RNA–Protein interactions for RNA: ENST00000533946.5

SSBP3-215, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-215ENST00000533946 ELK3P41970 407 aa9.23□□□□□ -0.93
SSBP3-215ENST00000533946 RPL21P46778 160 aaKnown RBP9.23□□□□□ -0.93
SSBP3-215ENST00000533946 CARSP49589 748 aaKnown RBP9.23□□□□□ -0.93
SSBP3-215ENST00000533946 PMS2P54278 862 aa9.23□□□□□ -0.93
SSBP3-215ENST00000533946 TSTA3Q13630 321 aaPredicted RBP9.23□□□□□ -0.93
SSBP3-215ENST00000533946 ZNF460Q14592 562 aa9.23□□□□□ -0.93
SSBP3-215ENST00000533946 KIR2DS3Q14952 304 aa9.23□□□□□ -0.93
SSBP3-215ENST00000533946 PPP1R7Q15435 360 aa9.23□□□□□ -0.93
SSBP3-215ENST00000533946 CYP2A13Q16696 494 aa9.23□□□□□ -0.93
SSBP3-215ENST00000533946 SYT16Q17RD7 645 aa9.23□□□□□ -0.93
SSBP3-215ENST00000533946 HKDC1Q2TB90 917 aa9.23□□□□□ -0.93
SSBP3-215ENST00000533946 AARS2Q5JTZ9 985 aaKnown RBP9.23□□□□□ -0.93
SSBP3-215ENST00000533946 PAPD7Q5XG87 772 aaKnown RBP9.23□□□□□ -0.93
SSBP3-215ENST00000533946 MRNIPQ6NTE8 343 aa9.23□□□□□ -0.93
SSBP3-215ENST00000533946 RHBDD2Q6NTF9 364 aa9.23□□□□□ -0.93
SSBP3-215ENST00000533946 MRPL14Q6P1L8 145 aaKnown RBP9.23□□□□□ -0.93
SSBP3-215ENST00000533946 ZNF449Q6P9G9 518 aa9.23□□□□□ -0.93
SSBP3-215ENST00000533946 C4orf22Q6V702 233 aa9.23□□□□□ -0.93
SSBP3-215ENST00000533946 TTLL10Q6ZVT0 673 aa9.23□□□□□ -0.93
SSBP3-215ENST00000533946 PPP1R32Q7Z5V6 425 aa9.23□□□□□ -0.93
SSBP3-215ENST00000533946 LAPTM4BQ86VI4 370 aa9.23□□□□□ -0.93
SSBP3-215ENST00000533946 PPIL6Q8IXY8 311 aa9.23□□□□□ -0.93
SSBP3-215ENST00000533946 PRSS58Q8IYP2 241 aa9.23□□□□□ -0.93
SSBP3-215ENST00000533946 FDCSPQ8NFU4 85 aa9.23□□□□□ -0.93
SSBP3-215ENST00000533946 ZNF480Q8WV37 535 aa9.23□□□□□ -0.93
SSBP3-215ENST00000533946 EEF1AKMT1Q8WVE0 214 aa9.23□□□□□ -0.93
SSBP3-215ENST00000533946 C10orf90Q96M02 699 aa9.23□□□□□ -0.93
SSBP3-215ENST00000533946 LRFN5Q96NI6 719 aa9.23□□□□□ -0.93
SSBP3-215ENST00000533946 OLFM1Q99784 485 aa9.23□□□□□ -0.93
SSBP3-215ENST00000533946 AARSD1Q9BTE6 412 aaKnown RBP9.23□□□□□ -0.93
SSBP3-215ENST00000533946 DPH7Q9BTV6 452 aa9.23□□□□□ -0.93
SSBP3-215ENST00000533946 ING2Q9H160 280 aa9.23□□□□□ -0.93
SSBP3-215ENST00000533946 SMYD2Q9NRG4 433 aa9.23□□□□□ -0.93
SSBP3-215ENST00000533946 HOMER3Q9NSC5 361 aa9.23□□□□□ -0.93
SSBP3-215ENST00000533946 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.23□□□□□ -0.93
SSBP3-215ENST00000533946 ASIC3Q9UHC3 531 aa9.23□□□□□ -0.93
SSBP3-215ENST00000533946 SERTAD3Q9UJW9 196 aa9.23□□□□□ -0.93
SSBP3-215ENST00000533946 KCND3Q9UK17 655 aa9.23□□□□□ -0.93
SSBP3-215ENST00000533946 SLC39A10Q9ULF5 831 aa9.23□□□□□ -0.93
SSBP3-215ENST00000533946 PLCL2Q9UPR0 1127 aa9.23□□□□□ -0.93
SSBP3-215ENST00000533946 CHMP2BQ9UQN3 213 aa9.23□□□□□ -0.93
SSBP3-215ENST00000533946 POLHQ9Y253 713 aa9.23□□□□□ -0.93
SSBP3-215ENST00000533946 PTRH2Q9Y3E5 179 aaKnown RBP9.23□□□□□ -0.93
SSBP3-215ENST00000533946 CSAG2Q9Y5P2 127 aa9.23□□□□□ -0.93
SSBP3-215ENST00000533946 FAM169AQ9Y6X4 670 aa9.23□□□□□ -0.93
SSBP3-215ENST00000533946 MYO1CO00159 1063 aa9.22□□□□□ -0.93
SSBP3-215ENST00000533946 MATN2O00339 956 aa9.22□□□□□ -0.93
SSBP3-215ENST00000533946 WISP1O95388 367 aa9.22□□□□□ -0.93
SSBP3-215ENST00000533946 TSPAN12O95859 305 aa9.22□□□□□ -0.93
SSBP3-215ENST00000533946 B3GALT4O96024 378 aa9.22□□□□□ -0.93
SSBP3-215ENST00000533946 ESR1P03372 595 aa9.22□□□□□ -0.93
SSBP3-215ENST00000533946 MT-ND3P03897 115 aa9.22□□□□□ -0.93
SSBP3-215ENST00000533946 ERGP11308 486 aa9.22□□□□□ -0.93
SSBP3-215ENST00000533946 UQCRFS1P47985 274 aa9.22□□□□□ -0.93
SSBP3-215ENST00000533946 FNTAP49354 379 aa9.22□□□□□ -0.93
SSBP3-215ENST00000533946 ST13P50502 369 aaKnown RBP9.22□□□□□ -0.93
SSBP3-215ENST00000533946 ITGA8P53708 1063 aa9.22□□□□□ -0.93
SSBP3-215ENST00000533946 RPS15P62841 145 aaKnown RBP9.22□□□□□ -0.93
SSBP3-215ENST00000533946 SRSF11Q05519 484 aaKnown RBP9.22□□□□□ -0.93
SSBP3-215ENST00000533946 THOC5Q13769 683 aaKnown RBP9.22□□□□□ -0.93
SSBP3-215ENST00000533946 PHKG1Q16816 387 aa9.22□□□□□ -0.93
SSBP3-215ENST00000533946 LONRF1Q17RB8 773 aa9.22□□□□□ -0.93
SSBP3-215ENST00000533946 NKAIN1Q4KMZ8 207 aa9.22□□□□□ -0.93
SSBP3-215ENST00000533946 CRTC2Q53ET0 693 aaPredicted RBP9.22□□□□□ -0.93
SSBP3-215ENST00000533946 LACTB2Q53H82 288 aaPredicted RBP9.22□□□□□ -0.93
SSBP3-215ENST00000533946 WASHC2DQ5SRD0 308 aa9.22□□□□□ -0.93
SSBP3-215ENST00000533946 PAQR3Q6TCH7 311 aa9.22□□□□□ -0.93
SSBP3-215ENST00000533946 CAPN12Q6ZSI9 719 aa9.22□□□□□ -0.93
SSBP3-215ENST00000533946 ASB18Q6ZVZ8 466 aa9.22□□□□□ -0.93
SSBP3-215ENST00000533946 PRSS41Q7RTY9 318 aa9.22□□□□□ -0.93
SSBP3-215ENST00000533946 SDCCAG8Q86SQ7 713 aaPredicted RBP9.22□□□□□ -0.93
SSBP3-215ENST00000533946 SYVN1Q86TM6 617 aa9.22□□□□□ -0.93
SSBP3-215ENST00000533946 KCNMB4Q86W47 210 aa9.22□□□□□ -0.93
SSBP3-215ENST00000533946 BPHLQ86WA6 291 aaPredicted RBP9.22□□□□□ -0.93
SSBP3-215ENST00000533946 CARFQ8N187 725 aa9.22□□□□□ -0.93
SSBP3-215ENST00000533946 ARHGEF39Q8N4T4 335 aa9.22□□□□□ -0.93
SSBP3-215ENST00000533946 Q8NA96 180 aa9.22□□□□□ -0.93
SSBP3-215ENST00000533946 C2CD4AQ8NCU7 369 aaPredicted RBP9.22□□□□□ -0.93
SSBP3-215ENST00000533946 OR9A1PQ8NGU1 263 aa9.22□□□□□ -0.93
SSBP3-215ENST00000533946 OR8K5Q8NH50 307 aa9.22□□□□□ -0.93
SSBP3-215ENST00000533946 UBE2Q2Q8WVN8 375 aa9.22□□□□□ -0.93
SSBP3-215ENST00000533946 ASB11Q8WXH4 323 aa9.22□□□□□ -0.93
SSBP3-215ENST00000533946 RAD51AP1Q96B01 352 aa9.22□□□□□ -0.93
SSBP3-215ENST00000533946 ZNF285Q96NJ3 590 aa9.22□□□□□ -0.93
SSBP3-215ENST00000533946 CATSPER2Q96P56 530 aa9.22□□□□□ -0.93
SSBP3-215ENST00000533946 KRT12Q99456 494 aa9.22□□□□□ -0.93
SSBP3-215ENST00000533946 TTC1Q99614 292 aa9.22□□□□□ -0.93
SSBP3-215ENST00000533946 EBNA1BP2Q99848 306 aaKnown RBP9.22□□□□□ -0.93
SSBP3-215ENST00000533946 GPR87Q9BY21 358 aa9.22□□□□□ -0.93
SSBP3-215ENST00000533946 UNKQ9C0B0 810 aaKnown RBP9.22□□□□□ -0.93
SSBP3-215ENST00000533946 ADNPQ9H2P0 1102 aa9.22□□□□□ -0.93
SSBP3-215ENST00000533946 SOX17Q9H6I2 414 aaPredicted RBP9.22□□□□□ -0.93
SSBP3-215ENST00000533946 XAB2Q9HCS7 855 aaKnown RBP9.22□□□□□ -0.93
SSBP3-215ENST00000533946 IRAK4Q9NWZ3 460 aa9.22□□□□□ -0.93
SSBP3-215ENST00000533946 SAMD15Q9P1V8 674 aa9.22□□□□□ -0.93
SSBP3-215ENST00000533946 ZC3H7BQ9UGR2 993 aaKnown RBP9.22□□□□□ -0.93
SSBP3-215ENST00000533946 NDOR1Q9UHB4 597 aa9.22□□□□□ -0.93
SSBP3-215ENST00000533946 TAC3Q9UHF0 121 aa9.22□□□□□ -0.93
SSBP3-215ENST00000533946 PCYOX1Q9UHG3 505 aa9.22□□□□□ -0.93
SSBP3-215ENST00000533946 SNX7Q9UNH6 387 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms