RNA–Protein interactions for RNA: ENST00000538828.1

CLTCL1-205, Transcript of clathrin heavy chain like 1, humanhuman

TSL 5

Gene CLTCL1, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-205ENST00000538828 SYT10Q6XYQ8 523 aa11.83□□□□□ -0.52
CLTCL1-205ENST00000538828 SYTL1Q8IYJ3 562 aa11.83□□□□□ -0.52
CLTCL1-205ENST00000538828 UNC5BQ8IZJ1 945 aa11.83□□□□□ -0.52
CLTCL1-205ENST00000538828 SLC38A9Q8NBW4 561 aa11.83□□□□□ -0.52
CLTCL1-205ENST00000538828 FAM45AQ8TCE6 357 aa11.83□□□□□ -0.52
CLTCL1-205ENST00000538828 MCOLN3Q8TDD5 553 aa11.83□□□□□ -0.52
CLTCL1-205ENST00000538828 EXTL1Q92935 676 aa11.83□□□□□ -0.52
CLTCL1-205ENST00000538828 CLIP3Q96DZ5 547 aa11.83□□□□□ -0.52
CLTCL1-205ENST00000538828 IP6K3Q96PC2 410 aa11.83□□□□□ -0.52
CLTCL1-205ENST00000538828 IL17FQ96PD4 163 aa11.83□□□□□ -0.52
CLTCL1-205ENST00000538828 SLC30A3Q99726 388 aa11.83□□□□□ -0.52
CLTCL1-205ENST00000538828 WDR83Q9BRX9 315 aaKnown RBP11.83□□□□□ -0.52
CLTCL1-205ENST00000538828 FAM129AQ9BZQ8 928 aa11.83□□□□□ -0.52
CLTCL1-205ENST00000538828 PCBD2Q9H0N5 130 aa11.83□□□□□ -0.52
CLTCL1-205ENST00000538828 STARD5Q9NSY2 213 aa11.83□□□□□ -0.52
CLTCL1-205ENST00000538828 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.83□□□□□ -0.52
CLTCL1-205ENST00000538828 CDC23Q9UJX2 597 aa11.83□□□□□ -0.52
CLTCL1-205ENST00000538828 CHMP2BQ9UQN3 213 aa11.83□□□□□ -0.52
CLTCL1-205ENST00000538828 PADI2Q9Y2J8 665 aa11.83□□□□□ -0.52
CLTCL1-205ENST00000538828 FER1L5A0AVI2 2057 aa11.83□□□□□ -0.52
CLTCL1-205ENST00000538828 HELZ2Q9BYK8 2649 aaKnown RBP11.83□□□□□ -0.52
CLTCL1-205ENST00000538828 E7ENX8 843 aa11.82□□□□□ -0.52
CLTCL1-205ENST00000538828 RAD51CO43502 376 aa11.82□□□□□ -0.52
CLTCL1-205ENST00000538828 C1QL1O75973 258 aa11.82□□□□□ -0.52
CLTCL1-205ENST00000538828 ALBP02768 609 aa11.82□□□□□ -0.52
CLTCL1-205ENST00000538828 CAPN1P07384 714 aa11.82□□□□□ -0.52
CLTCL1-205ENST00000538828 PIM1P11309 404 aaPredicted RBP11.82□□□□□ -0.52
CLTCL1-205ENST00000538828 CCND1P24385 295 aa11.82□□□□□ -0.52
CLTCL1-205ENST00000538828 BDKRB1P46663 353 aa11.82□□□□□ -0.52
CLTCL1-205ENST00000538828 CARSP49589 748 aaKnown RBP11.82□□□□□ -0.52
CLTCL1-205ENST00000538828 PNLIPRP1P54315 467 aa11.82□□□□□ -0.52
CLTCL1-205ENST00000538828 TAP2Q03519 686 aa11.82□□□□□ -0.52
CLTCL1-205ENST00000538828 PDIA2Q13087 525 aaKnown RBP11.82□□□□□ -0.52
CLTCL1-205ENST00000538828 GRM7Q14831 915 aa11.82□□□□□ -0.52
CLTCL1-205ENST00000538828 FAM214AQ32MH5 1076 aa11.82□□□□□ -0.52
CLTCL1-205ENST00000538828 CCSMST1Q4G0I0 132 aa11.82□□□□□ -0.52
CLTCL1-205ENST00000538828 FCRL6Q6DN72 434 aa11.82□□□□□ -0.52
CLTCL1-205ENST00000538828 RNF44Q7L0R7 432 aa11.82□□□□□ -0.52
CLTCL1-205ENST00000538828 TRIM73Q86UV7 250 aa11.82□□□□□ -0.52
CLTCL1-205ENST00000538828 MCATQ8IVS2 390 aaKnown RBP11.82□□□□□ -0.52
CLTCL1-205ENST00000538828 LRRC56Q8IYG6 542 aaPredicted RBP11.82□□□□□ -0.52
CLTCL1-205ENST00000538828 ZNF843Q8N446 348 aa11.82□□□□□ -0.52
CLTCL1-205ENST00000538828 EXD3Q8N9H8 876 aa11.82□□□□□ -0.52
CLTCL1-205ENST00000538828 FBXO36Q8NEA4 188 aa11.82□□□□□ -0.52
CLTCL1-205ENST00000538828 ZNF480Q8WV37 535 aa11.82□□□□□ -0.52
CLTCL1-205ENST00000538828 MR1Q95460 341 aa11.82□□□□□ -0.52
CLTCL1-205ENST00000538828 CCDC138Q96M89 665 aa11.82□□□□□ -0.52
CLTCL1-205ENST00000538828 GBP5Q96PP8 586 aa11.82□□□□□ -0.52
CLTCL1-205ENST00000538828 NDC1Q9BTX1 674 aa11.82□□□□□ -0.52
CLTCL1-205ENST00000538828 SLC7A5P2Q9GIP4 190 aa11.82□□□□□ -0.52
CLTCL1-205ENST00000538828 CHST8Q9H2A9 424 aa11.82□□□□□ -0.52
CLTCL1-205ENST00000538828 ACTL8Q9H568 366 aa11.82□□□□□ -0.52
CLTCL1-205ENST00000538828 PARVBQ9HBI1 364 aa11.82□□□□□ -0.52
CLTCL1-205ENST00000538828 POPDC3Q9HBV1 291 aa11.82□□□□□ -0.52
CLTCL1-205ENST00000538828 ZFATQ9P243 1243 aa11.82□□□□□ -0.52
CLTCL1-205ENST00000538828 VWA7Q9Y334 891 aa11.82□□□□□ -0.52
CLTCL1-205ENST00000538828 SNX24Q9Y343 169 aa11.82□□□□□ -0.52
CLTCL1-205ENST00000538828 KCNMB2Q9Y691 235 aa11.82□□□□□ -0.52
CLTCL1-205ENST00000538828 C9J4A7 227 aa11.81□□□□□ -0.52
CLTCL1-205ENST00000538828 TXNDC9O14530 226 aa11.81□□□□□ -0.52
CLTCL1-205ENST00000538828 KATNA1O75449 491 aa11.81□□□□□ -0.52
CLTCL1-205ENST00000538828 BANF1O75531 89 aa11.81□□□□□ -0.52
CLTCL1-205ENST00000538828 SLC16A8O95907 504 aa11.81□□□□□ -0.52
CLTCL1-205ENST00000538828 IGHEP01854 428 aa11.81□□□□□ -0.52
CLTCL1-205ENST00000538828 ENO2P09104 434 aaPredicted RBP11.81□□□□□ -0.52
CLTCL1-205ENST00000538828 FDXRP22570 491 aa11.81□□□□□ -0.52
CLTCL1-205ENST00000538828 POLE2P56282 527 aa11.81□□□□□ -0.52
CLTCL1-205ENST00000538828 AP1S2P56377 157 aa11.81□□□□□ -0.52
CLTCL1-205ENST00000538828 IL2P60568 153 aa11.81□□□□□ -0.52
CLTCL1-205ENST00000538828 DCDP81605 110 aaKnown RBP11.81□□□□□ -0.52
CLTCL1-205ENST00000538828 NCF4Q15080 339 aa11.81□□□□□ -0.52
CLTCL1-205ENST00000538828 WHAMMP3Q1A5X7 153 aa11.81□□□□□ -0.52
CLTCL1-205ENST00000538828 ZNF425Q6IV72 752 aa11.81□□□□□ -0.52
CLTCL1-205ENST00000538828 TRMT10BQ6PF06 316 aaKnown RBP11.81□□□□□ -0.52
CLTCL1-205ENST00000538828 FAM198BQ6UWH4 519 aa11.81□□□□□ -0.52
CLTCL1-205ENST00000538828 PALM2Q8IXS6 379 aa11.81□□□□□ -0.52
CLTCL1-205ENST00000538828 CPNE9Q8IYJ1 553 aa11.81□□□□□ -0.52
CLTCL1-205ENST00000538828 MYO1HQ8N1T3 1032 aa11.81□□□□□ -0.52
CLTCL1-205ENST00000538828 ADAMTS17Q8TE56 1095 aa11.81□□□□□ -0.52
CLTCL1-205ENST00000538828 PYROXD1Q8WU10 500 aa11.81□□□□□ -0.52
CLTCL1-205ENST00000538828 FKBP10Q96AY3 582 aa11.81□□□□□ -0.52
CLTCL1-205ENST00000538828 MVB12AQ96EY5 273 aa11.81□□□□□ -0.52
CLTCL1-205ENST00000538828 PKP4Q99569 1192 aa11.81□□□□□ -0.52
CLTCL1-205ENST00000538828 PLCD4Q9BRC7 762 aa11.81□□□□□ -0.52
CLTCL1-205ENST00000538828 MCMBPQ9BTE3 642 aa11.81□□□□□ -0.52
CLTCL1-205ENST00000538828 TRIM31Q9BZY9 425 aa11.81□□□□□ -0.52
CLTCL1-205ENST00000538828 KLHL25Q9H0H3 589 aa11.81□□□□□ -0.52
CLTCL1-205ENST00000538828 SLC25A18Q9H1K4 315 aa11.81□□□□□ -0.52
CLTCL1-205ENST00000538828 SLC26A1Q9H2B4 701 aa11.81□□□□□ -0.52
CLTCL1-205ENST00000538828 AKIRIN1Q9H9L7 192 aaPredicted RBP11.81□□□□□ -0.52
CLTCL1-205ENST00000538828 PPANQ9NQ55 473 aaKnown RBP11.81□□□□□ -0.52
CLTCL1-205ENST00000538828 TXLNGQ9NUQ3 528 aa11.81□□□□□ -0.52
CLTCL1-205ENST00000538828 GRHL1Q9NZI5 618 aa11.81□□□□□ -0.52
CLTCL1-205ENST00000538828 TCFL5Q9UL49 500 aa11.81□□□□□ -0.52
CLTCL1-205ENST00000538828 SNX7Q9UNH6 387 aa11.81□□□□□ -0.52
CLTCL1-205ENST00000538828 NOVA2Q9UNW9 492 aaKnown RBP11.81□□□□□ -0.52
CLTCL1-205ENST00000538828 BOD1L1Q8NFC6 3051 aa11.8□□□□□ -0.52
CLTCL1-205ENST00000538828 MDC1Q14676 2089 aaKnown RBP11.8□□□□□ -0.52
CLTCL1-205ENST00000538828 A0A1B0GX78 115 aa11.8□□□□□ -0.52
CLTCL1-205ENST00000538828 B8ZZF3 427 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms