RNA–Protein interactions for RNA: ENST00000535871.1

CDCA3-205, Transcript of cell division cycle associated 3, humanhuman

TSL 5

Gene CDCA3, Length 454 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-205ENST00000535871 CLPPQ16740 277 aaPredicted RBP6.3□□□□□ -1.4
CDCA3-205ENST00000535871 PTCHD3Q3KNS1 767 aa6.3□□□□□ -1.4
CDCA3-205ENST00000535871 EEF1AKMT2Q5JPI9 291 aaKnown RBP6.3□□□□□ -1.4
CDCA3-205ENST00000535871 ZNF648Q5T619 568 aaPredicted RBP6.3□□□□□ -1.4
CDCA3-205ENST00000535871 GTF2H2CQ6P1K8 395 aa6.3□□□□□ -1.4
CDCA3-205ENST00000535871 KLHL35Q6PF15 583 aa6.3□□□□□ -1.4
CDCA3-205ENST00000535871 SLC23A3Q6PIS1 610 aa6.3□□□□□ -1.4
CDCA3-205ENST00000535871 DOK6Q6PKX4 331 aa6.3□□□□□ -1.4
CDCA3-205ENST00000535871 AGTRAPQ6RW13 159 aa6.3□□□□□ -1.4
CDCA3-205ENST00000535871 NAPRTQ6XQN6 538 aa6.3□□□□□ -1.4
CDCA3-205ENST00000535871 FAM83HQ6ZRV2 1179 aaPredicted RBP6.3□□□□□ -1.4
CDCA3-205ENST00000535871 GPRIN3Q6ZVF9 776 aa6.3□□□□□ -1.4
CDCA3-205ENST00000535871 SLC9B2Q86UD5 537 aa6.3□□□□□ -1.4
CDCA3-205ENST00000535871 CUZD1Q86UP6 607 aa6.3□□□□□ -1.4
CDCA3-205ENST00000535871 NRROSQ86YC3 692 aa6.3□□□□□ -1.4
CDCA3-205ENST00000535871 HID1Q8IV36 788 aa6.3□□□□□ -1.4
CDCA3-205ENST00000535871 LRRC56Q8IYG6 542 aaPredicted RBP6.3□□□□□ -1.4
CDCA3-205ENST00000535871 FAM9CQ8IZT9 166 aa6.3□□□□□ -1.4
CDCA3-205ENST00000535871 LSMEM2Q8N112 164 aa6.3□□□□□ -1.4
CDCA3-205ENST00000535871 FAM181AQ8N9Y4 354 aa6.3□□□□□ -1.4
CDCA3-205ENST00000535871 ABHD11Q8NFV4 315 aa6.3□□□□□ -1.4
CDCA3-205ENST00000535871 TTLQ8NG68 377 aa6.3□□□□□ -1.4
CDCA3-205ENST00000535871 OR2L8Q8NGY9 312 aa6.3□□□□□ -1.4
CDCA3-205ENST00000535871 ACTRT2Q8TDY3 377 aa6.3□□□□□ -1.4
CDCA3-205ENST00000535871 RHBDD1Q8TEB9 315 aa6.3□□□□□ -1.4
CDCA3-205ENST00000535871 AGAP11Q8TF27 550 aa6.3□□□□□ -1.4
CDCA3-205ENST00000535871 ZNF480Q8WV37 535 aa6.3□□□□□ -1.4
CDCA3-205ENST00000535871 SNX19Q92543 992 aa6.3□□□□□ -1.4
CDCA3-205ENST00000535871 UBE2E3Q969T4 207 aa6.3□□□□□ -1.4
CDCA3-205ENST00000535871 FAM136AQ96C01 138 aa6.3□□□□□ -1.4
CDCA3-205ENST00000535871 REPS1Q96D71 796 aa6.3□□□□□ -1.4
CDCA3-205ENST00000535871 MAELQ96JY0 434 aaKnown RBP6.3□□□□□ -1.4
CDCA3-205ENST00000535871 RMDN2Q96LZ7 410 aa6.3□□□□□ -1.4
CDCA3-205ENST00000535871 C12orf66Q96MD2 445 aa6.3□□□□□ -1.4
CDCA3-205ENST00000535871 EGFL8Q99944 293 aa6.3□□□□□ -1.4
CDCA3-205ENST00000535871 TMEM79Q9BSE2 394 aa6.3□□□□□ -1.4
CDCA3-205ENST00000535871 HGH1Q9BTY7 390 aa6.3□□□□□ -1.4
CDCA3-205ENST00000535871 CCDC28BQ9BUN5 200 aa6.3□□□□□ -1.4
CDCA3-205ENST00000535871 CHRNA10Q9GZZ6 450 aa6.3□□□□□ -1.4
CDCA3-205ENST00000535871 TMEM168Q9H0V1 697 aa6.3□□□□□ -1.4
CDCA3-205ENST00000535871 C12orf65Q9H3J6 166 aaKnown RBP6.3□□□□□ -1.4
CDCA3-205ENST00000535871 NT5DC2Q9H857 520 aa6.3□□□□□ -1.4
CDCA3-205ENST00000535871 NEUROD4Q9HD90 331 aa6.3□□□□□ -1.4
CDCA3-205ENST00000535871 SLC40A1Q9NP59 571 aa6.3□□□□□ -1.4
CDCA3-205ENST00000535871 MLXIPLQ9NP71 852 aa6.3□□□□□ -1.4
CDCA3-205ENST00000535871 SLCO1B3Q9NPD5 702 aa6.3□□□□□ -1.4
CDCA3-205ENST00000535871 CCDC177Q9NQR7 707 aaPredicted RBP6.3□□□□□ -1.4
CDCA3-205ENST00000535871 DNAJC11Q9NVH1 559 aa6.3□□□□□ -1.4
CDCA3-205ENST00000535871 APOBEC3BQ9UH17 382 aaKnown RBP6.3□□□□□ -1.4
CDCA3-205ENST00000535871 ADAMTS6Q9UKP5 1117 aa6.3□□□□□ -1.4
CDCA3-205ENST00000535871 IKZF3Q9UKT9 509 aa6.3□□□□□ -1.4
CDCA3-205ENST00000535871 TRIM33Q9UPN9 1127 aa6.3□□□□□ -1.4
CDCA3-205ENST00000535871 PCDHGB2Q9Y5G2 931 aa6.3□□□□□ -1.4
CDCA3-205ENST00000535871 USH1CQ9Y6N9 552 aa6.3□□□□□ -1.4
CDCA3-205ENST00000535871 PCM1Q15154 2024 aa6.3□□□□□ -1.4
CDCA3-205ENST00000535871 ATXN2Q99700 1313 aaKnown RBP6.29□□□□□ -1.4
CDCA3-205ENST00000535871 GOLGA4Q13439 2230 aaKnown RBP6.29□□□□□ -1.4
CDCA3-205ENST00000535871 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.29□□□□□ -1.4
CDCA3-205ENST00000535871 WDR91A4D1P6 747 aa6.29□□□□□ -1.4
CDCA3-205ENST00000535871 H0YIV9 168 aa6.29□□□□□ -1.4
CDCA3-205ENST00000535871 TNFRSF10AO00220 468 aa6.29□□□□□ -1.4
CDCA3-205ENST00000535871 FOXE1O00358 373 aaPredicted RBP6.29□□□□□ -1.4
CDCA3-205ENST00000535871 AZIN1O14977 448 aa6.29□□□□□ -1.4
CDCA3-205ENST00000535871 SCAMP1O15126 338 aa6.29□□□□□ -1.4
CDCA3-205ENST00000535871 AQP9O43315 295 aa6.29□□□□□ -1.4
CDCA3-205ENST00000535871 NUDT21O43809 227 aaKnown RBP6.29□□□□□ -1.4
CDCA3-205ENST00000535871 PCDHGA12O60330 932 aa6.29□□□□□ -1.4
CDCA3-205ENST00000535871 CCDC22O60826 627 aa6.29□□□□□ -1.4
CDCA3-205ENST00000535871 PIAS2O75928 621 aa6.29□□□□□ -1.4
CDCA3-205ENST00000535871 DCTN3O75935 186 aa6.29□□□□□ -1.4
CDCA3-205ENST00000535871 CLDN9O95484 217 aa6.29□□□□□ -1.4
CDCA3-205ENST00000535871 CER1O95813 267 aa6.29□□□□□ -1.4
CDCA3-205ENST00000535871 KRT6AP02538 564 aa6.29□□□□□ -1.4
CDCA3-205ENST00000535871 KRT6BP04259 564 aa6.29□□□□□ -1.4
CDCA3-205ENST00000535871 WNT1P04628 370 aa6.29□□□□□ -1.4
CDCA3-205ENST00000535871 SYPP08247 313 aa6.29□□□□□ -1.4
CDCA3-205ENST00000535871 JUPP14923 745 aa6.29□□□□□ -1.4
CDCA3-205ENST00000535871 PRPH2P23942 346 aa6.29□□□□□ -1.4
CDCA3-205ENST00000535871 PKLRP30613 574 aa6.29□□□□□ -1.4
CDCA3-205ENST00000535871 ACTR1BP42025 376 aa6.29□□□□□ -1.4
CDCA3-205ENST00000535871 GPR3P46089 330 aa6.29□□□□□ -1.4
CDCA3-205ENST00000535871 KRT6CP48668 564 aa6.29□□□□□ -1.4
CDCA3-205ENST00000535871 PXNP49023 591 aaPredicted RBP6.29□□□□□ -1.4
CDCA3-205ENST00000535871 IDH3AP50213 366 aa6.29□□□□□ -1.4
CDCA3-205ENST00000535871 CCNG1P51959 295 aa6.29□□□□□ -1.4
CDCA3-205ENST00000535871 PGGT1BP53609 377 aa6.29□□□□□ -1.4
CDCA3-205ENST00000535871 SEC24CP53992 1094 aa6.29□□□□□ -1.4
CDCA3-205ENST00000535871 ACTR1AP61163 376 aa6.29□□□□□ -1.4
CDCA3-205ENST00000535871 CBX1P83916 185 aa6.29□□□□□ -1.4
CDCA3-205ENST00000535871 KCNC4Q03721 635 aa6.29□□□□□ -1.4
CDCA3-205ENST00000535871 PRDX1Q06830 199 aaKnown RBP6.29□□□□□ -1.4
CDCA3-205ENST00000535871 SQSTM1Q13501 440 aa6.29□□□□□ -1.4
CDCA3-205ENST00000535871 ANGPT1Q15389 498 aa6.29□□□□□ -1.4
CDCA3-205ENST00000535871 UGT3A2Q3SY77 523 aa6.29□□□□□ -1.4
CDCA3-205ENST00000535871 PAGE2BQ5JRK9 111 aa6.29□□□□□ -1.4
CDCA3-205ENST00000535871 TMEM31Q5JXX7 168 aa6.29□□□□□ -1.4
CDCA3-205ENST00000535871 TPRG1LQ5T0D9 272 aa6.29□□□□□ -1.4
CDCA3-205ENST00000535871 KANK2Q63ZY3 851 aa6.29□□□□□ -1.4
CDCA3-205ENST00000535871 ATG9BQ674R7 924 aa6.29□□□□□ -1.4
CDCA3-205ENST00000535871 GRHL2Q6ISB3 625 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms