RNA–Protein interactions for RNA: ENST00000540562.1

INO80E-203, Transcript of INO80 complex subunit E, humanhuman

TSL 2

Gene INO80E, Length 3,064 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
INO80E-203ENST00000540562 HIST1H2ADP20671 130 aa13.73□□□□□ -0.21
INO80E-203ENST00000540562 IDH2P48735 452 aaKnown RBP13.73□□□□□ -0.21
INO80E-203ENST00000540562 CLCN4P51793 760 aa13.73□□□□□ -0.21
INO80E-203ENST00000540562 GP2P55259 537 aaKnown RBP13.73□□□□□ -0.21
INO80E-203ENST00000540562 EMX1Q04741 257 aaPredicted RBP13.73□□□□□ -0.21
INO80E-203ENST00000540562 VEPH1Q14D04 833 aa13.73□□□□□ -0.21
INO80E-203ENST00000540562 HKDC1Q2TB90 917 aa13.73□□□□□ -0.21
INO80E-203ENST00000540562 GPRC6AQ5T6X5 926 aa13.73□□□□□ -0.21
INO80E-203ENST00000540562 DCP2Q8IU60 420 aaKnown RBP13.73□□□□□ -0.21
INO80E-203ENST00000540562 OR4K1Q8NGD4 311 aa13.73□□□□□ -0.21
INO80E-203ENST00000540562 HIST1H2AHQ96KK5 128 aa13.73□□□□□ -0.21
INO80E-203ENST00000540562 KCNC2Q96PR1 638 aa13.73□□□□□ -0.21
INO80E-203ENST00000540562 HIST1H2AJQ99878 128 aa13.73□□□□□ -0.21
INO80E-203ENST00000540562 H2AFJQ9BTM1 129 aa13.73□□□□□ -0.21
INO80E-203ENST00000540562 INTS6Q9UL03 887 aaKnown RBP13.73□□□□□ -0.21
INO80E-203ENST00000540562 CCL26Q9Y258 94 aa13.73□□□□□ -0.21
INO80E-203ENST00000540562 TESMINQ9Y4I5 508 aa13.73□□□□□ -0.21
INO80E-203ENST00000540562 M0R3G1 203 aa13.73□□□□□ -0.21
INO80E-203ENST00000540562 FPGTO14772 594 aa13.73□□□□□ -0.21
INO80E-203ENST00000540562 YY2O15391 372 aa13.73□□□□□ -0.21
INO80E-203ENST00000540562 NADKO95544 446 aaPredicted RBP13.73□□□□□ -0.21
INO80E-203ENST00000540562 KRT6AP02538 564 aa13.73□□□□□ -0.21
INO80E-203ENST00000540562 KRT6BP04259 564 aa13.73□□□□□ -0.21
INO80E-203ENST00000540562 HSMCR30P0CW71 290 aa13.73□□□□□ -0.21
INO80E-203ENST00000540562 PPP3CCP48454 512 aa13.73□□□□□ -0.21
INO80E-203ENST00000540562 KRT6CP48668 564 aa13.73□□□□□ -0.21
INO80E-203ENST00000540562 PPP2R2BQ00005 443 aa13.73□□□□□ -0.21
INO80E-203ENST00000540562 SP3Q02447 781 aa13.73□□□□□ -0.21
INO80E-203ENST00000540562 MVKQ03426 396 aa13.73□□□□□ -0.21
INO80E-203ENST00000540562 TP53BP2Q13625 1128 aa13.73□□□□□ -0.21
INO80E-203ENST00000540562 USP39Q53GS9 565 aaKnown RBP13.73□□□□□ -0.21
INO80E-203ENST00000540562 RUNDC3AQ59EK9 446 aa13.73□□□□□ -0.21
INO80E-203ENST00000540562 XKR6Q5GH73 641 aa13.73□□□□□ -0.21
INO80E-203ENST00000540562 TTC23Q5W5X9 447 aa13.73□□□□□ -0.21
INO80E-203ENST00000540562 PAPD5Q8NDF8 572 aaKnown RBP13.73□□□□□ -0.21
INO80E-203ENST00000540562 CYB5D2Q8WUJ1 264 aa13.73□□□□□ -0.21
INO80E-203ENST00000540562 FATE1Q969F0 183 aa13.73□□□□□ -0.21
INO80E-203ENST00000540562 REXO5Q96IC2 774 aaKnown RBP13.73□□□□□ -0.21
INO80E-203ENST00000540562 C1QTNF3Q9BXJ4 246 aa13.73□□□□□ -0.21
INO80E-203ENST00000540562 WDR70Q9NW82 654 aa13.73□□□□□ -0.21
INO80E-203ENST00000540562 TUBA8Q9NY65 449 aaPredicted RBP13.73□□□□□ -0.21
INO80E-203ENST00000540562 PSME2Q9UL46 239 aa13.73□□□□□ -0.21
INO80E-203ENST00000540562 GMPPBQ9Y5P6 360 aa13.73□□□□□ -0.21
INO80E-203ENST00000540562 INHAP05111 366 aa13.72□□□□□ -0.21
INO80E-203ENST00000540562 MSH3P20585 1137 aa13.72□□□□□ -0.21
INO80E-203ENST00000540562 SPAM1P38567 509 aa13.72□□□□□ -0.21
INO80E-203ENST00000540562 SEPHS1P49903 392 aa13.72□□□□□ -0.21
INO80E-203ENST00000540562 TRIM16LQ309B1 348 aa13.72□□□□□ -0.21
INO80E-203ENST00000540562 RETSATQ6NUM9 610 aa13.72□□□□□ -0.21
INO80E-203ENST00000540562 DPY19L3Q6ZPD9 716 aa13.72□□□□□ -0.21
INO80E-203ENST00000540562 DCDC5Q6ZRR9 648 aa13.72□□□□□ -0.21
INO80E-203ENST00000540562 HMGN2P46Q86SG4 172 aa13.72□□□□□ -0.21
INO80E-203ENST00000540562 TMEM150AQ86TG1 271 aa13.72□□□□□ -0.21
INO80E-203ENST00000540562 ADHFE1Q8IWW8 467 aa13.72□□□□□ -0.21
INO80E-203ENST00000540562 NLGN4XQ8N0W4 816 aa13.72□□□□□ -0.21
INO80E-203ENST00000540562 ZNF461Q8TAF7 563 aa13.72□□□□□ -0.21
INO80E-203ENST00000540562 SPPL2AQ8TCT8 520 aa13.72□□□□□ -0.21
INO80E-203ENST00000540562 BORCS5Q969J3 196 aa13.72□□□□□ -0.21
INO80E-203ENST00000540562 RBM4BQ9BQ04 359 aaKnown RBP13.72□□□□□ -0.21
INO80E-203ENST00000540562 C2orf49Q9BVC5 232 aaPredicted RBP13.72□□□□□ -0.21
INO80E-203ENST00000540562 RBM4Q9BWF3 364 aaKnown RBP13.72□□□□□ -0.21
INO80E-203ENST00000540562 RERGLQ9H628 205 aa13.72□□□□□ -0.21
INO80E-203ENST00000540562 CLMPQ9H6B4 373 aa13.72□□□□□ -0.21
INO80E-203ENST00000540562 RNF167Q9H6Y7 350 aa13.72□□□□□ -0.21
INO80E-203ENST00000540562 C3orf18Q9UK00 162 aa13.72□□□□□ -0.21
INO80E-203ENST00000540562 SH3BP1Q9Y3L3 701 aa13.72□□□□□ -0.21
INO80E-203ENST00000540562 LOC100506127A0A0U1RQW1 187 aa13.72□□□□□ -0.21
INO80E-203ENST00000540562 FAM20BO75063 409 aa13.72□□□□□ -0.21
INO80E-203ENST00000540562 LAMP1P11279 417 aa13.72□□□□□ -0.21
INO80E-203ENST00000540562 BDKRB1P46663 353 aa13.72□□□□□ -0.21
INO80E-203ENST00000540562 IRF8Q02556 426 aa13.72□□□□□ -0.21
INO80E-203ENST00000540562 NPTX1Q15818 432 aa13.72□□□□□ -0.21
INO80E-203ENST00000540562 ACBD5Q5T8D3 534 aaPredicted RBP13.72□□□□□ -0.21
INO80E-203ENST00000540562 Q6ZVL8 140 aa13.72□□□□□ -0.21
INO80E-203ENST00000540562 C11orf74Q86VG3 221 aa13.72□□□□□ -0.21
INO80E-203ENST00000540562 TMEM132CQ8N3T6 1108 aa13.72□□□□□ -0.21
INO80E-203ENST00000540562 PROX1Q92786 737 aa13.72□□□□□ -0.21
INO80E-203ENST00000540562 TMEM169Q96HH4 297 aa13.72□□□□□ -0.21
INO80E-203ENST00000540562 ACAT2Q9BWD1 397 aa13.72□□□□□ -0.21
INO80E-203ENST00000540562 SERHLQ9NQF3 203 aa13.72□□□□□ -0.21
INO80E-203ENST00000540562 AASDHPPTQ9NRN7 309 aa13.72□□□□□ -0.21
INO80E-203ENST00000540562 DCAF13Q9NV06 445 aaKnown RBP13.72□□□□□ -0.21
INO80E-203ENST00000540562 SIRT5Q9NXA8 310 aa13.72□□□□□ -0.21
INO80E-203ENST00000540562 RHCGQ9UBD6 479 aa13.72□□□□□ -0.21
INO80E-203ENST00000540562 TMEFF2Q9UIK5 374 aaPredicted RBP13.72□□□□□ -0.21
INO80E-203ENST00000540562 PCDHB1Q9Y5F3 818 aa13.72□□□□□ -0.21
INO80E-203ENST00000540562 GNG14A0A1W2PPG7 69 aa13.72□□□□□ -0.21
INO80E-203ENST00000540562 CLIC1O00299 241 aa13.72□□□□□ -0.21
INO80E-203ENST00000540562 NDUFS2O75306 463 aa13.72□□□□□ -0.21
INO80E-203ENST00000540562 RECQL5O94762 991 aaPredicted RBP13.72□□□□□ -0.21
INO80E-203ENST00000540562 MT-ND2P03891 347 aa13.72□□□□□ -0.21
INO80E-203ENST00000540562 TPP2P29144 1249 aaPredicted RBP13.72□□□□□ -0.21
INO80E-203ENST00000540562 DAPP51397 102 aa13.72□□□□□ -0.21
INO80E-203ENST00000540562 ISL1P61371 349 aa13.72□□□□□ -0.21
INO80E-203ENST00000540562 CDK5R2Q13319 367 aa13.72□□□□□ -0.21
INO80E-203ENST00000540562 ZNF829Q3KNS6 432 aaPredicted RBP13.72□□□□□ -0.21
INO80E-203ENST00000540562 FAM26DQ5JW98 314 aa13.72□□□□□ -0.21
INO80E-203ENST00000540562 OR8J3Q8NGG0 315 aa13.72□□□□□ -0.21
INO80E-203ENST00000540562 ADAMTS19Q8TE59 1207 aa13.72□□□□□ -0.21
INO80E-203ENST00000540562 MAGEE1Q9HCI5 957 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms