RNA–Protein interactions for RNA: ENST00000539320.2

SCARB1-206, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 720 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-206ENST00000539320 MATN4O95460 622 aa21.28■■□□□ 1
SCARB1-206ENST00000539320 IGHEP01854 428 aa21.28■■□□□ 1
SCARB1-206ENST00000539320 UMODP07911 640 aa21.28■■□□□ 1
SCARB1-206ENST00000539320 ITGAXP20702 1163 aa21.28■■□□□ 1
SCARB1-206ENST00000539320 FOXL2P58012 376 aa21.28■■□□□ 1
SCARB1-206ENST00000539320 THOC5Q13769 683 aaKnown RBP21.28■■□□□ 1
SCARB1-206ENST00000539320 ACSBG2Q5FVE4 666 aa21.28■■□□□ 1
SCARB1-206ENST00000539320 EEF1AKMT2Q5JPI9 291 aaKnown RBP21.28■■□□□ 1
SCARB1-206ENST00000539320 VWA5B1Q5TIE3 1220 aa21.28■■□□□ 1
SCARB1-206ENST00000539320 PPP1R32Q7Z5V6 425 aa21.28■■□□□ 1
SCARB1-206ENST00000539320 EFCAB3Q8N7B9 438 aa21.28■■□□□ 1
SCARB1-206ENST00000539320 PTERQ96BW5 349 aa21.28■■□□□ 1
SCARB1-206ENST00000539320 SMAD5Q99717 465 aaKnown RBP21.28■■□□□ 1
SCARB1-206ENST00000539320 ENAMQ9NRM1 1142 aa21.28■■□□□ 1
SCARB1-206ENST00000539320 NEU2Q9Y3R4 380 aa21.28■■□□□ 1
SCARB1-206ENST00000539320 MAGEB16A2A368 324 aa21.27■■□□□ 1
SCARB1-206ENST00000539320 CTAGE9A4FU28 777 aa21.27■■□□□ 1
SCARB1-206ENST00000539320 PHF2O75151 1096 aa21.27■■□□□ 1
SCARB1-206ENST00000539320 USP1O94782 785 aa21.27■■□□□ 1
SCARB1-206ENST00000539320 ERGP11308 486 aa21.27■■□□□ 1
SCARB1-206ENST00000539320 PIM1P11309 404 aaPredicted RBP21.27■■□□□ 1
SCARB1-206ENST00000539320 MAGEA3P43357 314 aa21.27■■□□□ 1
SCARB1-206ENST00000539320 RAPSNQ13702 412 aa21.27■■□□□ 1
SCARB1-206ENST00000539320 NAA25Q14CX7 972 aa21.27■■□□□ 1
SCARB1-206ENST00000539320 KLHL38Q2WGJ6 581 aa21.27■■□□□ 1
SCARB1-206ENST00000539320 TTLL9Q3SXZ7 439 aa21.27■■□□□ 1
SCARB1-206ENST00000539320 DCAF10Q5QP82 559 aa21.27■■□□□ 1
SCARB1-206ENST00000539320 RNF44Q7L0R7 432 aa21.27■■□□□ 1
SCARB1-206ENST00000539320 CLEC1AQ8NC01 280 aa21.27■■□□□ 1
SCARB1-206ENST00000539320 OR2A1Q8NGT9 310 aa21.27■■□□□ 1
SCARB1-206ENST00000539320 OR9A1PQ8NGU1 263 aa21.27■■□□□ 1
SCARB1-206ENST00000539320 CPT1CQ8TCG5 803 aa21.27■■□□□ 1
SCARB1-206ENST00000539320 FAM114A2Q9NRY5 505 aa21.27■■□□□ 1
SCARB1-206ENST00000539320 P4HTMQ9NXG6 502 aa21.27■■□□□ 1
SCARB1-206ENST00000539320 GALPQ9UBC7 116 aa21.27■■□□□ 1
SCARB1-206ENST00000539320 PCM1Q15154 2024 aa21.27■■□□□ 1
SCARB1-206ENST00000539320 SPTAN1Q13813 2472 aaKnown RBP21.27■□□□□ 0.99
SCARB1-206ENST00000539320 GOLGA6L10A0A0M3HER8 536 aa21.26■□□□□ 0.99
SCARB1-206ENST00000539320 ZCWPW2A0A1B0GU75 182 aa21.26■□□□□ 0.99
SCARB1-206ENST00000539320 FITM1A5D6W6 292 aa21.26■□□□□ 0.99
SCARB1-206ENST00000539320 MYO1CO00159 1063 aa21.26■□□□□ 0.99
SCARB1-206ENST00000539320 PSIP1O75475 530 aaKnown RBP21.26■□□□□ 0.99
SCARB1-206ENST00000539320 ONECUT2O95948 504 aa21.26■□□□□ 0.99
SCARB1-206ENST00000539320 CATP04040 527 aaKnown RBP21.26■□□□□ 0.99
SCARB1-206ENST00000539320 F7P08709 466 aaPredicted RBP21.26■□□□□ 0.99
SCARB1-206ENST00000539320 FNTAP49354 379 aa21.26■□□□□ 0.99
SCARB1-206ENST00000539320 VSX2P58304 361 aaPredicted RBP21.26■□□□□ 0.99
SCARB1-206ENST00000539320 UBAP2LQ14157 1087 aaKnown RBP21.26■□□□□ 0.99
SCARB1-206ENST00000539320 FASTKQ14296 549 aaKnown RBP21.26■□□□□ 0.99
SCARB1-206ENST00000539320 COX15Q7KZN9 410 aa21.26■□□□□ 0.99
SCARB1-206ENST00000539320 DENND6AQ8IWF6 608 aa21.26■□□□□ 0.99
SCARB1-206ENST00000539320 SLC35F6Q8N357 371 aa21.26■□□□□ 0.99
SCARB1-206ENST00000539320 GRK7Q8WTQ7 553 aa21.26■□□□□ 0.99
SCARB1-206ENST00000539320 COG1Q8WTW3 980 aa21.26■□□□□ 0.99
SCARB1-206ENST00000539320 CCDC68Q9H2F9 335 aa21.26■□□□□ 0.99
SCARB1-206ENST00000539320 FBXO6Q9NRD1 293 aaPredicted RBP21.26■□□□□ 0.99
SCARB1-206ENST00000539320 A0A0J9YVX5 310 aa21.25■□□□□ 0.99
SCARB1-206ENST00000539320 CLEC18AA5D8T8 446 aa21.25■□□□□ 0.99
SCARB1-206ENST00000539320 KIF5CO60282 957 aa21.25■□□□□ 0.99
SCARB1-206ENST00000539320 NRP2O60462 931 aa21.25■□□□□ 0.99
SCARB1-206ENST00000539320 SRPX2O60687 465 aaPredicted RBP21.25■□□□□ 0.99
SCARB1-206ENST00000539320 ALBP02768 609 aa21.25■□□□□ 0.99
SCARB1-206ENST00000539320 CMPK1P30085 196 aa21.25■□□□□ 0.99
SCARB1-206ENST00000539320 SLC1A2P43004 574 aa21.25■□□□□ 0.99
SCARB1-206ENST00000539320 CLCN7P51798 805 aa21.25■□□□□ 0.99
SCARB1-206ENST00000539320 SLC6A19Q695T7 634 aa21.25■□□□□ 0.99
SCARB1-206ENST00000539320 CLEC18BQ6UXF7 455 aa21.25■□□□□ 0.99
SCARB1-206ENST00000539320 NEK10Q6ZWH5 1172 aa21.25■□□□□ 0.99
SCARB1-206ENST00000539320 OVCH1Q7RTY7 1134 aa21.25■□□□□ 0.99
SCARB1-206ENST00000539320 TMEM151BQ8IW70 566 aa21.25■□□□□ 0.99
SCARB1-206ENST00000539320 NAT8LQ8N9F0 302 aa21.25■□□□□ 0.99
SCARB1-206ENST00000539320 CLEC18CQ8NCF0 446 aa21.25■□□□□ 0.99
SCARB1-206ENST00000539320 GIMAP7Q8NHV1 300 aa21.25■□□□□ 0.99
SCARB1-206ENST00000539320 ACTRT1Q8TDG2 376 aa21.25■□□□□ 0.99
SCARB1-206ENST00000539320 SMPDL3AQ92484 453 aa21.25■□□□□ 0.99
SCARB1-206ENST00000539320 OSBPL9Q96SU4 736 aa21.25■□□□□ 0.99
SCARB1-206ENST00000539320 SLC30A3Q99726 388 aa21.25■□□□□ 0.99
SCARB1-206ENST00000539320 ACAT2Q9BWD1 397 aa21.25■□□□□ 0.99
SCARB1-206ENST00000539320 SLC26A1Q9H2B4 701 aa21.25■□□□□ 0.99
SCARB1-206ENST00000539320 WDR54Q9H977 334 aa21.25■□□□□ 0.99
SCARB1-206ENST00000539320 C5AR2Q9P296 337 aa21.25■□□□□ 0.99
SCARB1-206ENST00000539320 SHANK1Q9Y566 2161 aa21.25■□□□□ 0.99
SCARB1-206ENST00000539320 MAD1L1Q9Y6D9 718 aa21.25■□□□□ 0.99
SCARB1-206ENST00000539320 USP9XQ93008 2570 aaPredicted RBP21.25■□□□□ 0.99
SCARB1-206ENST00000539320 SPTBN1Q01082 2364 aaKnown RBP21.24■□□□□ 0.99
SCARB1-206ENST00000539320 OR2A25A4D2G3 310 aa21.24■□□□□ 0.99
SCARB1-206ENST00000539320 KLHL41O60662 606 aa21.24■□□□□ 0.99
SCARB1-206ENST00000539320 CTBP1Q13363 440 aa21.24■□□□□ 0.99
SCARB1-206ENST00000539320 MYBPC3Q14896 1274 aa21.24■□□□□ 0.99
SCARB1-206ENST00000539320 ARHGAP19Q14CB8 494 aa21.24■□□□□ 0.99
SCARB1-206ENST00000539320 LONRF1Q17RB8 773 aa21.24■□□□□ 0.99
SCARB1-206ENST00000539320 FAM214AQ32MH5 1076 aa21.24■□□□□ 0.99
SCARB1-206ENST00000539320 WASHC2DQ5SRD0 308 aa21.24■□□□□ 0.99
SCARB1-206ENST00000539320 FRMPD2BQ6IN97 320 aa21.24■□□□□ 0.99
SCARB1-206ENST00000539320 JMJD6Q6NYC1 403 aaPredicted RBP21.24■□□□□ 0.99
SCARB1-206ENST00000539320 REXO1L1PQ8IX06 675 aa21.24■□□□□ 0.99
SCARB1-206ENST00000539320 LMNTD2Q8IXW0 634 aa21.24■□□□□ 0.99
SCARB1-206ENST00000539320 AGGF1Q8N302 714 aaeCLIP21.24■□□□□ 0.997e-7■■■■■ 27.5
SCARB1-206ENST00000539320 GALNT16Q8N428 558 aa21.24■□□□□ 0.99
SCARB1-206ENST00000539320 METTL27Q8N6F8 245 aaPredicted RBP21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms