RNA–Protein interactions for RNA: ENST00000533115.5

SSSCA1-207, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-207ENST00000533115 HP1BP3Q5SSJ5 553 aaPredicted RBP29.08■■■□□ 2.25
SSSCA1-207ENST00000533115 CYHR1Q6ZMK1 362 aa29.08■■■□□ 2.25
SSSCA1-207ENST00000533115 FBXO15Q8NCQ5 510 aaPredicted RBP29.08■■■□□ 2.25
SSSCA1-207ENST00000533115 ASB11Q8WXH4 323 aa29.08■■■□□ 2.25
SSSCA1-207ENST00000533115 LRRC39Q96DD0 335 aa29.08■■■□□ 2.25
SSSCA1-207ENST00000533115 CERS2Q96G23 380 aa29.08■■■□□ 2.25
SSSCA1-207ENST00000533115 KRT12Q99456 494 aa29.08■■■□□ 2.25
SSSCA1-207ENST00000533115 PKP4Q99569 1192 aa29.08■■■□□ 2.25
SSSCA1-207ENST00000533115 C17orf62Q9BQA9 187 aa29.08■■■□□ 2.25
SSSCA1-207ENST00000533115 TRIM31Q9BZY9 425 aa29.08■■■□□ 2.25
SSSCA1-207ENST00000533115 PLAC1Q9HBJ0 212 aa29.08■■■□□ 2.25
SSSCA1-207ENST00000533115 TXLNGQ9NUQ3 528 aa29.08■■■□□ 2.25
SSSCA1-207ENST00000533115 CHMP2BQ9UQN3 213 aa29.08■■■□□ 2.25
SSSCA1-207ENST00000533115 SLC28A2O43868 658 aa29.07■■■□□ 2.24
SSSCA1-207ENST00000533115 GABRB3P28472 473 aa29.07■■■□□ 2.24
SSSCA1-207ENST00000533115 CARSP49589 748 aaKnown RBP29.07■■■□□ 2.24
SSSCA1-207ENST00000533115 DCDP81605 110 aaKnown RBP29.07■■■□□ 2.24
SSSCA1-207ENST00000533115 HIF1AQ16665 826 aa29.07■■■□□ 2.24
SSSCA1-207ENST00000533115 FAM69BQ5VUD6 431 aa29.07■■■□□ 2.24
SSSCA1-207ENST00000533115 KIAA0408Q6ZU52 694 aa29.07■■■□□ 2.24
SSSCA1-207ENST00000533115 PRICKLE2Q7Z3G6 844 aa29.07■■■□□ 2.24
SSSCA1-207ENST00000533115 APLFQ8IW19 511 aaPredicted RBP29.07■■■□□ 2.24
SSSCA1-207ENST00000533115 CPNE9Q8IYJ1 553 aa29.07■■■□□ 2.24
SSSCA1-207ENST00000533115 ADAMTS17Q8TE56 1095 aa29.07■■■□□ 2.24
SSSCA1-207ENST00000533115 SMPDL3AQ92484 453 aa29.07■■■□□ 2.24
SSSCA1-207ENST00000533115 NDNQ99608 321 aa29.07■■■□□ 2.24
SSSCA1-207ENST00000533115 DHRS4Q9BTZ2 278 aa29.07■■■□□ 2.24
SSSCA1-207ENST00000533115 ZC3H7BQ9UGR2 993 aaKnown RBP29.07■■■□□ 2.24
SSSCA1-207ENST00000533115 EIF3FO00303 357 aaPredicted RBP29.06■■■□□ 2.24
SSSCA1-207ENST00000533115 RFPL1O75677 317 aa29.06■■■□□ 2.24
SSSCA1-207ENST00000533115 HSD17B2P37059 387 aa29.06■■■□□ 2.24
SSSCA1-207ENST00000533115 GCGRP47871 477 aa29.06■■■□□ 2.24
SSSCA1-207ENST00000533115 ARL4CP56559 192 aa29.06■■■□□ 2.24
SSSCA1-207ENST00000533115 UGT3A1Q6NUS8 523 aa29.06■■■□□ 2.24
SSSCA1-207ENST00000533115 DLG3Q92796 817 aa29.06■■■□□ 2.24
SSSCA1-207ENST00000533115 CFAP36Q96G28 342 aa29.06■■■□□ 2.24
SSSCA1-207ENST00000533115 WDR83Q9BRX9 315 aaKnown RBP29.06■■■□□ 2.24
SSSCA1-207ENST00000533115 PPANQ9NQ55 473 aaKnown RBP29.06■■■□□ 2.24
SSSCA1-207ENST00000533115 ZNF71Q9NQZ8 489 aaPredicted RBP29.06■■■□□ 2.24
SSSCA1-207ENST00000533115 TRMT6Q9UJA5 497 aaKnown RBP29.06■■■□□ 2.24
SSSCA1-207ENST00000533115 TEX264Q9Y6I9 313 aa29.06■■■□□ 2.24
SSSCA1-207ENST00000533115 FER1L5A0AVI2 2057 aa29.06■■■□□ 2.24
SSSCA1-207ENST00000533115 ZNF839A8K0R7 811 aa29.05■■■□□ 2.24
SSSCA1-207ENST00000533115 EFCAB8A8MWE9 144 aa29.05■■■□□ 2.24
SSSCA1-207ENST00000533115 GFYI3L273 518 aa29.05■■■□□ 2.24
SSSCA1-207ENST00000533115 CTSVO60911 334 aa29.05■■■□□ 2.24
SSSCA1-207ENST00000533115 AHSGP02765 367 aa29.05■■■□□ 2.24
SSSCA1-207ENST00000533115 CMPK1P30085 196 aa29.05■■■□□ 2.24
SSSCA1-207ENST00000533115 PNLIPRP1P54315 467 aa29.05■■■□□ 2.24
SSSCA1-207ENST00000533115 TIAL1Q01085 375 aaKnown RBP eCLIP29.05■■■□□ 2.24
SSSCA1-207ENST00000533115 TCTE1Q5JU00 501 aa29.05■■■□□ 2.24
SSSCA1-207ENST00000533115 MLIPQ5VWP3 458 aa29.05■■■□□ 2.24
SSSCA1-207ENST00000533115 SUSD1Q6UWL2 747 aa29.05■■■□□ 2.24
SSSCA1-207ENST00000533115 SELENOSQ9BQE4 189 aa29.05■■■□□ 2.24
SSSCA1-207ENST00000533115 ACAT2Q9BWD1 397 aa29.05■■■□□ 2.24
SSSCA1-207ENST00000533115 ENAMQ9NRM1 1142 aa29.05■■■□□ 2.24
SSSCA1-207ENST00000533115 TAS2R13Q9NYV9 303 aa29.05■■■□□ 2.24
SSSCA1-207ENST00000533115 GPN3Q9UHW5 284 aaPredicted RBP29.05■■■□□ 2.24
SSSCA1-207ENST00000533115 PADI2Q9Y2J8 665 aa29.05■■■□□ 2.24
SSSCA1-207ENST00000533115 MKRN2OSH3BPM6 223 aa29.04■■■□□ 2.24
SSSCA1-207ENST00000533115 J3QKU1 62 aa29.04■■■□□ 2.24
SSSCA1-207ENST00000533115 TP73O15350 636 aa29.04■■■□□ 2.24
SSSCA1-207ENST00000533115 SUV39H1O43463 412 aa29.04■■■□□ 2.24
SSSCA1-207ENST00000533115 ZBTB14O43829 449 aa29.04■■■□□ 2.24
SSSCA1-207ENST00000533115 SLC16A8O95907 504 aa29.04■■■□□ 2.24
SSSCA1-207ENST00000533115 MCM3P25205 808 aa29.04■■■□□ 2.24
SSSCA1-207ENST00000533115 RPA3P35244 121 aaPredicted RBP29.04■■■□□ 2.24
SSSCA1-207ENST00000533115 SKIV2L2P42285 1042 aaKnown RBP29.04■■■□□ 2.24
SSSCA1-207ENST00000533115 ARSFP54793 590 aa29.04■■■□□ 2.24
SSSCA1-207ENST00000533115 NAA25Q14CX7 972 aa29.04■■■□□ 2.24
SSSCA1-207ENST00000533115 TEDDM1Q5T9Z0 273 aa29.04■■■□□ 2.24
SSSCA1-207ENST00000533115 STEAP4Q687X5 459 aa29.04■■■□□ 2.24
SSSCA1-207ENST00000533115 PIWIL4Q7Z3Z4 852 aaKnown RBP29.04■■■□□ 2.24
SSSCA1-207ENST00000533115 GALNT7Q86SF2 657 aa29.04■■■□□ 2.24
SSSCA1-207ENST00000533115 PTRH1Q86Y79 214 aaKnown RBP29.04■■■□□ 2.24
SSSCA1-207ENST00000533115 C17orf53Q8N3J3 647 aaPredicted RBP29.04■■■□□ 2.24
SSSCA1-207ENST00000533115 ZNF285Q96NJ3 590 aa29.04■■■□□ 2.24
SSSCA1-207ENST00000533115 IFT80Q9P2H3 777 aaPredicted RBP29.04■■■□□ 2.24
SSSCA1-207ENST00000533115 TLK1Q9UKI8 766 aa29.04■■■□□ 2.24
SSSCA1-207ENST00000533115 SYF2O95926 243 aaKnown RBP29.03■■■□□ 2.24
SSSCA1-207ENST00000533115 RPL21P46778 160 aaKnown RBP29.03■■■□□ 2.24
SSSCA1-207ENST00000533115 YBX1P67809 324 aaKnown RBP29.03■■■□□ 2.24
SSSCA1-207ENST00000533115 TSTA3Q13630 321 aaPredicted RBP29.03■■■□□ 2.24
SSSCA1-207ENST00000533115 NKAIN1Q4KMZ8 207 aa29.03■■■□□ 2.24
SSSCA1-207ENST00000533115 LACTB2Q53H82 288 aaPredicted RBP29.03■■■□□ 2.24
SSSCA1-207ENST00000533115 RBM20Q5T481 1227 aaKnown RBP29.03■■■□□ 2.24
SSSCA1-207ENST00000533115 LRRC8EQ6NSJ5 796 aa29.03■■■□□ 2.24
SSSCA1-207ENST00000533115 UBE2R2Q712K3 238 aaPredicted RBP29.03■■■□□ 2.24
SSSCA1-207ENST00000533115 ZNF480Q8WV37 535 aa29.03■■■□□ 2.24
SSSCA1-207ENST00000533115 DPH7Q9BTV6 452 aa29.03■■■□□ 2.24
SSSCA1-207ENST00000533115 SLC17A6Q9P2U8 582 aa29.03■■■□□ 2.24
SSSCA1-207ENST00000533115 NDOR1Q9UHB4 597 aa29.03■■■□□ 2.24
SSSCA1-207ENST00000533115 SNX24Q9Y343 169 aa29.03■■■□□ 2.24
SSSCA1-207ENST00000533115 SRPX2O60687 465 aaPredicted RBP29.02■■■□□ 2.24
SSSCA1-207ENST00000533115 KLF7O75840 302 aaPredicted RBP29.02■■■□□ 2.24
SSSCA1-207ENST00000533115 CD63P08962 238 aa29.02■■■□□ 2.24
SSSCA1-207ENST00000533115 ALAS2P22557 587 aa29.02■■■□□ 2.24
SSSCA1-207ENST00000533115 CASQ1P31415 396 aa29.02■■■□□ 2.24
SSSCA1-207ENST00000533115 GRM7Q14831 915 aa29.02■■■□□ 2.24
SSSCA1-207ENST00000533115 YOD1Q5VVQ6 348 aaPredicted RBP29.02■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms