RNA–Protein interactions for RNA: ENST00000536274.5

MCF2-210, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-210ENST00000536274 NDUFB7P17568 137 aa3.63□□□□□ -1.83
MCF2-210ENST00000536274 EN2P19622 333 aaPredicted RBP3.63□□□□□ -1.83
MCF2-210ENST00000536274 ACSL1P33121 698 aa3.63□□□□□ -1.83
MCF2-210ENST00000536274 TRIM23P36406 574 aa3.63□□□□□ -1.83
MCF2-210ENST00000536274 PREPP48147 710 aa3.63□□□□□ -1.83
MCF2-210ENST00000536274 CXCR3P49682 368 aa3.63□□□□□ -1.83
MCF2-210ENST00000536274 ERVK-25P63136 954 aa3.63□□□□□ -1.83
MCF2-210ENST00000536274 ROR1Q01973 937 aa3.63□□□□□ -1.83
MCF2-210ENST00000536274 LRRC74AQ0VAA2 488 aa3.63□□□□□ -1.83
MCF2-210ENST00000536274 DAG1Q14118 895 aa3.63□□□□□ -1.83
MCF2-210ENST00000536274 LRRC32Q14392 662 aa3.63□□□□□ -1.83
MCF2-210ENST00000536274 INPP5AQ14642 412 aa3.63□□□□□ -1.83
MCF2-210ENST00000536274 ZNF169Q14929 603 aaPredicted RBP3.63□□□□□ -1.83
MCF2-210ENST00000536274 DUSP6Q16828 381 aa3.63□□□□□ -1.83
MCF2-210ENST00000536274 DDR2Q16832 855 aa3.63□□□□□ -1.83
MCF2-210ENST00000536274 SAMD4BQ5PRF9 694 aaKnown RBP3.63□□□□□ -1.83
MCF2-210ENST00000536274 FAM74A1Q5RGS3 127 aa3.63□□□□□ -1.83
MCF2-210ENST00000536274 KRT39Q6A163 491 aa3.63□□□□□ -1.83
MCF2-210ENST00000536274 TAF2Q6P1X5 1199 aa3.63□□□□□ -1.83
MCF2-210ENST00000536274 ENPP6Q6UWR7 440 aa3.63□□□□□ -1.83
MCF2-210ENST00000536274 RASSF6Q6ZTQ3 369 aa3.63□□□□□ -1.83
MCF2-210ENST00000536274 CREB3L2Q70SY1 520 aa3.63□□□□□ -1.83
MCF2-210ENST00000536274 PLEKHH3Q7Z736 793 aa3.63□□□□□ -1.83
MCF2-210ENST00000536274 LSRQ86X29 649 aaPredicted RBP3.63□□□□□ -1.83
MCF2-210ENST00000536274 RIOX2Q8IUF8 465 aa3.63□□□□□ -1.83
MCF2-210ENST00000536274 DCP1BQ8IZD4 617 aaKnown RBP3.63□□□□□ -1.83
MCF2-210ENST00000536274 TDHQ8IZJ6 230 aa3.63□□□□□ -1.83
MCF2-210ENST00000536274 TMEM199Q8N511 208 aa3.63□□□□□ -1.83
MCF2-210ENST00000536274 GPR156Q8NFN8 814 aa3.63□□□□□ -1.83
MCF2-210ENST00000536274 PNPT1Q8TCS8 783 aaKnown RBP3.63□□□□□ -1.83
MCF2-210ENST00000536274 UFD1Q92890 307 aa3.63□□□□□ -1.83
MCF2-210ENST00000536274 ZNF566Q969W8 418 aa3.63□□□□□ -1.83
MCF2-210ENST00000536274 MRPL48Q96GC5 212 aaKnown RBP3.63□□□□□ -1.83
MCF2-210ENST00000536274 FCRL3Q96P31 734 aaPredicted RBP3.63□□□□□ -1.83
MCF2-210ENST00000536274 MCCC1Q96RQ3 725 aaPredicted RBP3.63□□□□□ -1.83
MCF2-210ENST00000536274 DMRTA2Q96SC8 542 aa3.63□□□□□ -1.83
MCF2-210ENST00000536274 APOL2Q9BQE5 337 aa3.63□□□□□ -1.83
MCF2-210ENST00000536274 ERVK-6Q9BXR3 956 aa3.63□□□□□ -1.83
MCF2-210ENST00000536274 RBCK1Q9BYM8 510 aa3.63□□□□□ -1.83
MCF2-210ENST00000536274 BEX1Q9HBH7 125 aa3.63□□□□□ -1.83
MCF2-210ENST00000536274 ACOT13Q9NPJ3 140 aa3.63□□□□□ -1.83
MCF2-210ENST00000536274 NECTIN3Q9NQS3 549 aa3.63□□□□□ -1.83
MCF2-210ENST00000536274 DMAC2Q9NW81 257 aa3.63□□□□□ -1.83
MCF2-210ENST00000536274 SLC39A10Q9ULF5 831 aa3.63□□□□□ -1.83
MCF2-210ENST00000536274 PEX16Q9Y5Y5 336 aa3.63□□□□□ -1.83
MCF2-210ENST00000536274 EFCAB7A8K855 629 aa3.63□□□□□ -1.83
MCF2-210ENST00000536274 PRSS47A8MTI9 375 aa3.63□□□□□ -1.83
MCF2-210ENST00000536274 DNASE2O00115 360 aaPredicted RBP3.63□□□□□ -1.83
MCF2-210ENST00000536274 PCDH17O14917 1159 aa3.63□□□□□ -1.83
MCF2-210ENST00000536274 UBDO15205 165 aa3.63□□□□□ -1.83
MCF2-210ENST00000536274 SLC16A4O15374 487 aa3.63□□□□□ -1.83
MCF2-210ENST00000536274 AKAP8O43823 692 aaKnown RBP3.63□□□□□ -1.83
MCF2-210ENST00000536274 TBC1D4O60343 1298 aa3.63□□□□□ -1.83
MCF2-210ENST00000536274 CNTN5O94779 1100 aa3.63□□□□□ -1.83
MCF2-210ENST00000536274 SIX6O95475 246 aa3.63□□□□□ -1.83
MCF2-210ENST00000536274 CD63P08962 238 aa3.63□□□□□ -1.83
MCF2-210ENST00000536274 ACAA1P09110 424 aaPredicted RBP3.63□□□□□ -1.83
MCF2-210ENST00000536274 FGRP09769 529 aa3.63□□□□□ -1.83
MCF2-210ENST00000536274 ACADMP11310 421 aa3.63□□□□□ -1.83
MCF2-210ENST00000536274 HOXD8P13378 290 aaPredicted RBP3.63□□□□□ -1.83
MCF2-210ENST00000536274 KDELR1P24390 212 aa3.63□□□□□ -1.83
MCF2-210ENST00000536274 NUP62P37198 522 aaPredicted RBP3.63□□□□□ -1.83
MCF2-210ENST00000536274 PCP4P48539 62 aa3.63□□□□□ -1.83
MCF2-210ENST00000536274 CDK8P49336 464 aa3.63□□□□□ -1.83
MCF2-210ENST00000536274 GSK3BP49841 420 aa3.63□□□□□ -1.83
MCF2-210ENST00000536274 ZNF81P51508 661 aa3.63□□□□□ -1.83
MCF2-210ENST00000536274 DGKEP52429 567 aa3.63□□□□□ -1.83
MCF2-210ENST00000536274 GBX2P52951 348 aaPredicted RBP3.63□□□□□ -1.83
MCF2-210ENST00000536274 NOMO3P69849 1222 aa3.63□□□□□ -1.83
MCF2-210ENST00000536274 DEFA5Q01523 94 aa3.63□□□□□ -1.83
MCF2-210ENST00000536274 SOX4Q06945 474 aaPredicted RBP3.63□□□□□ -1.83
MCF2-210ENST00000536274 PTP4A2Q12974 167 aa3.63□□□□□ -1.83
MCF2-210ENST00000536274 TNK1Q13470 666 aa3.63□□□□□ -1.83
MCF2-210ENST00000536274 VEPH1Q14D04 833 aa3.63□□□□□ -1.83
MCF2-210ENST00000536274 ZNF284Q2VY69 593 aa3.63□□□□□ -1.83
MCF2-210ENST00000536274 RBM48Q5RL73 367 aaKnown RBP3.63□□□□□ -1.83
MCF2-210ENST00000536274 ZNF425Q6IV72 752 aa3.63□□□□□ -1.83
MCF2-210ENST00000536274 TIGD7Q6NT04 549 aaPredicted RBP3.63□□□□□ -1.83
MCF2-210ENST00000536274 LETMD1Q6P1Q0 360 aa3.63□□□□□ -1.83
MCF2-210ENST00000536274 FOXR2Q6PJQ5 311 aa3.63□□□□□ -1.83
MCF2-210ENST00000536274 C5orf46Q6UWT4 87 aa3.63□□□□□ -1.83
MCF2-210ENST00000536274 CIR1Q86X95 450 aaPredicted RBP3.63□□□□□ -1.83
MCF2-210ENST00000536274 PLCZ1Q86YW0 608 aa3.63□□□□□ -1.83
MCF2-210ENST00000536274 COLGALT2Q8IYK4 626 aa3.63□□□□□ -1.83
MCF2-210ENST00000536274 CNTD1Q8N815 330 aa3.63□□□□□ -1.83
MCF2-210ENST00000536274 SPPL2BQ8TCT7 592 aa3.63□□□□□ -1.83
MCF2-210ENST00000536274 ZNF431Q8TF32 576 aaPredicted RBP3.63□□□□□ -1.83
MCF2-210ENST00000536274 RXFP2Q8WXD0 754 aa3.63□□□□□ -1.83
MCF2-210ENST00000536274 ASB15Q8WXK1 588 aa3.63□□□□□ -1.83
MCF2-210ENST00000536274 EXOSC8Q96B26 276 aaKnown RBP3.63□□□□□ -1.83
MCF2-210ENST00000536274 PHF21BQ96EK2 531 aa3.63□□□□□ -1.83
MCF2-210ENST00000536274 AHCYL2Q96HN2 611 aaKnown RBP3.63□□□□□ -1.83
MCF2-210ENST00000536274 TEX37Q96LM6 180 aa3.63□□□□□ -1.83
MCF2-210ENST00000536274 FRMD6Q96NE9 622 aa3.63□□□□□ -1.83
MCF2-210ENST00000536274 RBP7Q96R05 134 aa3.63□□□□□ -1.83
MCF2-210ENST00000536274 TCF25Q9BQ70 676 aa3.63□□□□□ -1.83
MCF2-210ENST00000536274 C1QTNF1Q9BXJ1 281 aa3.63□□□□□ -1.83
MCF2-210ENST00000536274 MMP27Q9H306 513 aa3.63□□□□□ -1.83
MCF2-210ENST00000536274 R3HDMLQ9H3Y0 253 aa3.63□□□□□ -1.83
MCF2-210ENST00000536274 HEXA-AS1Q9H8Q6 139 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms