RNA–Protein interactions for RNA: ENST00000530516.1

NUP98-218, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 391 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-218ENST00000530516 ADGRA1Q86SQ6 560 aa2.48□□□□□ -2.01
NUP98-218ENST00000530516 LRRTM1Q86UE6 522 aa2.48□□□□□ -2.01
NUP98-218ENST00000530516 NIPA2Q8N8Q9 360 aa2.48□□□□□ -2.01
NUP98-218ENST00000530516 AMER3Q8N944 861 aa2.48□□□□□ -2.01
NUP98-218ENST00000530516 THAP8Q8NA92 274 aa2.48□□□□□ -2.01
NUP98-218ENST00000530516 MCUQ8NE86 351 aa2.48□□□□□ -2.01
NUP98-218ENST00000530516 APPL2Q8NEU8 664 aa2.48□□□□□ -2.01
NUP98-218ENST00000530516 ZNF519Q8TB69 540 aa2.48□□□□□ -2.01
NUP98-218ENST00000530516 GATAD1Q8WUU5 269 aa2.48□□□□□ -2.01
NUP98-218ENST00000530516 APOBEC4Q8WW27 367 aaKnown RBP2.48□□□□□ -2.01
NUP98-218ENST00000530516 SYN2Q92777 582 aaPredicted RBP2.48□□□□□ -2.01
NUP98-218ENST00000530516 SLCO2A1Q92959 643 aa2.48□□□□□ -2.01
NUP98-218ENST00000530516 ZNF486Q96H40 463 aaPredicted RBP2.48□□□□□ -2.01
NUP98-218ENST00000530516 ZNF830Q96NB3 372 aaPredicted RBP2.48□□□□□ -2.01
NUP98-218ENST00000530516 ZNF300Q96RE9 604 aaPredicted RBP2.48□□□□□ -2.01
NUP98-218ENST00000530516 CCDC3Q9BQI4 270 aa2.48□□□□□ -2.01
NUP98-218ENST00000530516 POLR3GLQ9BT43 218 aa2.48□□□□□ -2.01
NUP98-218ENST00000530516 Q9H8V8 135 aa2.48□□□□□ -2.01
NUP98-218ENST00000530516 OLAHQ9NV23 265 aa2.48□□□□□ -2.01
NUP98-218ENST00000530516 HAO2Q9NYQ3 351 aa2.48□□□□□ -2.01
NUP98-218ENST00000530516 MRPL15Q9P015 296 aaKnown RBP2.48□□□□□ -2.01
NUP98-218ENST00000530516 NEMP2A6NFY4 417 aa2.47□□□□□ -2.01
NUP98-218ENST00000530516 MPTX1A8MV57 137 aa2.47□□□□□ -2.01
NUP98-218ENST00000530516 PTGESO14684 152 aa2.47□□□□□ -2.01
NUP98-218ENST00000530516 PFKFB1P16118 471 aa2.47□□□□□ -2.01
NUP98-218ENST00000530516 CD27P26842 260 aa2.47□□□□□ -2.01
NUP98-218ENST00000530516 SHC1P29353 583 aa2.47□□□□□ -2.01
NUP98-218ENST00000530516 MAPK12P53778 367 aa2.47□□□□□ -2.01
NUP98-218ENST00000530516 CLNS1AP54105 237 aaKnown RBP2.47□□□□□ -2.01
NUP98-218ENST00000530516 GUCY2DQ02846 1103 aa2.47□□□□□ -2.01
NUP98-218ENST00000530516 LY6DQ14210 128 aa2.47□□□□□ -2.01
NUP98-218ENST00000530516 IL11RAQ14626 422 aa2.47□□□□□ -2.01
NUP98-218ENST00000530516 MTF1Q14872 753 aa2.47□□□□□ -2.01
NUP98-218ENST00000530516 MAPRE1Q15691 268 aaKnown RBP2.47□□□□□ -2.01
NUP98-218ENST00000530516 EXT1Q16394 746 aa2.47□□□□□ -2.01
NUP98-218ENST00000530516 SLC35D3Q5M8T2 416 aa2.47□□□□□ -2.01
NUP98-218ENST00000530516 PAQR6Q6TCH4 344 aa2.47□□□□□ -2.01
NUP98-218ENST00000530516 IL17RELQ6ZVW7 336 aa2.47□□□□□ -2.01
NUP98-218ENST00000530516 CATSPERDQ86XM0 798 aa2.47□□□□□ -2.01
NUP98-218ENST00000530516 DNAAF5Q86Y56 855 aa2.47□□□□□ -2.01
NUP98-218ENST00000530516 OR13C3Q8NGS6 347 aa2.47□□□□□ -2.01
NUP98-218ENST00000530516 GTF3AQ92664 365 aaKnown RBP2.47□□□□□ -2.01
NUP98-218ENST00000530516 SLAMF9Q96A28 289 aa2.47□□□□□ -2.01
NUP98-218ENST00000530516 JAKMIP2Q96AA8 810 aa2.47□□□□□ -2.01
NUP98-218ENST00000530516 PTERQ96BW5 349 aa2.47□□□□□ -2.01
NUP98-218ENST00000530516 SFXN2Q96NB2 322 aa2.47□□□□□ -2.01
NUP98-218ENST00000530516 NECTIN4Q96NY8 510 aa2.47□□□□□ -2.01
NUP98-218ENST00000530516 DGAT2Q96PD7 388 aa2.47□□□□□ -2.01
NUP98-218ENST00000530516 GCNAQ96QF7 691 aa2.47□□□□□ -2.01
NUP98-218ENST00000530516 USP28Q96RU2 1077 aa2.47□□□□□ -2.01
NUP98-218ENST00000530516 DGCR6LQ9BY27 220 aa2.47□□□□□ -2.01
NUP98-218ENST00000530516 GPR88Q9GZN0 384 aa2.47□□□□□ -2.01
NUP98-218ENST00000530516 WWTR1Q9GZV5 400 aa2.47□□□□□ -2.01
NUP98-218ENST00000530516 MIS12Q9H081 205 aa2.47□□□□□ -2.01
NUP98-218ENST00000530516 UPF3AQ9H1J1 476 aaKnown RBP2.47□□□□□ -2.01
NUP98-218ENST00000530516 TLE6Q9H808 572 aa2.47□□□□□ -2.01
NUP98-218ENST00000530516 ANKZF1Q9H8Y5 726 aa2.47□□□□□ -2.01
NUP98-218ENST00000530516 NSMCE4AQ9NXX6 385 aa2.47□□□□□ -2.01
NUP98-218ENST00000530516 OR6C2Q9NZP2 312 aa2.47□□□□□ -2.01
NUP98-218ENST00000530516 RNF150Q9ULK6 438 aa2.47□□□□□ -2.01
NUP98-218ENST00000530516 TMEM5Q9Y2B1 443 aa2.47□□□□□ -2.01
NUP98-218ENST00000530516 CSAG2Q9Y5P2 127 aa2.47□□□□□ -2.01
NUP98-218ENST00000530516 SNX8Q9Y5X2 465 aa2.47□□□□□ -2.01
NUP98-218ENST00000530516 IGHV3OR16-10A0A075B7F0 116 aa2.46□□□□□ -2.02
NUP98-218ENST00000530516 A0A1W2PPK0 400 aa2.46□□□□□ -2.02
NUP98-218ENST00000530516 A0A1W2PPR1 153 aa2.46□□□□□ -2.02
NUP98-218ENST00000530516 TRIM77I1YAP6 450 aa2.46□□□□□ -2.02
NUP98-218ENST00000530516 FPGTO14772 594 aa2.46□□□□□ -2.02
NUP98-218ENST00000530516 SPRY1O43609 319 aaPredicted RBP2.46□□□□□ -2.02
NUP98-218ENST00000530516 ERAL1O75616 437 aaKnown RBP2.46□□□□□ -2.02
NUP98-218ENST00000530516 TRUB2O95900 331 aaKnown RBP2.46□□□□□ -2.02
NUP98-218ENST00000530516 RAB40ALP0C0E4 278 aa2.46□□□□□ -2.02
NUP98-218ENST00000530516 LINGO3P0C6S8 592 aa2.46□□□□□ -2.02
NUP98-218ENST00000530516 GP1BBP13224 206 aa2.46□□□□□ -2.02
NUP98-218ENST00000530516 CYP11B2P19099 503 aa2.46□□□□□ -2.02
NUP98-218ENST00000530516 RBMS1P29558 406 aaKnown RBP2.46□□□□□ -2.02
NUP98-218ENST00000530516 TLX1P31314 330 aaPredicted RBP2.46□□□□□ -2.02
NUP98-218ENST00000530516 CSTF2P33240 577 aaKnown RBP eCLIP2.46□□□□□ -2.02
NUP98-218ENST00000530516 KRTAP12-2P59991 146 aa2.46□□□□□ -2.02
NUP98-218ENST00000530516 HSPB3Q12988 150 aa2.46□□□□□ -2.02
NUP98-218ENST00000530516 CALCOCO2Q13137 446 aa2.46□□□□□ -2.02
NUP98-218ENST00000530516 RIGQ13278 110 aa2.46□□□□□ -2.02
NUP98-218ENST00000530516 ITGA7Q13683 1181 aa2.46□□□□□ -2.02
NUP98-218ENST00000530516 TAF1BQ53T94 588 aaPredicted RBP2.46□□□□□ -2.02
NUP98-218ENST00000530516 PRR27Q6MZM9 219 aa2.46□□□□□ -2.02
NUP98-218ENST00000530516 C11orf63Q6NUN7 778 aa2.46□□□□□ -2.02
NUP98-218ENST00000530516 MFSD12Q6NUT3 480 aa2.46□□□□□ -2.02
NUP98-218ENST00000530516 GPRIN3Q6ZVF9 776 aa2.46□□□□□ -2.02
NUP98-218ENST00000530516 Q8N377 158 aa2.46□□□□□ -2.02
NUP98-218ENST00000530516 GPRC5AQ8NFJ5 357 aa2.46□□□□□ -2.02
NUP98-218ENST00000530516 OR10Q1Q8NGQ4 319 aa2.46□□□□□ -2.02
NUP98-218ENST00000530516 C11orf45Q8TAV5 145 aa2.46□□□□□ -2.02
NUP98-218ENST00000530516 ARHGAP45Q92619 1136 aa2.46□□□□□ -2.02
NUP98-218ENST00000530516 C4orf45Q96LM5 186 aa2.46□□□□□ -2.02
NUP98-218ENST00000530516 PRICKLE1Q96MT3 831 aaPredicted RBP2.46□□□□□ -2.02
NUP98-218ENST00000530516 FAM218AQ96MZ4 157 aa2.46□□□□□ -2.02
NUP98-218ENST00000530516 LRRC61Q9BV99 259 aa2.46□□□□□ -2.02
NUP98-218ENST00000530516 KLHL4Q9C0H6 718 aa2.46□□□□□ -2.02
NUP98-218ENST00000530516 TRPV4Q9HBA0 871 aa2.46□□□□□ -2.02
NUP98-218ENST00000530516 SPHK2Q9NRA0 654 aa2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms