aaKnown RBP13.37□□□□□ -0.27
VPS33A-208ENST00000543633 FARSBQ9NSD9 589 aaKnown RBP13.37□□□□□ -0.27
VPS33A-208ENST00000543633 SNX6Q9UNH7 406 aa13.37□□□□□ -0.27
VPS33A-208ENST00000543633 OR2A25A4D2G3 310 aa13.37□□□□□ -0.27
VPS33A-208ENST00000543633 HTR3EA5X5Y0 456 aa13.37□□□□□ -0.27
VPS33A-208ENST00000543633 FAM20BO75063 409 aa13.37□□□□□ -0.27
VPS33A-208ENST00000543633 GUCA1CO95843 209 aa13.37□□□□□ -0.27
VPS33A-208ENST00000543633 FABP3P05413 133 aa13.37□□□□□ -0.27
VPS33A-208ENST00000543633 ANXA5P08758 320 aa13.37□□□□□ -0.27
VPS33A-208ENST00000543633 ACRV1P26436 265 aa13.37□□□□□ -0.27
VPS33A-208ENST00000543633 PSMB9P28065 219 aa13.37□□□□□ -0.27
VPS33A-208ENST00000543633 FMO3P31513 532 aa13.37□□□□□ -0.27
VPS33A-208ENST00000543633 MAGEA10P43363 369 aaPredicted RBP13.37□□□□□ -0.27
VPS33A-208ENST00000543633 PTPN5P54829 565 aa13.37□□□□□ -0.27
VPS33A-208ENST00000543633 ITGA1P56199 1179 aa13.37□□□□□ -0.27
VPS33A-208ENST00000543633 PHC1P78364 1004 aa13.37□□□□□ -0.27
VPS33A-208ENST00000543633 TEKQ02763 1124 aa13.37□□□□□ -0.27
VPS33A-208ENST00000543633 ZNF33BQ06732 778 aa13.37□□□□□ -0.27
VPS33A-208ENST00000543633 ELAVL2Q12926 359 aaKnown RBP13.37□□□□□ -0.27
VPS33A-208ENST00000543633 NFATC2Q13469 925 aa13.37□□□□□ -0.27
VPS33A-208ENST00000543633 PHKG1Q16816 387 aa13.37□□□□□ -0.27
VPS33A-208ENST00000543633 ARMC12Q5T9G4 340 aa13.37□□□□□ -0.27
VPS33A-208ENST00000543633 FAM171A1Q5VUB5 890 aa13.37□□□□□ -0.27
VPS33A-208ENST00000543633 KIAA1614Q5VZ46 1190 aa13.37□□□□□ -0.27
VPS33A-208ENST00000543633 CXorf57Q6NSI4 855 aaKnown RBP13.37□□□□□ -0.27
VPS33A-208ENST00000543633 FAHD1Q6P587 224 aa13.37□□□□□ -0.27
VPS33A-208ENST00000543633 TTC29Q8NA56 475 aaPredicted RBP13.37□□□□□ -0.27
VPS33A-208ENST00000543633 RHOXF1Q8NHV9 184 aa13.37□□□□□ -0.27
VPS33A-208ENST00000543633 LKAAEAR1Q8TD35 194 aa13.37□□□□□ -0.27
VPS33A-208ENST00000543633 FCRL1Q96LA6 429 aa13.37□□□□□ -0.27
VPS33A-208ENST00000543633 SLC32A1Q9H598 525 aa13.37□□□□□ -0.27
VPS33A-208ENST00000543633 SLC6A13Q9NSD5 602 aa13.37□□□□□ -0.27
VPS33A-208ENST00000543633 THG1LQ9NWX6 298 aaKnown RBP13.37□□□□□ -0.27
VPS33A-208ENST00000543633 KCTD5Q9NXV2 234 aa13.37□□□□□ -0.27
VPS33A-208ENST00000543633 ANKMY1Q9P2S6 941 aa13.37□□□□□ -0.27
VPS33A-208ENST00000543633 EVLQ9UI08 416 aaPredicted RBP13.37□□□□□ -0.27
VPS33A-208ENST00000543633 UGT2A1Q9Y4X1 527 aa13.37□□□□□ -0.27
VPS33A-208ENST00000543633 PMF1-BGLAPU3KQ54 211 aa13.37□□□□□ -0.27
VPS33A-208ENST00000543633 SLC25A14O95258 325 aaPredicted RBP13.36□□□□□ -0.27
VPS33A-208ENST00000543633 PGLSO95336 258 aa13.36□□□□□ -0.27
VPS33A-208ENST00000543633 SEC24AO95486 1093 aa13.36□□□□□ -0.27
VPS33A-208ENST00000543633 NR4A1P22736 598 aa13.36□□□□□ -0.27
VPS33A-208ENST00000543633 HOXD10P28358 340 aa13.36□□□□□ -0.27
VPS33A-208ENST00000543633 TGFBR2P37173 567 aa13.36□□□□□ -0.27
VPS33A-208ENST00000543633 EIF2DP41214 584 aaKnown RBP13.36□□□□□ -0.27
VPS33A-208ENST00000543633 PPP3CCP48454 512 aa13.36□□□□□ -0.27
VPS33A-208ENST00000543633 IFITM3Q01628 133 aa13.36□□□□□ -0.27
VPS33A-208ENST00000543633 TWF1Q12792 350 aa13.36□□□□□ -0.27
VPS33A-208ENST00000543633 GBX1Q14549 363 aa13.36□□□□□ -0.27
VPS33A-208ENST00000543633 CARD16Q5EG05 197 aa13.36□□□□□ -0.27
VPS33A-208ENST00000543633 PAGE2BQ5JRK9 111 aa13.36□□□□□ -0.27
VPS33A-208ENST00000543633 ADGRF1Q5T601 910 aa13.36□□□□□ -0.27
VPS33A-208ENST00000543633 EIF3MQ7L2H7 374 aaKnown RBP13.36□□□□□ -0.27
VPS33A-208ENST00000543633 GPR155Q7Z3F1 870 aa13.36□□□□□ -0.27
VPS33A-208ENST00000543633 CYP2U1Q7Z449 544 aa13.36□□□□□ -0.27
VPS33A-208ENST00000543633 ZNF540Q8NDQ6 660 aa13.36□□□□□ -0.27
VPS33A-208ENST00000543633 CSGALNACT1Q8TDX6 532 aa13.36□□□□□ -0.27
VPS33A-208ENST00000543633 SLC38A4Q969I6 547 aa13.36□□□□□ -0.27
VPS33A-208ENST00000543633 APOL5Q9BWW9 433 aa13.36□□□□□ -0.27
VPS33A-208ENST00000543633 GABARAPL3Q9BY60 117 aa13.36□□□□□ -0.27
VPS33A-208ENST00000543633 CEP44Q9C0F1 390 aa13.36□□□□□ -0.27
VPS33A-208ENST00000543633 MMP27Q9H306 513 aa13.36□□□□□ -0.27
VPS33A-208ENST00000543633 CRISPLD1Q9H336 500 aa13.36□□□□□ -0.27
VPS33A-208ENST00000543633 DSN1Q9H410 356 aa13.36□□□□□ -0.27
VPS33A-208ENST00000543633 EXD2Q9NVH0 621 aa13.36□□□□□ -0.27
VPS33A-208ENST00000543633 FBXO10Q9UK96 956 aa13.36□□□□□ -0.27
VPS33A-208ENST00000543633 FNDC3AQ9Y2H6 1198 aaKnown RBP13.36□□□□□ -0.27
VPS33A-208ENST00000543633 U3KQV3 271 aa13.36□□□□□ -0.27
VPS33A-208ENST00000543633 H0Y626 953 aa13.35□□□□□ -0.27
VPS33A-208ENST00000543633 RFXANKO14593 260 aa13.35□□□□□ -0.27
VPS33A-208ENST00000543633 AXIN1O15169 862 aa13.35□□□□□ -0.27
VPS33A-208ENST00000543633 MITFO75030 526 aaPredicted RBP13.35□□□□□ -0.27
VPS33A-208ENST00000543633 TRIM16O95361 564 aa13.35□□□□□ -0.27
VPS33A-208ENST00000543633 LATS1O95835 1130 aa13.35□□□□□ -0.27
VPS33A-208ENST00000543633 GNRH1P01148 92 aa13.35□□□□□ -0.27
VPS33A-208ENST00000543633 CST5P28325 142 aaPredicted RBP13.35□□□□□ -0.27
VPS33A-208ENST00000543633 MAP2K4P45985 399 aa13.35□□□□□ -0.27
VPS33A-208ENST00000543633 PXNP49023 591 aaPredicted RBP13.35□□□□□ -0.27
VPS33A-208ENST00000543633 C21orf58P58505 322 aa13.35□□□□□ -0.27
VPS33A-208ENST00000543633 ZNF181Q2M3W8 571 aa13.35□□□□□ -0.27
VPS33A-208ENST00000543633 VMACQ2NL98 169 aa13.35□□□□□ -0.27
VPS33A-208ENST00000543633 CCDC92Q53HC0 331 aaPredicted RBP13.35□□□□□ -0.27
VPS33A-208ENST00000543633 HECTD3Q5T447 861 aa13.35□□□□□ -0.27
VPS33A-208ENST00000543633 MLIPQ5VWP3 458 aa13.35□□□□□ -0.27
VPS33A-208ENST00000543633 CCSAPQ6IQ19 270 aaPredicted RBP13.35□□□□□ -0.27
VPS33A-208ENST00000543633 RNF19BQ6ZMZ0 732 aa13.35□□□□□ -0.27
VPS33A-208ENST00000543633 CBLL1Q75N03 491 aa13.35□□□□□ -0.27
VPS33A-208ENST00000543633 CEP68Q76N32 757 aa13.35□□□□□ -0.27
VPS33A-208ENST00000543633 RTN4RL1Q86UN2 441 aaPredicted RBP13.35□□□□□ -0.27
VPS33A-208ENST00000543633 HORMAD1Q86X24 394 aa13.35□□□□□ -0.27
VPS33A-208ENST00000543633 PLD3Q8IV08 490 aa13.35□□□□□ -0.27
VPS33A-208ENST00000543633 DENND1CQ8IV53 801 aa13.35□□□□□ -0.27
VPS33A-208ENST00000543633 CBARPQ8N350 705 aaPredicted RBP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms