RNA–Protein interactions for RNA: ENST00000529856.5

CCDC90B-216, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,039 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-216ENST00000529856 INTS7Q9NVH2 962 aaKnown RBP12.2□□□□□ -0.46
CCDC90B-216ENST00000529856 NINJ2Q9NZG7 142 aa12.2□□□□□ -0.46
CCDC90B-216ENST00000529856 LHX6Q9UPM6 363 aa12.2□□□□□ -0.46
CCDC90B-216ENST00000529856 KLK4Q9Y5K2 254 aa12.2□□□□□ -0.46
CCDC90B-216ENST00000529856 SPTBP11277 2137 aa12.2□□□□□ -0.46
CCDC90B-216ENST00000529856 PTPRQQ9UMZ3 2332 aa12.19□□□□□ -0.46
CCDC90B-216ENST00000529856 LOC101059948A0A1B0GTJ6 334 aa12.19□□□□□ -0.46
CCDC90B-216ENST00000529856 E7ENX8 843 aa12.19□□□□□ -0.46
CCDC90B-216ENST00000529856 K7ENP7 123 aa12.19□□□□□ -0.46
CCDC90B-216ENST00000529856 SCRG1O75711 98 aa12.19□□□□□ -0.46
CCDC90B-216ENST00000529856 MT-ND3P03897 115 aa12.19□□□□□ -0.46
CCDC90B-216ENST00000529856 NTRK1P04629 796 aa12.19□□□□□ -0.46
CCDC90B-216ENST00000529856 ZNF37AP17032 561 aaPredicted RBP12.19□□□□□ -0.46
CCDC90B-216ENST00000529856 IMPA1P29218 277 aa12.19□□□□□ -0.46
CCDC90B-216ENST00000529856 RPA3P35244 121 aaPredicted RBP12.19□□□□□ -0.46
CCDC90B-216ENST00000529856 SPRP35270 261 aaPredicted RBP12.19□□□□□ -0.46
CCDC90B-216ENST00000529856 GRIA3P42263 894 aa12.19□□□□□ -0.46
CCDC90B-216ENST00000529856 SLC12A2P55011 1212 aa12.19□□□□□ -0.46
CCDC90B-216ENST00000529856 ITGA1P56199 1179 aa12.19□□□□□ -0.46
CCDC90B-216ENST00000529856 CXADRP78310 365 aa12.19□□□□□ -0.46
CCDC90B-216ENST00000529856 TAP2Q03519 686 aa12.19□□□□□ -0.46
CCDC90B-216ENST00000529856 INO80CQ6PI98 192 aaPredicted RBP12.19□□□□□ -0.46
CCDC90B-216ENST00000529856 SUSD1Q6UWL2 747 aa12.19□□□□□ -0.46
CCDC90B-216ENST00000529856 TMEM126BQ8IUX1 230 aa12.19□□□□□ -0.46
CCDC90B-216ENST00000529856 IFT20Q8IY31 132 aa12.19□□□□□ -0.46
CCDC90B-216ENST00000529856 LRRC56Q8IYG6 542 aaPredicted RBP12.19□□□□□ -0.46
CCDC90B-216ENST00000529856 SYTL1Q8IYJ3 562 aa12.19□□□□□ -0.46
CCDC90B-216ENST00000529856 PPFIBP2Q8ND30 876 aa12.19□□□□□ -0.46
CCDC90B-216ENST00000529856 ANKRD7Q92527 254 aa12.19□□□□□ -0.46
CCDC90B-216ENST00000529856 GPR22Q99680 433 aa12.19□□□□□ -0.46
CCDC90B-216ENST00000529856 PADI1Q9ULC6 663 aa12.19□□□□□ -0.46
CCDC90B-216ENST00000529856 PLCL2Q9UPR0 1127 aa12.19□□□□□ -0.46
CCDC90B-216ENST00000529856 PCDHB3Q9Y5E6 796 aa12.19□□□□□ -0.46
CCDC90B-216ENST00000529856 ANKRD12Q6UB98 2062 aa12.18□□□□□ -0.46
CCDC90B-216ENST00000529856 E7EQ34 232 aa12.18□□□□□ -0.46
CCDC90B-216ENST00000529856 H3BMH7 237 aa12.18□□□□□ -0.46
CCDC90B-216ENST00000529856 CPNE3O75131 537 aaKnown RBP12.18□□□□□ -0.46
CCDC90B-216ENST00000529856 FAM155BO75949 473 aa12.18□□□□□ -0.46
CCDC90B-216ENST00000529856 WISP3O95389 354 aaPredicted RBP12.18□□□□□ -0.46
CCDC90B-216ENST00000529856 HIST1H2AGP0C0S8 130 aaPredicted RBP12.18□□□□□ -0.46
CCDC90B-216ENST00000529856 RHOXF2BP0C7M4 288 aa12.18□□□□□ -0.46
CCDC90B-216ENST00000529856 CCNYL3P0C7X3 344 aa12.18□□□□□ -0.46
CCDC90B-216ENST00000529856 LIFP15018 202 aa12.18□□□□□ -0.46
CCDC90B-216ENST00000529856 WT1P19544 449 aaPredicted RBP12.18□□□□□ -0.46
CCDC90B-216ENST00000529856 HIST1H2ADP20671 130 aa12.18□□□□□ -0.46
CCDC90B-216ENST00000529856 CMPK1P30085 196 aa12.18□□□□□ -0.46
CCDC90B-216ENST00000529856 PHBP35232 272 aa12.18□□□□□ -0.46
CCDC90B-216ENST00000529856 STAT5AP42229 794 aa12.18□□□□□ -0.46
CCDC90B-216ENST00000529856 YBX1P67809 324 aaKnown RBP12.18□□□□□ -0.46
CCDC90B-216ENST00000529856 PRDX1Q06830 199 aaKnown RBP12.18□□□□□ -0.46
CCDC90B-216ENST00000529856 TSTA3Q13630 321 aaPredicted RBP12.18□□□□□ -0.46
CCDC90B-216ENST00000529856 ZNF460Q14592 562 aa12.18□□□□□ -0.46
CCDC90B-216ENST00000529856 USP10Q14694 798 aaKnown RBP12.18□□□□□ -0.46
CCDC90B-216ENST00000529856 PHKG1Q16816 387 aa12.18□□□□□ -0.46
CCDC90B-216ENST00000529856 DEFB110Q30KQ9 67 aa12.18□□□□□ -0.46
CCDC90B-216ENST00000529856 ZC3H12BQ5HYM0 836 aaKnown RBP12.18□□□□□ -0.46
CCDC90B-216ENST00000529856 ARHGAP40Q5TG30 622 aa12.18□□□□□ -0.46
CCDC90B-216ENST00000529856 PRAMEF17Q5VTA0 474 aa12.18□□□□□ -0.46
CCDC90B-216ENST00000529856 GPR155Q7Z3F1 870 aa12.18□□□□□ -0.46
CCDC90B-216ENST00000529856 MCATQ8IVS2 390 aaKnown RBP12.18□□□□□ -0.46
CCDC90B-216ENST00000529856 SLC38A9Q8NBW4 561 aa12.18□□□□□ -0.46
CCDC90B-216ENST00000529856 LRRN4CLQ8ND94 238 aa12.18□□□□□ -0.46
CCDC90B-216ENST00000529856 ANKRD49Q8WVL7 239 aa12.18□□□□□ -0.46
CCDC90B-216ENST00000529856 N4BP2L2Q92802 583 aaPredicted RBP12.18□□□□□ -0.46
CCDC90B-216ENST00000529856 TSPAN17Q96FV3 270 aa12.18□□□□□ -0.46
CCDC90B-216ENST00000529856 HIST1H2AHQ96KK5 128 aa12.18□□□□□ -0.46
CCDC90B-216ENST00000529856 LRFN5Q96NI6 719 aa12.18□□□□□ -0.46
CCDC90B-216ENST00000529856 CYTH2Q99418 400 aa12.18□□□□□ -0.46
CCDC90B-216ENST00000529856 HIST1H2AJQ99878 128 aa12.18□□□□□ -0.46
CCDC90B-216ENST00000529856 RHOXF2Q9BQY4 288 aa12.18□□□□□ -0.46
CCDC90B-216ENST00000529856 H2AFJQ9BTM1 129 aa12.18□□□□□ -0.46
CCDC90B-216ENST00000529856 ACAT2Q9BWD1 397 aa12.18□□□□□ -0.46
CCDC90B-216ENST00000529856 FUT8Q9BYC5 575 aa12.18□□□□□ -0.46
CCDC90B-216ENST00000529856 TRIM54Q9BYV2 358 aa12.18□□□□□ -0.46
CCDC90B-216ENST00000529856 SPRTNQ9H040 489 aaPredicted RBP12.18□□□□□ -0.46
CCDC90B-216ENST00000529856 CDC42EP4Q9H3Q1 356 aaKnown RBP12.18□□□□□ -0.46
CCDC90B-216ENST00000529856 CAB39LQ9H9S4 337 aa12.18□□□□□ -0.46
CCDC90B-216ENST00000529856 GPAMQ9HCL2 828 aa12.18□□□□□ -0.46
CCDC90B-216ENST00000529856 EURLQ9NYK6 297 aa12.18□□□□□ -0.46
CCDC90B-216ENST00000529856 STOX2Q9P2F5 926 aaPredicted RBP12.18□□□□□ -0.46
CCDC90B-216ENST00000529856 IKZF3Q9UKT9 509 aa12.18□□□□□ -0.46
CCDC90B-216ENST00000529856 NFU1Q9UMS0 254 aa12.18□□□□□ -0.46
CCDC90B-216ENST00000529856 NOVA2Q9UNW9 492 aaKnown RBP12.18□□□□□ -0.46
CCDC90B-216ENST00000529856 ITPR1Q14643 2758 aa12.17□□□□□ -0.46
CCDC90B-216ENST00000529856 TERTO14746 1132 aaKnown RBP12.17□□□□□ -0.46
CCDC90B-216ENST00000529856 ZNF749O43361 778 aa12.17□□□□□ -0.46
CCDC90B-216ENST00000529856 ZNF500O60304 480 aaPredicted RBP12.17□□□□□ -0.46
CCDC90B-216ENST00000529856 OR2B3O76000 313 aa12.17□□□□□ -0.46
CCDC90B-216ENST00000529856 CTSBP07858 339 aa12.17□□□□□ -0.46
CCDC90B-216ENST00000529856 ENO2P09104 434 aaPredicted RBP12.17□□□□□ -0.46
CCDC90B-216ENST00000529856 STMN1P16949 149 aa12.17□□□□□ -0.46
CCDC90B-216ENST00000529856 AP1S2P56377 157 aa12.17□□□□□ -0.46
CCDC90B-216ENST00000529856 NAA25Q14CX7 972 aa12.17□□□□□ -0.46
CCDC90B-216ENST00000529856 EFTUD2Q15029 972 aaKnown RBP eCLIP12.17□□□□□ -0.46
CCDC90B-216ENST00000529856 UBAP2Q5T6F2 1119 aaKnown RBP12.17□□□□□ -0.46
CCDC90B-216ENST00000529856 ICE2Q659A1 982 aa12.17□□□□□ -0.46
CCDC90B-216ENST00000529856 SBSNQ6UWP8 590 aa12.17□□□□□ -0.46
CCDC90B-216ENST00000529856 MBOAT1Q6ZNC8 495 aa12.17□□□□□ -0.46
CCDC90B-216ENST00000529856 GPR135Q8IZ08 494 aa12.17□□□□□ -0.46
CCDC90B-216ENST00000529856 KIAA1143Q96AT1 154 aaPredicted RBP12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms