RNA–Protein interactions for RNA: ENST00000530906.1

PCF11-205, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-205ENST00000530906 SLC6A12P48065 614 aa5.42□□□□□ -1.54
PCF11-205ENST00000530906 HSPA7P48741 367 aa5.42□□□□□ -1.54
PCF11-205ENST00000530906 PRLHRP49683 370 aa5.42□□□□□ -1.54
PCF11-205ENST00000530906 STK19P49842 368 aaPredicted RBP5.42□□□□□ -1.54
PCF11-205ENST00000530906 CHN2P52757 468 aa5.42□□□□□ -1.54
PCF11-205ENST00000530906 DIO3P55073 304 aa5.42□□□□□ -1.54
PCF11-205ENST00000530906 C21orf58P58505 322 aa5.42□□□□□ -1.54
PCF11-205ENST00000530906 ERVFC1P60507 584 aa5.42□□□□□ -1.54
PCF11-205ENST00000530906 CREB5Q02930 508 aa5.42□□□□□ -1.54
PCF11-205ENST00000530906 LRRC74AQ0VAA2 488 aa5.42□□□□□ -1.54
PCF11-205ENST00000530906 ABRQ12979 859 aa5.42□□□□□ -1.54
PCF11-205ENST00000530906 CSTF3Q12996 717 aaKnown RBP5.42□□□□□ -1.54
PCF11-205ENST00000530906 CDK5R2Q13319 367 aa5.42□□□□□ -1.54
PCF11-205ENST00000530906 PWP1Q13610 501 aa5.42□□□□□ -1.54
PCF11-205ENST00000530906 PDGFRLQ15198 375 aa5.42□□□□□ -1.54
PCF11-205ENST00000530906 IMPG1Q17R60 797 aa5.42□□□□□ -1.54
PCF11-205ENST00000530906 AP5B1Q2VPB7 878 aa5.42□□□□□ -1.54
PCF11-205ENST00000530906 VPS26BQ4G0F5 336 aa5.42□□□□□ -1.54
PCF11-205ENST00000530906 CYP27C1Q4G0S4 372 aa5.42□□□□□ -1.54
PCF11-205ENST00000530906 ATP13A5Q4VNC0 1218 aa5.42□□□□□ -1.54
PCF11-205ENST00000530906 LY6G5CQ5SRR4 150 aa5.42□□□□□ -1.54
PCF11-205ENST00000530906 HENMT1Q5T8I9 393 aaKnown RBP5.42□□□□□ -1.54
PCF11-205ENST00000530906 LIPJQ5W064 366 aa5.42□□□□□ -1.54
PCF11-205ENST00000530906 TMEM154Q6P9G4 183 aa5.42□□□□□ -1.54
PCF11-205ENST00000530906 CYP20A1Q6UW02 462 aa5.42□□□□□ -1.54
PCF11-205ENST00000530906 RNF111Q6ZNA4 994 aa5.42□□□□□ -1.54
PCF11-205ENST00000530906 Q6ZSR9 355 aa5.42□□□□□ -1.54
PCF11-205ENST00000530906 ERMP1Q7Z2K6 904 aa5.42□□□□□ -1.54
PCF11-205ENST00000530906 TMCO2Q7Z6W1 182 aaPredicted RBP5.42□□□□□ -1.54
PCF11-205ENST00000530906 UBE2Q1Q7Z7E8 422 aa5.42□□□□□ -1.54
PCF11-205ENST00000530906 DSG4Q86SJ6 1040 aa5.42□□□□□ -1.54
PCF11-205ENST00000530906 TSPAN33Q86UF1 283 aa5.42□□□□□ -1.54
PCF11-205ENST00000530906 ZSWIM9Q86XI8 627 aa5.42□□□□□ -1.54
PCF11-205ENST00000530906 CLDN19Q8N6F1 224 aa5.42□□□□□ -1.54
PCF11-205ENST00000530906 PAPD5Q8NDF8 572 aaKnown RBP5.42□□□□□ -1.54
PCF11-205ENST00000530906 PHC3Q8NDX5 983 aa5.42□□□□□ -1.54
PCF11-205ENST00000530906 TMIEQ8NEW7 156 aa5.42□□□□□ -1.54
PCF11-205ENST00000530906 OR52B6Q8NGF0 335 aa5.42□□□□□ -1.54
PCF11-205ENST00000530906 OR9I1Q8NGQ6 314 aa5.42□□□□□ -1.54
PCF11-205ENST00000530906 OR6K2Q8NGY2 324 aa5.42□□□□□ -1.54
PCF11-205ENST00000530906 PROKR1Q8TCW9 393 aa5.42□□□□□ -1.54
PCF11-205ENST00000530906 CSGALNACT1Q8TDX6 532 aa5.42□□□□□ -1.54
PCF11-205ENST00000530906 OSCP1Q8WVF1 389 aa5.42□□□□□ -1.54
PCF11-205ENST00000530906 UCMAQ8WVF2 138 aa5.42□□□□□ -1.54
PCF11-205ENST00000530906 BTN2A2Q8WVV5 523 aa5.42□□□□□ -1.54
PCF11-205ENST00000530906 RAB7BQ96AH8 199 aa5.42□□□□□ -1.54
PCF11-205ENST00000530906 TMEM125Q96AQ2 219 aa5.42□□□□□ -1.54
PCF11-205ENST00000530906 VOPP1Q96AW1 172 aa5.42□□□□□ -1.54
PCF11-205ENST00000530906 EME1Q96AY2 570 aa5.42□□□□□ -1.54
PCF11-205ENST00000530906 TESCQ96BS2 214 aa5.42□□□□□ -1.54
PCF11-205ENST00000530906 MISP3Q96FF7 219 aa5.42□□□□□ -1.54
PCF11-205ENST00000530906 PPP1R16AQ96I34 528 aa5.42□□□□□ -1.54
PCF11-205ENST00000530906 RPL10LQ96L21 214 aaKnown RBP5.42□□□□□ -1.54
PCF11-205ENST00000530906 MRGPRX3Q96LB0 322 aa5.42□□□□□ -1.54
PCF11-205ENST00000530906 ZNF597Q96LX8 424 aa5.42□□□□□ -1.54
PCF11-205ENST00000530906 FOPNLQ96NB1 174 aa5.42□□□□□ -1.54
PCF11-205ENST00000530906 KLHL32Q96NJ5 620 aa5.42□□□□□ -1.54
PCF11-205ENST00000530906 SMIM14Q96QK8 99 aa5.42□□□□□ -1.54
PCF11-205ENST00000530906 KCNA7Q96RP8 456 aa5.42□□□□□ -1.54
PCF11-205ENST00000530906 CDCA3Q99618 268 aaPredicted RBP5.42□□□□□ -1.54
PCF11-205ENST00000530906 KCTD14Q9BQ13 255 aaPredicted RBP5.42□□□□□ -1.54
PCF11-205ENST00000530906 CENPKQ9BS16 269 aa5.42□□□□□ -1.54
PCF11-205ENST00000530906 TMEM79Q9BSE2 394 aa5.42□□□□□ -1.54
PCF11-205ENST00000530906 C9orf16Q9BUW7 83 aa5.42□□□□□ -1.54
PCF11-205ENST00000530906 BOCQ9BWV1 1114 aa5.42□□□□□ -1.54
PCF11-205ENST00000530906 APOL5Q9BWW9 433 aa5.42□□□□□ -1.54
PCF11-205ENST00000530906 SPATA16Q9BXB7 569 aa5.42□□□□□ -1.54
PCF11-205ENST00000530906 CCDC86Q9H6F5 360 aaKnown RBP5.42□□□□□ -1.54
PCF11-205ENST00000530906 RMND5AQ9H871 391 aa5.42□□□□□ -1.54
PCF11-205ENST00000530906 ACTR8Q9H981 624 aa5.42□□□□□ -1.54
PCF11-205ENST00000530906 TRPV4Q9HBA0 871 aa5.42□□□□□ -1.54
PCF11-205ENST00000530906 LRTM1Q9HBL6 345 aa5.42□□□□□ -1.54
PCF11-205ENST00000530906 DNAJC11Q9NVH1 559 aa5.42□□□□□ -1.54
PCF11-205ENST00000530906 C1orf109Q9NX04 203 aa5.42□□□□□ -1.54
PCF11-205ENST00000530906 ARL15Q9NXU5 204 aa5.42□□□□□ -1.54
PCF11-205ENST00000530906 GDE1Q9NZC3 331 aa5.42□□□□□ -1.54
PCF11-205ENST00000530906 GPRC5BQ9NZH0 403 aa5.42□□□□□ -1.54
PCF11-205ENST00000530906 IL36AQ9UHA7 158 aa5.42□□□□□ -1.54
PCF11-205ENST00000530906 CLEC4EQ9ULY5 219 aa5.42□□□□□ -1.54
PCF11-205ENST00000530906 BTRCQ9Y297 605 aa5.42□□□□□ -1.54
PCF11-205ENST00000530906 MRPS23Q9Y3D9 190 aaKnown RBP5.42□□□□□ -1.54
PCF11-205ENST00000530906 CCL27Q9Y4X3 112 aa5.42□□□□□ -1.54
PCF11-205ENST00000530906 TIMM22Q9Y584 194 aa5.42□□□□□ -1.54
PCF11-205ENST00000530906 U3KQE9 123 aa5.42□□□□□ -1.54
PCF11-205ENST00000530906 EDDM13A0A1B0GTR0 161 aa5.41□□□□□ -1.54
PCF11-205ENST00000530906 C17orf113A0A1B0GUU1 675 aa5.41□□□□□ -1.54
PCF11-205ENST00000530906 SMIM31A0A1B0GVY4 71 aa5.41□□□□□ -1.54
PCF11-205ENST00000530906 LINC01553A4QN01 128 aa5.41□□□□□ -1.54
PCF11-205ENST00000530906 IQCF5A8MTL0 148 aa5.41□□□□□ -1.54
PCF11-205ENST00000530906 HIDE1A8MVS5 230 aa5.41□□□□□ -1.54
PCF11-205ENST00000530906 SCAMP3O14828 347 aaKnown RBP5.41□□□□□ -1.54
PCF11-205ENST00000530906 WNT9AO14904 365 aa5.41□□□□□ -1.54
PCF11-205ENST00000530906 NPC1O15118 1278 aa5.41□□□□□ -1.54
PCF11-205ENST00000530906 ARPC2O15144 300 aa5.41□□□□□ -1.54
PCF11-205ENST00000530906 ERN1O75460 977 aaKnown RBP5.41□□□□□ -1.54
PCF11-205ENST00000530906 PSIP1O75475 530 aaKnown RBP5.41□□□□□ -1.54
PCF11-205ENST00000530906 LEFTY1O75610 366 aa5.41□□□□□ -1.54
PCF11-205ENST00000530906 KCNH1O95259 989 aa5.41□□□□□ -1.54
PCF11-205ENST00000530906 CYP17A1P05093 508 aa5.41□□□□□ -1.54
PCF11-205ENST00000530906 CISD3P0C7P0 127 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms