RNA–Protein interactions for RNA: ENST00000538235.2

CHFR-216, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 687 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-216ENST00000538235 KIR2DS3Q14952 304 aa12.6□□□□□ -0.39
CHFR-216ENST00000538235 TECRLQ5HYJ1 363 aa12.6□□□□□ -0.39
CHFR-216ENST00000538235 LRRC8EQ6NSJ5 796 aa12.6□□□□□ -0.39
CHFR-216ENST00000538235 EMBQ6PCB8 327 aa12.6□□□□□ -0.39
CHFR-216ENST00000538235 AGTRAPQ6RW13 159 aa12.6□□□□□ -0.39
CHFR-216ENST00000538235 IGF2-ASQ6U949 168 aa12.6□□□□□ -0.39
CHFR-216ENST00000538235 FAM129CQ86XR2 697 aa12.6□□□□□ -0.39
CHFR-216ENST00000538235 TMEM151BQ8IW70 566 aa12.6□□□□□ -0.39
CHFR-216ENST00000538235 TMEM151AQ8N4L1 468 aa12.6□□□□□ -0.39
CHFR-216ENST00000538235 DTWD1Q8N5C7 304 aa12.6□□□□□ -0.39
CHFR-216ENST00000538235 AGBL5Q8NDL9 886 aa12.6□□□□□ -0.39
CHFR-216ENST00000538235 OR56A3Q8NH54 315 aa12.6□□□□□ -0.39
CHFR-216ENST00000538235 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.6□□□□□ -0.39
CHFR-216ENST00000538235 USP7Q93009 1102 aa12.6□□□□□ -0.39
CHFR-216ENST00000538235 EXT2Q93063 718 aa12.6□□□□□ -0.39
CHFR-216ENST00000538235 ZNF501Q96CX3 271 aaPredicted RBP12.6□□□□□ -0.39
CHFR-216ENST00000538235 NXPE2Q96DL1 559 aa12.6□□□□□ -0.39
CHFR-216ENST00000538235 TSPAN17Q96FV3 270 aa12.6□□□□□ -0.39
CHFR-216ENST00000538235 ZDHHC12Q96GR4 267 aa12.6□□□□□ -0.39
CHFR-216ENST00000538235 CNTNAP3BQ96NU0 1288 aa12.6□□□□□ -0.39
CHFR-216ENST00000538235 CD180Q99467 661 aa12.6□□□□□ -0.39
CHFR-216ENST00000538235 SGPP1Q9BX95 441 aa12.6□□□□□ -0.39
CHFR-216ENST00000538235 CNTNAP3Q9BZ76 1288 aa12.6□□□□□ -0.39
CHFR-216ENST00000538235 SPRY4Q9C004 299 aa12.6□□□□□ -0.39
CHFR-216ENST00000538235 C1GALT1Q9NS00 363 aa12.6□□□□□ -0.39
CHFR-216ENST00000538235 ABCF3Q9NUQ8 709 aa12.6□□□□□ -0.39
CHFR-216ENST00000538235 INTS7Q9NVH2 962 aaKnown RBP12.6□□□□□ -0.39
CHFR-216ENST00000538235 TBK1Q9UHD2 729 aa12.6□□□□□ -0.39
CHFR-216ENST00000538235 NOVA2Q9UNW9 492 aaKnown RBP12.6□□□□□ -0.39
CHFR-216ENST00000538235 OARD1Q9Y530 152 aa12.6□□□□□ -0.39
CHFR-216ENST00000538235 ANKRD11Q6UB99 2663 aaPredicted RBP12.59□□□□□ -0.39
CHFR-216ENST00000538235 SCN3AQ9NY46 2000 aa12.59□□□□□ -0.39
CHFR-216ENST00000538235 NCF1BA6NI72 391 aaPredicted RBP12.59□□□□□ -0.39
CHFR-216ENST00000538235 NCF1CA8MVU1 366 aaPredicted RBP12.59□□□□□ -0.39
CHFR-216ENST00000538235 GOLGA8RI6L899 631 aa12.59□□□□□ -0.39
CHFR-216ENST00000538235 UBXN8O00124 270 aa12.59□□□□□ -0.39
CHFR-216ENST00000538235 TOX3O15405 576 aaPredicted RBP12.59□□□□□ -0.39
CHFR-216ENST00000538235 LTA4HP09960 611 aaKnown RBP12.59□□□□□ -0.39
CHFR-216ENST00000538235 NCF1P14598 390 aaPredicted RBP12.59□□□□□ -0.39
CHFR-216ENST00000538235 CYP2A7P20853 494 aa12.59□□□□□ -0.39
CHFR-216ENST00000538235 SLC5A2P31639 672 aa12.59□□□□□ -0.39
CHFR-216ENST00000538235 GDF5P43026 501 aa12.59□□□□□ -0.39
CHFR-216ENST00000538235 SLC6A12P48065 614 aa12.59□□□□□ -0.39
CHFR-216ENST00000538235 SERPINB9P50453 376 aa12.59□□□□□ -0.39
CHFR-216ENST00000538235 SLC12A2P55011 1212 aa12.59□□□□□ -0.39
CHFR-216ENST00000538235 MC2RQ01718 297 aa12.59□□□□□ -0.39
CHFR-216ENST00000538235 NAE1Q13564 534 aa12.59□□□□□ -0.39
CHFR-216ENST00000538235 TGFBIQ15582 683 aa12.59□□□□□ -0.39
CHFR-216ENST00000538235 ZNF425Q6IV72 752 aa12.59□□□□□ -0.39
CHFR-216ENST00000538235 KLHL35Q6PF15 583 aa12.59□□□□□ -0.39
CHFR-216ENST00000538235 RAPH1Q70E73 1250 aa12.59□□□□□ -0.39
CHFR-216ENST00000538235 TIPARPQ7Z3E1 657 aaKnown RBP12.59□□□□□ -0.39
CHFR-216ENST00000538235 PLD3Q8IV08 490 aa12.59□□□□□ -0.39
CHFR-216ENST00000538235 SYTL1Q8IYJ3 562 aa12.59□□□□□ -0.39
CHFR-216ENST00000538235 SHISA5Q8N114 240 aa12.59□□□□□ -0.39
CHFR-216ENST00000538235 DNAJC22Q8N4W6 341 aa12.59□□□□□ -0.39
CHFR-216ENST00000538235 OR1L3Q8NH93 324 aa12.59□□□□□ -0.39
CHFR-216ENST00000538235 KIAA1191Q96A73 305 aa12.59□□□□□ -0.39
CHFR-216ENST00000538235 RHBDF1Q96CC6 855 aa12.59□□□□□ -0.39
CHFR-216ENST00000538235 FBXL8Q96CD0 374 aa12.59□□□□□ -0.39
CHFR-216ENST00000538235 OR6C1Q96RD1 312 aa12.59□□□□□ -0.39
CHFR-216ENST00000538235 STRADBQ9C0K7 418 aa12.59□□□□□ -0.39
CHFR-216ENST00000538235 VPS11Q9H270 941 aa12.59□□□□□ -0.39
CHFR-216ENST00000538235 C12orf65Q9H3J6 166 aaKnown RBP12.59□□□□□ -0.39
CHFR-216ENST00000538235 SYTL2Q9HCH5 934 aa12.59□□□□□ -0.39
CHFR-216ENST00000538235 PCMTD2Q9NV79 361 aa12.59□□□□□ -0.39
CHFR-216ENST00000538235 PSMC3IPQ9P2W1 217 aaPredicted RBP12.59□□□□□ -0.39
CHFR-216ENST00000538235 FETUBQ9UGM5 382 aa12.59□□□□□ -0.39
CHFR-216ENST00000538235 EMCNQ9ULC0 261 aa12.59□□□□□ -0.39
CHFR-216ENST00000538235 OR2A25A4D2G3 310 aa12.58□□□□□ -0.4
CHFR-216ENST00000538235 B4E171 279 aa12.58□□□□□ -0.4
CHFR-216ENST00000538235 TK2O00142 265 aa12.58□□□□□ -0.4
CHFR-216ENST00000538235 MATN2O00339 956 aa12.58□□□□□ -0.4
CHFR-216ENST00000538235 CTIFO43310 598 aaKnown RBP12.58□□□□□ -0.4
CHFR-216ENST00000538235 ZBTB11O95625 1053 aaPredicted RBP12.58□□□□□ -0.4
CHFR-216ENST00000538235 CRABP2P29373 138 aa12.58□□□□□ -0.4
CHFR-216ENST00000538235 TYK2P29597 1187 aa12.58□□□□□ -0.4
CHFR-216ENST00000538235 CSTF2P33240 577 aaKnown RBP eCLIP12.58□□□□□ -0.4
CHFR-216ENST00000538235 TSPAN7P41732 249 aa12.58□□□□□ -0.4
CHFR-216ENST00000538235 GCGRP47871 477 aa12.58□□□□□ -0.4
CHFR-216ENST00000538235 AGTR2P50052 363 aa12.58□□□□□ -0.4
CHFR-216ENST00000538235 PRKAA1Q13131 559 aa12.58□□□□□ -0.4
CHFR-216ENST00000538235 EIF3IQ13347 325 aaKnown RBP12.58□□□□□ -0.4
CHFR-216ENST00000538235 TSTA3Q13630 321 aaPredicted RBP12.58□□□□□ -0.4
CHFR-216ENST00000538235 ARHGAP19Q14CB8 494 aa12.58□□□□□ -0.4
CHFR-216ENST00000538235 TGIF1Q15583 401 aa12.58□□□□□ -0.4
CHFR-216ENST00000538235 PTCHD3Q3KNS1 767 aa12.58□□□□□ -0.4
CHFR-216ENST00000538235 TBC1D25Q3MII6 688 aa12.58□□□□□ -0.4
CHFR-216ENST00000538235 ICE2Q659A1 982 aa12.58□□□□□ -0.4
CHFR-216ENST00000538235 FRMPD2BQ6IN97 320 aa12.58□□□□□ -0.4
CHFR-216ENST00000538235 ARMC6Q6NXE6 501 aa12.58□□□□□ -0.4
CHFR-216ENST00000538235 TIFABQ6ZNK6 161 aa12.58□□□□□ -0.4
CHFR-216ENST00000538235 ADAMTSL2Q86TH1 951 aa12.58□□□□□ -0.4
CHFR-216ENST00000538235 PAQR7Q86WK9 346 aa12.58□□□□□ -0.4
CHFR-216ENST00000538235 ZFAND4Q86XD8 727 aa12.58□□□□□ -0.4
CHFR-216ENST00000538235 TDRPQ86YL5 185 aa12.58□□□□□ -0.4
CHFR-216ENST00000538235 SLC38A9Q8NBW4 561 aa12.58□□□□□ -0.4
CHFR-216ENST00000538235 PDPRQ8NCN5 879 aa12.58□□□□□ -0.4
CHFR-216ENST00000538235 SMPDL3AQ92484 453 aa12.58□□□□□ -0.4
CHFR-216ENST00000538235 ANKRD7Q92527 254 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms