RNA–Protein interactions for RNA: ENST00000540904.1

SNHG1-215, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-215ENST00000540904 KBTBD12Q3ZCT8 623 aa8.88□□□□□ -0.99
SNHG1-215ENST00000540904 FIGLAQ6QHK4 219 aa8.88□□□□□ -0.99
SNHG1-215ENST00000540904 TMEM207Q6UWW9 146 aa8.88□□□□□ -0.99
SNHG1-215ENST00000540904 MBOAT1Q6ZNC8 495 aa8.88□□□□□ -0.99
SNHG1-215ENST00000540904 GPR135Q8IZ08 494 aa8.88□□□□□ -0.99
SNHG1-215ENST00000540904 DNAJC22Q8N4W6 341 aa8.88□□□□□ -0.99
SNHG1-215ENST00000540904 PPM1NQ8N819 430 aa8.88□□□□□ -0.99
SNHG1-215ENST00000540904 ZSCAN1Q8NBB4 408 aa8.88□□□□□ -0.99
SNHG1-215ENST00000540904 FBXO15Q8NCQ5 510 aaPredicted RBP8.88□□□□□ -0.99
SNHG1-215ENST00000540904 OR2L3Q8NG85 312 aa8.88□□□□□ -0.99
SNHG1-215ENST00000540904 OR2A1Q8NGT9 310 aa8.88□□□□□ -0.99
SNHG1-215ENST00000540904 FBF1Q8TES7 1133 aa8.88□□□□□ -0.99
SNHG1-215ENST00000540904 ZNF480Q8WV37 535 aa8.88□□□□□ -0.99
SNHG1-215ENST00000540904 FMO2Q99518 471 aa8.88□□□□□ -0.99
SNHG1-215ENST00000540904 MCMBPQ9BTE3 642 aa8.88□□□□□ -0.99
SNHG1-215ENST00000540904 SLC12A9Q9BXP2 914 aa8.88□□□□□ -0.99
SNHG1-215ENST00000540904 FAM129AQ9BZQ8 928 aa8.88□□□□□ -0.99
SNHG1-215ENST00000540904 SLC7A5P2Q9GIP4 190 aa8.88□□□□□ -0.99
SNHG1-215ENST00000540904 CAB39LQ9H9S4 337 aa8.88□□□□□ -0.99
SNHG1-215ENST00000540904 PARVBQ9HBI1 364 aa8.88□□□□□ -0.99
SNHG1-215ENST00000540904 IRAK4Q9NWZ3 460 aa8.88□□□□□ -0.99
SNHG1-215ENST00000540904 CROTQ9UKG9 612 aa8.88□□□□□ -0.99
SNHG1-215ENST00000540904 PADI1Q9ULC6 663 aa8.88□□□□□ -0.99
SNHG1-215ENST00000540904 PDE10AQ9Y233 779 aa8.88□□□□□ -0.99
SNHG1-215ENST00000540904 MTO1Q9Y2Z2 717 aaKnown RBP8.88□□□□□ -0.99
SNHG1-215ENST00000540904 PCDHGA4Q9Y5G9 962 aa8.88□□□□□ -0.99
SNHG1-215ENST00000540904 CACNA1BQ00975 2339 aa8.88□□□□□ -0.99
SNHG1-215ENST00000540904 ANKRD11Q6UB99 2663 aaPredicted RBP8.87□□□□□ -0.99
SNHG1-215ENST00000540904 KMT2BQ9UMN6 2715 aaPredicted RBP8.87□□□□□ -0.99
SNHG1-215ENST00000540904 PABPN1LA6NDY0 278 aaKnown RBP8.87□□□□□ -0.99
SNHG1-215ENST00000540904 E7ENX8 843 aa8.87□□□□□ -0.99
SNHG1-215ENST00000540904 SLC16A5O15375 505 aa8.87□□□□□ -0.99
SNHG1-215ENST00000540904 ZSCAN9O15535 394 aaPredicted RBP8.87□□□□□ -0.99
SNHG1-215ENST00000540904 ZNF749O43361 778 aa8.87□□□□□ -0.99
SNHG1-215ENST00000540904 KATNA1O75449 491 aa8.87□□□□□ -0.99
SNHG1-215ENST00000540904 FAM155BO75949 473 aa8.87□□□□□ -0.99
SNHG1-215ENST00000540904 FKBP9O95302 570 aa8.87□□□□□ -0.99
SNHG1-215ENST00000540904 C1QAP02745 245 aa8.87□□□□□ -0.99
SNHG1-215ENST00000540904 MT-ND3P03897 115 aa8.87□□□□□ -0.99
SNHG1-215ENST00000540904 CTSBP07858 339 aa8.87□□□□□ -0.99
SNHG1-215ENST00000540904 HIST1H2AGP0C0S8 130 aaPredicted RBP8.87□□□□□ -0.99
SNHG1-215ENST00000540904 RHOXF2BP0C7M4 288 aa8.87□□□□□ -0.99
SNHG1-215ENST00000540904 HIST1H2ADP20671 130 aa8.87□□□□□ -0.99
SNHG1-215ENST00000540904 IMPA1P29218 277 aa8.87□□□□□ -0.99
SNHG1-215ENST00000540904 CMPK1P30085 196 aa8.87□□□□□ -0.99
SNHG1-215ENST00000540904 DLSTP36957 453 aa8.87□□□□□ -0.99
SNHG1-215ENST00000540904 GABRA4P48169 554 aa8.87□□□□□ -0.99
SNHG1-215ENST00000540904 CYP4F2P78329 520 aa8.87□□□□□ -0.99
SNHG1-215ENST00000540904 POU4F1Q01851 419 aa8.87□□□□□ -0.99
SNHG1-215ENST00000540904 TAP2Q03519 686 aa8.87□□□□□ -0.99
SNHG1-215ENST00000540904 ILF2Q12905 390 aaKnown RBP8.87□□□□□ -0.99
SNHG1-215ENST00000540904 GPS2Q13227 327 aa8.87□□□□□ -0.99
SNHG1-215ENST00000540904 SP140Q13342 867 aa8.87□□□□□ -0.99
SNHG1-215ENST00000540904 USP10Q14694 798 aaKnown RBP8.87□□□□□ -0.99
SNHG1-215ENST00000540904 PHKG1Q16816 387 aa8.87□□□□□ -0.99
SNHG1-215ENST00000540904 THEMIS2Q5TEJ8 643 aa8.87□□□□□ -0.99
SNHG1-215ENST00000540904 FCRL6Q6DN72 434 aa8.87□□□□□ -0.99
SNHG1-215ENST00000540904 FAM199XQ6PEV8 388 aaPredicted RBP8.87□□□□□ -0.99
SNHG1-215ENST00000540904 CEP128Q6ZU80 1094 aa8.87□□□□□ -0.99
SNHG1-215ENST00000540904 MCATQ8IVS2 390 aaKnown RBP8.87□□□□□ -0.99
SNHG1-215ENST00000540904 CEP97Q8IW35 865 aa8.87□□□□□ -0.99
SNHG1-215ENST00000540904 NKAPQ8N5F7 415 aaKnown RBP8.87□□□□□ -0.99
SNHG1-215ENST00000540904 SLC38A9Q8NBW4 561 aa8.87□□□□□ -0.99
SNHG1-215ENST00000540904 LRRN4CLQ8ND94 238 aa8.87□□□□□ -0.99
SNHG1-215ENST00000540904 ZUFSPQ96AP4 578 aa8.87□□□□□ -0.99
SNHG1-215ENST00000540904 CLIP3Q96DZ5 547 aa8.87□□□□□ -0.99
SNHG1-215ENST00000540904 MRRFQ96E11 262 aaKnown RBP8.87□□□□□ -0.99
SNHG1-215ENST00000540904 MED8Q96G25 268 aa8.87□□□□□ -0.99
SNHG1-215ENST00000540904 HIST1H2AHQ96KK5 128 aa8.87□□□□□ -0.99
SNHG1-215ENST00000540904 CCDC138Q96M89 665 aa8.87□□□□□ -0.99
SNHG1-215ENST00000540904 RBBP8Q99708 897 aa8.87□□□□□ -0.99
SNHG1-215ENST00000540904 HIST1H2AJQ99878 128 aa8.87□□□□□ -0.99
SNHG1-215ENST00000540904 RHOXF2Q9BQY4 288 aa8.87□□□□□ -0.99
SNHG1-215ENST00000540904 H2AFJQ9BTM1 129 aa8.87□□□□□ -0.99
SNHG1-215ENST00000540904 TRIM54Q9BYV2 358 aa8.87□□□□□ -0.99
SNHG1-215ENST00000540904 CHRNA10Q9GZZ6 450 aa8.87□□□□□ -0.99
SNHG1-215ENST00000540904 SPRTNQ9H040 489 aaPredicted RBP8.87□□□□□ -0.99
SNHG1-215ENST00000540904 TSPYL1Q9H0U9 437 aa8.87□□□□□ -0.99
SNHG1-215ENST00000540904 ACTR5Q9H9F9 607 aaPredicted RBP8.87□□□□□ -0.99
SNHG1-215ENST00000540904 AKIRIN1Q9H9L7 192 aaPredicted RBP8.87□□□□□ -0.99
SNHG1-215ENST00000540904 GPAMQ9HCL2 828 aa8.87□□□□□ -0.99
SNHG1-215ENST00000540904 MRPS30Q9NP92 439 aaKnown RBP8.87□□□□□ -0.99
SNHG1-215ENST00000540904 LHX9Q9NQ69 397 aa8.87□□□□□ -0.99
SNHG1-215ENST00000540904 ARL15Q9NXU5 204 aa8.87□□□□□ -0.99
SNHG1-215ENST00000540904 EURLQ9NYK6 297 aa8.87□□□□□ -0.99
SNHG1-215ENST00000540904 STOX2Q9P2F5 926 aaPredicted RBP8.87□□□□□ -0.99
SNHG1-215ENST00000540904 TAC3Q9UHF0 121 aa8.87□□□□□ -0.99
SNHG1-215ENST00000540904 IL17BQ9UHF5 180 aa8.87□□□□□ -0.99
SNHG1-215ENST00000540904 PLCL2Q9UPR0 1127 aa8.87□□□□□ -0.99
SNHG1-215ENST00000540904 PKD1L2Q7Z442 2459 aa8.87□□□□□ -0.99
SNHG1-215ENST00000540904 SDK2Q58EX2 2172 aa8.86□□□□□ -0.99
SNHG1-215ENST00000540904 AHCTF1Q8WYP5 2266 aa8.86□□□□□ -0.99
SNHG1-215ENST00000540904 NPEPPSL1A6NEC2 478 aa8.86□□□□□ -0.99
SNHG1-215ENST00000540904 ZNF891A8MT65 544 aaPredicted RBP8.86□□□□□ -0.99
SNHG1-215ENST00000540904 TARM1B6A8C7 271 aa8.86□□□□□ -0.99
SNHG1-215ENST00000540904 MEN1O00255 615 aa8.86□□□□□ -0.99
SNHG1-215ENST00000540904 CDC7O00311 574 aa8.86□□□□□ -0.99
SNHG1-215ENST00000540904 PHGDHO43175 533 aaKnown RBP8.86□□□□□ -0.99
SNHG1-215ENST00000540904 NRP2O60462 931 aa8.86□□□□□ -0.99
SNHG1-215ENST00000540904 CTSVO60911 334 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms