RNA–Protein interactions for RNA: ENST00000531118.5

CD44-232, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 877 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-232ENST00000531118 GLYATL1P3A0A0U1RQE8 302 aa7.83□□□□□ -1.16
CD44-232ENST00000531118 TMEM191CA6NGB0 347 aa7.83□□□□□ -1.16
CD44-232ENST00000531118 FAM171A2A8MVW0 826 aa7.83□□□□□ -1.16
CD44-232ENST00000531118 GAPDHSO14556 408 aaPredicted RBP7.83□□□□□ -1.16
CD44-232ENST00000531118 PRRG2O14669 202 aa7.83□□□□□ -1.16
CD44-232ENST00000531118 UGT1A9O60656 530 aa7.83□□□□□ -1.16
CD44-232ENST00000531118 POLBP06746 335 aa7.83□□□□□ -1.16
CD44-232ENST00000531118 RARAP10276 462 aa7.83□□□□□ -1.16
CD44-232ENST00000531118 UGT1A6P19224 532 aa7.83□□□□□ -1.16
CD44-232ENST00000531118 MSH3P20585 1137 aa7.83□□□□□ -1.16
CD44-232ENST00000531118 UGT1A1P22309 533 aa7.83□□□□□ -1.16
CD44-232ENST00000531118 CCNCP24863 283 aa7.83□□□□□ -1.16
CD44-232ENST00000531118 MCM3P25205 808 aa7.83□□□□□ -1.16
CD44-232ENST00000531118 CHRNB4P30926 498 aa7.83□□□□□ -1.16
CD44-232ENST00000531118 YBX1P67809 324 aaKnown RBP7.83□□□□□ -1.16
CD44-232ENST00000531118 ZNF33BQ06732 778 aa7.83□□□□□ -1.16
CD44-232ENST00000531118 ITGA9Q13797 1035 aa7.83□□□□□ -1.16
CD44-232ENST00000531118 PAFAH1B3Q15102 231 aaKnown RBP7.83□□□□□ -1.16
CD44-232ENST00000531118 PCSK7Q16549 785 aa7.83□□□□□ -1.16
CD44-232ENST00000531118 ABHD17BQ5VST6 288 aa7.83□□□□□ -1.16
CD44-232ENST00000531118 TXNRD3NBQ6F5E7 133 aa7.83□□□□□ -1.16
CD44-232ENST00000531118 LYPD4Q6UWN0 246 aa7.83□□□□□ -1.16
CD44-232ENST00000531118 NAPRTQ6XQN6 538 aa7.83□□□□□ -1.16
CD44-232ENST00000531118 ARHGEF18Q6ZSZ5 1173 aa7.83□□□□□ -1.16
CD44-232ENST00000531118 CEP128Q6ZU80 1094 aa7.83□□□□□ -1.16
CD44-232ENST00000531118 NDUFAF7Q7L592 441 aa7.83□□□□□ -1.16
CD44-232ENST00000531118 CAMKMTQ7Z624 323 aa7.83□□□□□ -1.16
CD44-232ENST00000531118 CD163Q86VB7 1156 aa7.83□□□□□ -1.16
CD44-232ENST00000531118 DTX3LQ8TDB6 740 aa7.83□□□□□ -1.16
CD44-232ENST00000531118 LINC00615Q96LM1 132 aaPredicted RBP7.83□□□□□ -1.16
CD44-232ENST00000531118 FERD3LQ96RJ6 166 aa7.83□□□□□ -1.16
CD44-232ENST00000531118 AGPAT1Q99943 283 aa7.83□□□□□ -1.16
CD44-232ENST00000531118 CCM2Q9BSQ5 444 aa7.83□□□□□ -1.16
CD44-232ENST00000531118 HES7Q9BYE0 225 aa7.83□□□□□ -1.16
CD44-232ENST00000531118 UCK2Q9BZX2 261 aa7.83□□□□□ -1.16
CD44-232ENST00000531118 CLEC4MQ9H2X3 399 aaPredicted RBP7.83□□□□□ -1.16
CD44-232ENST00000531118 UGT1A7Q9HAW7 530 aa7.83□□□□□ -1.16
CD44-232ENST00000531118 UGT1A10Q9HAW8 530 aa7.83□□□□□ -1.16
CD44-232ENST00000531118 UGT1A8Q9HAW9 530 aa7.83□□□□□ -1.16
CD44-232ENST00000531118 SPHK1Q9NYA1 384 aa7.83□□□□□ -1.16
CD44-232ENST00000531118 C3orf18Q9UK00 162 aa7.83□□□□□ -1.16
CD44-232ENST00000531118 ADAM21Q9UKJ8 722 aa7.83□□□□□ -1.16
CD44-232ENST00000531118 RNF6Q9Y252 685 aa7.83□□□□□ -1.16
CD44-232ENST00000531118 L3MBTL1Q9Y468 752 aa7.83□□□□□ -1.16
CD44-232ENST00000531118 ASB1Q9Y576 335 aa7.83□□□□□ -1.16
CD44-232ENST00000531118 IGHV1-45A0A0A0MS14 117 aa7.82□□□□□ -1.16
CD44-232ENST00000531118 IFRD1O00458 451 aaPredicted RBP7.82□□□□□ -1.16
CD44-232ENST00000531118 TTI1O43156 1089 aa7.82□□□□□ -1.16
CD44-232ENST00000531118 SGTAO43765 313 aa7.82□□□□□ -1.16
CD44-232ENST00000531118 KLK8O60259 260 aa7.82□□□□□ -1.16
CD44-232ENST00000531118 LY6G6DO95868 133 aa7.82□□□□□ -1.16
CD44-232ENST00000531118 CHRM5P08912 532 aaPredicted RBP7.82□□□□□ -1.16
CD44-232ENST00000531118 CD48P09326 243 aa7.82□□□□□ -1.16
CD44-232ENST00000531118 MYBL2P10244 700 aa7.82□□□□□ -1.16
CD44-232ENST00000531118 MAGP20916 626 aa7.82□□□□□ -1.16
CD44-232ENST00000531118 PEBP1P30086 187 aaKnown RBP7.82□□□□□ -1.16
CD44-232ENST00000531118 HMGCLP35914 325 aa7.82□□□□□ -1.16
CD44-232ENST00000531118 OR1D4P47884 311 aa7.82□□□□□ -1.16
CD44-232ENST00000531118 PRLHRP49683 370 aa7.82□□□□□ -1.16
CD44-232ENST00000531118 IFI35P80217 286 aaPredicted RBP7.82□□□□□ -1.16
CD44-232ENST00000531118 SLC25A11Q02978 314 aaKnown RBP7.82□□□□□ -1.16
CD44-232ENST00000531118 OLIG2Q13516 323 aa7.82□□□□□ -1.16
CD44-232ENST00000531118 BOP1Q14137 746 aaKnown RBP7.82□□□□□ -1.16
CD44-232ENST00000531118 KRT81Q14533 505 aa7.82□□□□□ -1.16
CD44-232ENST00000531118 NOMO1Q15155 1222 aa7.82□□□□□ -1.16
CD44-232ENST00000531118 DEFB113Q30KQ7 82 aa7.82□□□□□ -1.16
CD44-232ENST00000531118 FAM182AQ5T1J6 154 aa7.82□□□□□ -1.16
CD44-232ENST00000531118 CCDC183Q5T5S1 534 aa7.82□□□□□ -1.16
CD44-232ENST00000531118 ZDHHC20Q5W0Z9 365 aa7.82□□□□□ -1.16
CD44-232ENST00000531118 ATG9BQ674R7 924 aa7.82□□□□□ -1.16
CD44-232ENST00000531118 HOMEZQ8IX15 550 aa7.82□□□□□ -1.16
CD44-232ENST00000531118 ZZZ3Q8IYH5 903 aa7.82□□□□□ -1.16
CD44-232ENST00000531118 CNTD1Q8N815 330 aa7.82□□□□□ -1.16
CD44-232ENST00000531118 TTC29Q8NA56 475 aaPredicted RBP7.82□□□□□ -1.16
CD44-232ENST00000531118 MDS2Q8NDY4 140 aa7.82□□□□□ -1.16
CD44-232ENST00000531118 LILRB4Q8NHJ6 448 aa7.82□□□□□ -1.16
CD44-232ENST00000531118 STT3BQ8TCJ2 826 aa7.82□□□□□ -1.16
CD44-232ENST00000531118 DENND1AQ8TEH3 1009 aa7.82□□□□□ -1.16
CD44-232ENST00000531118 HDAC10Q969S8 669 aa7.82□□□□□ -1.16
CD44-232ENST00000531118 MIEF2Q96C03 454 aa7.82□□□□□ -1.16
CD44-232ENST00000531118 IMP4Q96G21 291 aaKnown RBP7.82□□□□□ -1.16
CD44-232ENST00000531118 SCMH1Q96GD3 660 aa7.82□□□□□ -1.16
CD44-232ENST00000531118 COX4I2Q96KJ9 171 aa7.82□□□□□ -1.16
CD44-232ENST00000531118 TSGA13Q96PP4 275 aa7.82□□□□□ -1.16
CD44-232ENST00000531118 OR52A5Q9H2C5 316 aa7.82□□□□□ -1.16
CD44-232ENST00000531118 MVB12BQ9H7P6 319 aa7.82□□□□□ -1.16
CD44-232ENST00000531118 COG4Q9H9E3 785 aa7.82□□□□□ -1.16
CD44-232ENST00000531118 KCNJ16Q9NPI9 418 aa7.82□□□□□ -1.16
CD44-232ENST00000531118 KLHL1Q9NR64 748 aa7.82□□□□□ -1.16
CD44-232ENST00000531118 TAB2Q9NYJ8 693 aa7.82□□□□□ -1.16
CD44-232ENST00000531118 STMN3Q9NZ72 180 aa7.82□□□□□ -1.16
CD44-232ENST00000531118 GNPTGQ9UJJ9 305 aa7.82□□□□□ -1.16
CD44-232ENST00000531118 MAU2Q9Y6X3 613 aa7.82□□□□□ -1.16
CD44-232ENST00000531118 SOWAHDA6NJG2 315 aa7.81□□□□□ -1.16
CD44-232ENST00000531118 ADARB2-AS1A8MUL3 147 aa7.81□□□□□ -1.16
CD44-232ENST00000531118 TMCO5BA8MYB1 307 aa7.81□□□□□ -1.16
CD44-232ENST00000531118 KCNK1O00180 336 aa7.81□□□□□ -1.16
CD44-232ENST00000531118 ASNA1O43681 348 aa7.81□□□□□ -1.16
CD44-232ENST00000531118 GADD45BO75293 160 aaPredicted RBP7.81□□□□□ -1.16
CD44-232ENST00000531118 ATE1O95260 518 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 95.7 ms