RNA–Protein interactions for RNA: ENST00000541959.5

ARF3-208, Transcript of ADP ribosylation factor 3, human

APPRIS P1 TSL 5 BASIC

Gene ARF3, Length 807 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARF3-208	ENST00000541959	LSM14A	Q8ND56	463 aa	Known RBP	18.91	■□□□□ 0.62
ARF3-208	ENST00000541959	OR8K5	Q8NH50	307 aa		18.91	■□□□□ 0.62
ARF3-208	ENST00000541959	OR1L3	Q8NH93	324 aa		18.91	■□□□□ 0.62
ARF3-208	ENST00000541959	ALKBH8	Q96BT7	664 aa	Known RBP	18.91	■□□□□ 0.62
ARF3-208	ENST00000541959	CDC42EP4	Q9H3Q1	356 aa	Known RBP	18.91	■□□□□ 0.62
ARF3-208	ENST00000541959	CAB39L	Q9H9S4	337 aa		18.91	■□□□□ 0.62
ARF3-208	ENST00000541959	SYTL2	Q9HCH5	934 aa		18.91	■□□□□ 0.62
ARF3-208	ENST00000541959	GPAM	Q9HCL2	828 aa		18.91	■□□□□ 0.62
ARF3-208	ENST00000541959	FAM60A	Q9NP50	221 aa		18.91	■□□□□ 0.62
ARF3-208	ENST00000541959	SERTAD3	Q9UJW9	196 aa		18.91	■□□□□ 0.62
ARF3-208	ENST00000541959	NFU1	Q9UMS0	254 aa		18.91	■□□□□ 0.62
ARF3-208	ENST00000541959	PDE10A	Q9Y233	779 aa		18.91	■□□□□ 0.62
ARF3-208	ENST00000541959	TMEM184B	Q9Y519	407 aa	Predicted RBP	18.91	■□□□□ 0.62
ARF3-208	ENST00000541959	SPTB	P11277	2137 aa		18.91	■□□□□ 0.62
ARF3-208	ENST00000541959	ACSL3	O95573	720 aa		18.9	■□□□□ 0.62
ARF3-208	ENST00000541959	DLGAP3	O95886	979 aa		18.9	■□□□□ 0.62
ARF3-208	ENST00000541959	HIST1H2AG	P0C0S8	130 aa	Predicted RBP	18.9	■□□□□ 0.62
ARF3-208	ENST00000541959	HIST1H2AD	P20671	130 aa		18.9	■□□□□ 0.62
ARF3-208	ENST00000541959	CMPK1	P30085	196 aa		18.9	■□□□□ 0.62
ARF3-208	ENST00000541959	ITGA1	P56199	1179 aa		18.9	■□□□□ 0.62
ARF3-208	ENST00000541959	POU4F1	Q01851	419 aa		18.9	■□□□□ 0.62
ARF3-208	ENST00000541959	ILF2	Q12905	390 aa	Known RBP	18.9	■□□□□ 0.62
ARF3-208	ENST00000541959	SP140	Q13342	867 aa		18.9	■□□□□ 0.62
ARF3-208	ENST00000541959	SLMAP	Q14BN4	828 aa		18.9	■□□□□ 0.62
ARF3-208	ENST00000541959	ARHGAP19	Q14CB8	494 aa		18.9	■□□□□ 0.62
ARF3-208	ENST00000541959	GRTP1	Q5TC63	336 aa		18.9	■□□□□ 0.62
ARF3-208	ENST00000541959	PRAMEF17	Q5VTA0	474 aa		18.9	■□□□□ 0.62
ARF3-208	ENST00000541959	KIAA1614	Q5VZ46	1190 aa		18.9	■□□□□ 0.62
ARF3-208	ENST00000541959	MBOAT1	Q6ZNC8	495 aa		18.9	■□□□□ 0.62
ARF3-208	ENST00000541959	GPR135	Q8IZ08	494 aa		18.9	■□□□□ 0.62
ARF3-208	ENST00000541959	NKAP	Q8N5F7	415 aa	Known RBP	18.9	■□□□□ 0.62
ARF3-208	ENST00000541959	ESX1	Q8N693	406 aa		18.9	■□□□□ 0.62
ARF3-208	ENST00000541959	HMGCLL1	Q8TB92	370 aa		18.9	■□□□□ 0.62
ARF3-208	ENST00000541959	ZNF480	Q8WV37	535 aa		18.9	■□□□□ 0.62
ARF3-208	ENST00000541959	SLC39A7	Q92504	469 aa		18.9	■□□□□ 0.62
ARF3-208	ENST00000541959	TSPAN17	Q96FV3	270 aa		18.9	■□□□□ 0.62
ARF3-208	ENST00000541959	HIST1H2AH	Q96KK5	128 aa		18.9	■□□□□ 0.62
ARF3-208	ENST00000541959	HIST1H2AJ	Q99878	128 aa		18.9	■□□□□ 0.62
ARF3-208	ENST00000541959	H2AFJ	Q9BTM1	129 aa		18.9	■□□□□ 0.62
ARF3-208	ENST00000541959	TRIM54	Q9BYV2	358 aa		18.9	■□□□□ 0.62
ARF3-208	ENST00000541959	PARVB	Q9HBI1	364 aa		18.9	■□□□□ 0.62
ARF3-208	ENST00000541959	TAC3	Q9UHF0	121 aa		18.9	■□□□□ 0.62
ARF3-208	ENST00000541959	KALRN	O60229	2985 aa		18.9	■□□□□ 0.62
ARF3-208	ENST00000541959	PCM1	Q15154	2024 aa		18.9	■□□□□ 0.62
ARF3-208	ENST00000541959	COL6A6	A6NMZ7	2263 aa		18.89	■□□□□ 0.61
ARF3-208	ENST00000541959		A0A1W2PPV9	198 aa		18.89	■□□□□ 0.61
ARF3-208	ENST00000541959	ERVH48-1	M5A8F1	160 aa		18.89	■□□□□ 0.61
ARF3-208	ENST00000541959	SLC16A5	O15375	505 aa		18.89	■□□□□ 0.61
ARF3-208	ENST00000541959	PHGDH	O43175	533 aa	Known RBP	18.89	■□□□□ 0.61
ARF3-208	ENST00000541959	TSPAN12	O95859	305 aa		18.89	■□□□□ 0.61
ARF3-208	ENST00000541959	ATXN8OS	P0DMR3	200 aa		18.89	■□□□□ 0.61
ARF3-208	ENST00000541959	ERG	P11308	486 aa		18.89	■□□□□ 0.61
ARF3-208	ENST00000541959	ZNF37A	P17032	561 aa	Predicted RBP	18.89	■□□□□ 0.61
ARF3-208	ENST00000541959	GRIA3	P42263	894 aa		18.89	■□□□□ 0.61
ARF3-208	ENST00000541959	NAB1	Q13506	487 aa		18.89	■□□□□ 0.61
ARF3-208	ENST00000541959	UBAP2	Q5T6F2	1119 aa	Known RBP	18.89	■□□□□ 0.61
ARF3-208	ENST00000541959	PCSK4	Q6UW60	755 aa		18.89	■□□□□ 0.61
ARF3-208	ENST00000541959	TMEM207	Q6UWW9	146 aa		18.89	■□□□□ 0.61
ARF3-208	ENST00000541959	CEP97	Q8IW35	865 aa		18.89	■□□□□ 0.61
ARF3-208	ENST00000541959	OR2L3	Q8NG85	312 aa		18.89	■□□□□ 0.61
ARF3-208	ENST00000541959	DLG3	Q92796	817 aa		18.89	■□□□□ 0.61
ARF3-208	ENST00000541959	KIAA1143	Q96AT1	154 aa	Predicted RBP	18.89	■□□□□ 0.61
ARF3-208	ENST00000541959	CLIP3	Q96DZ5	547 aa		18.89	■□□□□ 0.61
ARF3-208	ENST00000541959	MED8	Q96G25	268 aa		18.89	■□□□□ 0.61
ARF3-208	ENST00000541959	CCDC138	Q96M89	665 aa		18.89	■□□□□ 0.61
ARF3-208	ENST00000541959	SLC12A9	Q9BXP2	914 aa		18.89	■□□□□ 0.61
ARF3-208	ENST00000541959	SPRY4	Q9C004	299 aa		18.89	■□□□□ 0.61
ARF3-208	ENST00000541959	UNK	Q9C0B0	810 aa	Known RBP	18.89	■□□□□ 0.61
ARF3-208	ENST00000541959	MRPS30	Q9NP92	439 aa	Known RBP	18.89	■□□□□ 0.61
ARF3-208	ENST00000541959	NPEPPSL1	A6NEC2	478 aa		18.88	■□□□□ 0.61
ARF3-208	ENST00000541959		E7EQ34	232 aa		18.88	■□□□□ 0.61
ARF3-208	ENST00000541959	TK2	O00142	265 aa		18.88	■□□□□ 0.61
ARF3-208	ENST00000541959	PRICKLE3	O43900	615 aa	Predicted RBP	18.88	■□□□□ 0.61
ARF3-208	ENST00000541959	CPNE3	O75131	537 aa	Known RBP	18.88	■□□□□ 0.61
ARF3-208	ENST00000541959	FKBP9	O95302	570 aa		18.88	■□□□□ 0.61
ARF3-208	ENST00000541959	GUCA1C	O95843	209 aa		18.88	■□□□□ 0.61
ARF3-208	ENST00000541959	C1QA	P02745	245 aa		18.88	■□□□□ 0.61
ARF3-208	ENST00000541959	CCNYL3	P0C7X3	344 aa		18.88	■□□□□ 0.61
ARF3-208	ENST00000541959	STMN1	P16949	149 aa		18.88	■□□□□ 0.61
ARF3-208	ENST00000541959	IMPA1	P29218	277 aa		18.88	■□□□□ 0.61
ARF3-208	ENST00000541959	ECHS1	P30084	290 aa		18.88	■□□□□ 0.61
ARF3-208	ENST00000541959	COL9A2	Q14055	689 aa	Predicted RBP	18.88	■□□□□ 0.61
ARF3-208	ENST00000541959	PHKG1	Q16816	387 aa		18.88	■□□□□ 0.61
ARF3-208	ENST00000541959	OR2A1	Q8NGT9	310 aa		18.88	■□□□□ 0.61
ARF3-208	ENST00000541959	UHMK1	Q8TAS1	419 aa	Known RBP	18.88	■□□□□ 0.61
ARF3-208	ENST00000541959	FCRL4	Q96PJ5	515 aa		18.88	■□□□□ 0.61
ARF3-208	ENST00000541959	CYTH2	Q99418	400 aa		18.88	■□□□□ 0.61
ARF3-208	ENST00000541959	GPR22	Q99680	433 aa		18.88	■□□□□ 0.61
ARF3-208	ENST00000541959	TWSG1	Q9GZX9	223 aa		18.88	■□□□□ 0.61
ARF3-208	ENST00000541959	GPN2	Q9H9Y4	310 aa	Predicted RBP	18.88	■□□□□ 0.61
ARF3-208	ENST00000541959	ARL15	Q9NXU5	204 aa		18.88	■□□□□ 0.61
ARF3-208	ENST00000541959	UTP6	Q9NYH9	597 aa	Known RBP	18.88	■□□□□ 0.61
ARF3-208	ENST00000541959	STOX2	Q9P2F5	926 aa	Predicted RBP	18.88	■□□□□ 0.61
ARF3-208	ENST00000541959	PLCL2	Q9UPR0	1127 aa		18.88	■□□□□ 0.61
ARF3-208	ENST00000541959	LOC101059948	A0A1B0GTJ6	334 aa		18.87	■□□□□ 0.61
ARF3-208	ENST00000541959		E7ENX8	843 aa		18.87	■□□□□ 0.61
ARF3-208	ENST00000541959	HCRTR1	O43613	425 aa		18.87	■□□□□ 0.61
ARF3-208	ENST00000541959	OR2B3	O76000	313 aa		18.87	■□□□□ 0.61
ARF3-208	ENST00000541959	CCNDBP1	O95273	360 aa		18.87	■□□□□ 0.61
ARF3-208	ENST00000541959	MT-ND3	P03897	115 aa		18.87	■□□□□ 0.61

Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms