RNA–Protein interactions for RNA: ENST00000528336.1

PCF11-202, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 5

Gene PCF11, Length 1,041 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-202ENST00000528336 LINC00696Q6ZRV3 163 aa5.53□□□□□ -1.52
PCF11-202ENST00000528336 LPCAT2Q7L5N7 544 aa5.53□□□□□ -1.52
PCF11-202ENST00000528336 ARID3BQ8IVW6 561 aaPredicted RBP5.53□□□□□ -1.52
PCF11-202ENST00000528336 TUSC5Q8IXB3 177 aa5.53□□□□□ -1.52
PCF11-202ENST00000528336 GCSAMQ8N6F7 178 aa5.53□□□□□ -1.52
PCF11-202ENST00000528336 PPP4R1Q8TF05 950 aa5.53□□□□□ -1.52
PCF11-202ENST00000528336 CTNNBL1Q8WYA6 563 aaPredicted RBP5.53□□□□□ -1.52
PCF11-202ENST00000528336 ZNF583Q96ND8 569 aa5.53□□□□□ -1.52
PCF11-202ENST00000528336 NODALQ96S42 347 aa5.53□□□□□ -1.52
PCF11-202ENST00000528336 DDOQ99489 341 aa5.53□□□□□ -1.52
PCF11-202ENST00000528336 GFI1Q99684 422 aa5.53□□□□□ -1.52
PCF11-202ENST00000528336 TCHPQ9BT92 498 aa5.53□□□□□ -1.52
PCF11-202ENST00000528336 C1QTNF1Q9BXJ1 281 aa5.53□□□□□ -1.52
PCF11-202ENST00000528336 FKRPQ9H9S5 495 aa5.53□□□□□ -1.52
PCF11-202ENST00000528336 IL1RAPL2Q9NP60 686 aa5.53□□□□□ -1.52
PCF11-202ENST00000528336 ANO10Q9NW15 660 aa5.53□□□□□ -1.52
PCF11-202ENST00000528336 NINJ2Q9NZG7 142 aa5.53□□□□□ -1.52
PCF11-202ENST00000528336 IL19Q9UHD0 177 aa5.53□□□□□ -1.52
PCF11-202ENST00000528336 ROCK2O75116 1388 aaKnown RBP5.53□□□□□ -1.52
PCF11-202ENST00000528336 DLC1Q96QB1 1528 aa5.53□□□□□ -1.52
PCF11-202ENST00000528336 GREB1LQ9C091 1923 aaPredicted RBP5.52□□□□□ -1.53
PCF11-202ENST00000528336 TRPM1Q7Z4N2 1603 aa5.52□□□□□ -1.53
PCF11-202ENST00000528336 IGSF1Q8N6C5 1336 aa5.52□□□□□ -1.53
PCF11-202ENST00000528336 RNF103-CHMP3A0A140T963 221 aa5.52□□□□□ -1.53
PCF11-202ENST00000528336 A8MV72 311 aaPredicted RBP5.52□□□□□ -1.53
PCF11-202ENST00000528336 RNF103O00237 685 aa5.52□□□□□ -1.53
PCF11-202ENST00000528336 DNM1LO00429 736 aa5.52□□□□□ -1.53
PCF11-202ENST00000528336 MCF2LO15068 1137 aa5.52□□□□□ -1.53
PCF11-202ENST00000528336 RTN2O75298 545 aa5.52□□□□□ -1.53
PCF11-202ENST00000528336 TPOP07202 933 aa5.52□□□□□ -1.53
PCF11-202ENST00000528336 TYMPP19971 482 aa5.52□□□□□ -1.53
PCF11-202ENST00000528336 ADSSP30520 456 aa5.52□□□□□ -1.53
PCF11-202ENST00000528336 SULT1E1P49888 294 aa5.52□□□□□ -1.53
PCF11-202ENST00000528336 HNMTP50135 292 aa5.52□□□□□ -1.53
PCF11-202ENST00000528336 MRPL12P52815 198 aaKnown RBP5.52□□□□□ -1.53
PCF11-202ENST00000528336 KCNC3Q14003 757 aa5.52□□□□□ -1.53
PCF11-202ENST00000528336 PDSS1Q5T2R2 415 aa5.52□□□□□ -1.53
PCF11-202ENST00000528336 SUSD1Q6UWL2 747 aa5.52□□□□□ -1.53
PCF11-202ENST00000528336 C15orf52Q6ZUT6 534 aaKnown RBP5.52□□□□□ -1.53
PCF11-202ENST00000528336 Q75L30 129 aa5.52□□□□□ -1.53
PCF11-202ENST00000528336 OTOAQ7RTW8 1153 aa5.52□□□□□ -1.53
PCF11-202ENST00000528336 CUZD1Q86UP6 607 aa5.52□□□□□ -1.53
PCF11-202ENST00000528336 DNAAF5Q86Y56 855 aa5.52□□□□□ -1.53
PCF11-202ENST00000528336 LINC00346Q8IVM7 164 aa5.52□□□□□ -1.53
PCF11-202ENST00000528336 CIARTQ8N365 385 aaPredicted RBP5.52□□□□□ -1.53
PCF11-202ENST00000528336 GBGT1Q8N5D6 347 aa5.52□□□□□ -1.53
PCF11-202ENST00000528336 METTL27Q8N6F8 245 aaPredicted RBP5.52□□□□□ -1.53
PCF11-202ENST00000528336 OR6J1Q8NGC5 347 aa5.52□□□□□ -1.53
PCF11-202ENST00000528336 ANKRD49Q8WVL7 239 aa5.52□□□□□ -1.53
PCF11-202ENST00000528336 PRPF31Q8WWY3 499 aaKnown RBP5.52□□□□□ -1.53
PCF11-202ENST00000528336 GCNAQ96QF7 691 aa5.52□□□□□ -1.53
PCF11-202ENST00000528336 TXN2Q99757 166 aa5.52□□□□□ -1.53
PCF11-202ENST00000528336 LRRC1Q9BTT6 524 aa5.52□□□□□ -1.53
PCF11-202ENST00000528336 SEMA6AQ9H2E6 1030 aa5.52□□□□□ -1.53
PCF11-202ENST00000528336 HRH4Q9H3N8 390 aa5.52□□□□□ -1.53
PCF11-202ENST00000528336 FAF1Q9UNN5 650 aaPredicted RBP5.52□□□□□ -1.53
PCF11-202ENST00000528336 TRIM17Q9Y577 477 aa5.52□□□□□ -1.53
PCF11-202ENST00000528336 PCDHGA5Q9Y5G8 931 aa5.52□□□□□ -1.53
PCF11-202ENST00000528336 TCF20Q9UGU0 1960 aaKnown RBP5.52□□□□□ -1.53
PCF11-202ENST00000528336 KNDC1Q76NI1 1749 aa5.51□□□□□ -1.53
PCF11-202ENST00000528336 DCCP43146 1447 aa5.51□□□□□ -1.53
PCF11-202ENST00000528336 ADGRL3Q9HAR2 1447 aa5.51□□□□□ -1.53
PCF11-202ENST00000528336 TRAV34A0A0B4J273 112 aa5.51□□□□□ -1.53
PCF11-202ENST00000528336 LRRD1A4D1F6 860 aa5.51□□□□□ -1.53
PCF11-202ENST00000528336 TMEM8BA6NDV4 472 aa5.51□□□□□ -1.53
PCF11-202ENST00000528336 URADA6NGE7 173 aa5.51□□□□□ -1.53
PCF11-202ENST00000528336 CDRT15L2A8MXV6 281 aa5.51□□□□□ -1.53
PCF11-202ENST00000528336 NEMFO60524 1076 aa5.51□□□□□ -1.53
PCF11-202ENST00000528336 TRIM16O95361 564 aa5.51□□□□□ -1.53
PCF11-202ENST00000528336 KRT19P08727 400 aa5.51□□□□□ -1.53
PCF11-202ENST00000528336 ASMTP46597 345 aa5.51□□□□□ -1.53
PCF11-202ENST00000528336 SUOXP51687 545 aa5.51□□□□□ -1.53
PCF11-202ENST00000528336 CTSCP53634 463 aa5.51□□□□□ -1.53
PCF11-202ENST00000528336 DMTNQ08495 405 aa5.51□□□□□ -1.53
PCF11-202ENST00000528336 MVPQ14764 893 aaKnown RBP5.51□□□□□ -1.53
PCF11-202ENST00000528336 RBBP5Q15291 538 aaKnown RBP5.51□□□□□ -1.53
PCF11-202ENST00000528336 CRY2Q49AN0 593 aa5.51□□□□□ -1.53
PCF11-202ENST00000528336 CAVIN4Q5BKX8 364 aa5.51□□□□□ -1.53
PCF11-202ENST00000528336 ZRANB3Q5FWF4 1079 aa5.51□□□□□ -1.53
PCF11-202ENST00000528336 SIRPB2Q5JXA9 342 aa5.51□□□□□ -1.53
PCF11-202ENST00000528336 CCDC183Q5T5S1 534 aa5.51□□□□□ -1.53
PCF11-202ENST00000528336 STPG1Q5TH74 334 aa5.51□□□□□ -1.53
PCF11-202ENST00000528336 ZDHHC20Q5W0Z9 365 aa5.51□□□□□ -1.53
PCF11-202ENST00000528336 OLFM4Q6UX06 510 aa5.51□□□□□ -1.53
PCF11-202ENST00000528336 TPRG1Q6ZUI0 275 aa5.51□□□□□ -1.53
PCF11-202ENST00000528336 ADCK1Q86TW2 530 aa5.51□□□□□ -1.53
PCF11-202ENST00000528336 C1orf52Q8N6N3 182 aaKnown RBP5.51□□□□□ -1.53
PCF11-202ENST00000528336 RTL3Q8N8U3 475 aaKnown RBP5.51□□□□□ -1.53
PCF11-202ENST00000528336 SYT2Q8N9I0 419 aaPredicted RBP5.51□□□□□ -1.53
PCF11-202ENST00000528336 RBM15BQ8NDT2 890 aaKnown RBP5.51□□□□□ -1.53
PCF11-202ENST00000528336 CNNM3Q8NE01 707 aa5.51□□□□□ -1.53
PCF11-202ENST00000528336 KIF18AQ8NI77 898 aa5.51□□□□□ -1.53
PCF11-202ENST00000528336 DNASE2BQ8WZ79 361 aa5.51□□□□□ -1.53
PCF11-202ENST00000528336 LRRC59Q96AG4 307 aaKnown RBP5.51□□□□□ -1.53
PCF11-202ENST00000528336 OXNAD1Q96HP4 312 aaPredicted RBP5.51□□□□□ -1.53
PCF11-202ENST00000528336 PRAM1Q96QH2 718 aa5.51□□□□□ -1.53
PCF11-202ENST00000528336 TRMT61BQ9BVS5 477 aaKnown RBP5.51□□□□□ -1.53
PCF11-202ENST00000528336 KLHL4Q9C0H6 718 aa5.51□□□□□ -1.53
PCF11-202ENST00000528336 TRPC7Q9HCX4 862 aa5.51□□□□□ -1.53
PCF11-202ENST00000528336 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms