RNA–Protein interactions for RNA: ENST00000527326.1

CD44-225, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 718 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-225ENST00000527326 PCDHB18PQ96TA0 734 aa5.68□□□□□ -1.5
CD44-225ENST00000527326 SDHCQ99643 169 aaPredicted RBP5.68□□□□□ -1.5
CD44-225ENST00000527326 NPAS2Q99743 824 aa5.68□□□□□ -1.5
CD44-225ENST00000527326 EIF2AK1Q9BQI3 630 aaKnown RBP5.68□□□□□ -1.5
CD44-225ENST00000527326 COPS4Q9BT78 406 aa5.68□□□□□ -1.5
CD44-225ENST00000527326 SLC25A23Q9BV35 468 aa5.68□□□□□ -1.5
CD44-225ENST00000527326 UGT2B28Q9BY64 529 aa5.68□□□□□ -1.5
CD44-225ENST00000527326 CCDC90BQ9GZT6 254 aa5.68□□□□□ -1.5
CD44-225ENST00000527326 TWSG1Q9GZX9 223 aa5.68□□□□□ -1.5
CD44-225ENST00000527326 ADAM19Q9H013 955 aa5.68□□□□□ -1.5
CD44-225ENST00000527326 BTBD1Q9H0C5 482 aa5.68□□□□□ -1.5
CD44-225ENST00000527326 OSGEPL1Q9H4B0 414 aa5.68□□□□□ -1.5
CD44-225ENST00000527326 PCIF1Q9H4Z3 704 aa5.68□□□□□ -1.5
CD44-225ENST00000527326 PIF1Q9H611 641 aa5.68□□□□□ -1.5
CD44-225ENST00000527326 ESRP2Q9H6T0 727 aaKnown RBP5.68□□□□□ -1.5
CD44-225ENST00000527326 TDRD3Q9H7E2 651 aaKnown RBP5.68□□□□□ -1.5
CD44-225ENST00000527326 SYNDIG1Q9H7V2 258 aa5.68□□□□□ -1.5
CD44-225ENST00000527326 C6orf50Q9HD87 102 aa5.68□□□□□ -1.5
CD44-225ENST00000527326 ITM2CQ9NQX7 267 aa5.68□□□□□ -1.5
CD44-225ENST00000527326 SMYD2Q9NRG4 433 aa5.68□□□□□ -1.5
CD44-225ENST00000527326 TBC1D22BQ9NU19 505 aa5.68□□□□□ -1.5
CD44-225ENST00000527326 SDHAF2Q9NX18 166 aa5.68□□□□□ -1.5
CD44-225ENST00000527326 IMPAD1Q9NX62 359 aa5.68□□□□□ -1.5
CD44-225ENST00000527326 THUMPD1Q9NXG2 353 aaKnown RBP5.68□□□□□ -1.5
CD44-225ENST00000527326 BARHL2Q9NY43 387 aa5.68□□□□□ -1.5
CD44-225ENST00000527326 CACNA2D2Q9NY47 1150 aa5.68□□□□□ -1.5
CD44-225ENST00000527326 SCN3BQ9NY72 215 aa5.68□□□□□ -1.5
CD44-225ENST00000527326 MORF4L1Q9UBU8 362 aa5.68□□□□□ -1.5
CD44-225ENST00000527326 EMCNQ9ULC0 261 aa5.68□□□□□ -1.5
CD44-225ENST00000527326 MAB21L2Q9Y586 359 aa5.68□□□□□ -1.5
CD44-225ENST00000527326 PIAS3Q9Y6X2 628 aa5.68□□□□□ -1.5
CD44-225ENST00000527326 SCN7AQ01118 1682 aa5.68□□□□□ -1.5
CD44-225ENST00000527326 IRS2Q9Y4H2 1338 aa5.68□□□□□ -1.5
CD44-225ENST00000527326 CDK5RAP2Q96SN8 1893 aa5.67□□□□□ -1.5
CD44-225ENST00000527326 KRTAP9-6A0A140TA67 174 aa5.67□□□□□ -1.5
CD44-225ENST00000527326 A0A1W2PPL8 197 aa5.67□□□□□ -1.5
CD44-225ENST00000527326 SLC22A23A1A5C7 686 aa5.67□□□□□ -1.5
CD44-225ENST00000527326 FAM159BA6NKW6 160 aa5.67□□□□□ -1.5
CD44-225ENST00000527326 EFCAB7A8K855 629 aa5.67□□□□□ -1.5
CD44-225ENST00000527326 A8MXK9 166 aa5.67□□□□□ -1.5
CD44-225ENST00000527326 TARM1B6A8C7 271 aa5.67□□□□□ -1.5
CD44-225ENST00000527326 CDC7O00311 574 aa5.67□□□□□ -1.5
CD44-225ENST00000527326 MRASO14807 208 aa5.67□□□□□ -1.5
CD44-225ENST00000527326 CHADO15335 359 aa5.67□□□□□ -1.5
CD44-225ENST00000527326 SLC31A2O15432 143 aa5.67□□□□□ -1.5
CD44-225ENST00000527326 ADAM12O43184 909 aa5.67□□□□□ -1.5
CD44-225ENST00000527326 SEC14L5O43304 696 aa5.67□□□□□ -1.5
CD44-225ENST00000527326 NRP2O60462 931 aa5.67□□□□□ -1.5
CD44-225ENST00000527326 BRINP1O60477 761 aa5.67□□□□□ -1.5
CD44-225ENST00000527326 ERN1O75460 977 aaKnown RBP5.67□□□□□ -1.5
CD44-225ENST00000527326 RPS6KA4O75676 772 aa5.67□□□□□ -1.5
CD44-225ENST00000527326 RASGRP1O95267 797 aa5.67□□□□□ -1.5
CD44-225ENST00000527326 IFNB1P01574 187 aa5.67□□□□□ -1.5
CD44-225ENST00000527326 IGHV2-70P01814 119 aa5.67□□□□□ -1.5
CD44-225ENST00000527326 C1QAP02745 245 aa5.67□□□□□ -1.5
CD44-225ENST00000527326 URODP06132 367 aa5.67□□□□□ -1.5
CD44-225ENST00000527326 RB1P06400 928 aa5.67□□□□□ -1.5
CD44-225ENST00000527326 ANXA6P08133 673 aa5.67□□□□□ -1.5
CD44-225ENST00000527326 SNRPB2P08579 225 aaKnown RBP5.67□□□□□ -1.5
CD44-225ENST00000527326 ZNF806P0C7X5 589 aa5.67□□□□□ -1.5
CD44-225ENST00000527326 SAGP10523 405 aaPredicted RBP5.67□□□□□ -1.5
CD44-225ENST00000527326 CKBP12277 381 aa5.67□□□□□ -1.5
CD44-225ENST00000527326 BMP3P12645 472 aa5.67□□□□□ -1.5
CD44-225ENST00000527326 ETS1P14921 441 aa5.67□□□□□ -1.5
CD44-225ENST00000527326 ACPPP15309 386 aa5.67□□□□□ -1.5
CD44-225ENST00000527326 GNSP15586 552 aa5.67□□□□□ -1.5
CD44-225ENST00000527326 CD36P16671 472 aa5.67□□□□□ -1.5
CD44-225ENST00000527326 IL7RP16871 459 aa5.67□□□□□ -1.5
CD44-225ENST00000527326 SPI1P17947 270 aa5.67□□□□□ -1.5
CD44-225ENST00000527326 CD72P21854 359 aa5.67□□□□□ -1.5
CD44-225ENST00000527326 WARSP23381 471 aaKnown RBP5.67□□□□□ -1.5
CD44-225ENST00000527326 POU1F1P28069 291 aa5.67□□□□□ -1.5
CD44-225ENST00000527326 CTNNB1P35222 781 aa5.67□□□□□ -1.5
CD44-225ENST00000527326 SPRP35270 261 aaPredicted RBP5.67□□□□□ -1.5
CD44-225ENST00000527326 TGFBR2P37173 567 aa5.67□□□□□ -1.5
CD44-225ENST00000527326 CD79BP40259 229 aa5.67□□□□□ -1.5
CD44-225ENST00000527326 CTSKP43235 329 aa5.67□□□□□ -1.5
CD44-225ENST00000527326 ATP5OP48047 213 aa5.67□□□□□ -1.5
CD44-225ENST00000527326 PREPP48147 710 aa5.67□□□□□ -1.5
CD44-225ENST00000527326 RARRES1P49788 294 aa5.67□□□□□ -1.5
CD44-225ENST00000527326 RPL14P50914 215 aaKnown RBP5.67□□□□□ -1.5
CD44-225ENST00000527326 ZNF143P52747 638 aaPredicted RBP5.67□□□□□ -1.5
CD44-225ENST00000527326 RIDAP52758 137 aaKnown RBP5.67□□□□□ -1.5
CD44-225ENST00000527326 ARSFP54793 590 aa5.67□□□□□ -1.5
CD44-225ENST00000527326 TAS2R60P59551 318 aa5.67□□□□□ -1.5
CD44-225ENST00000527326 KCNJ10P78508 379 aa5.67□□□□□ -1.5
CD44-225ENST00000527326 DEFA6Q01524 100 aa5.67□□□□□ -1.5
CD44-225ENST00000527326 FMO1Q01740 532 aa5.67□□□□□ -1.5
CD44-225ENST00000527326 SP2Q02086 613 aa5.67□□□□□ -1.5
CD44-225ENST00000527326 CSTF1Q05048 431 aaKnown RBP5.67□□□□□ -1.5
CD44-225ENST00000527326 FOXM1Q08050 763 aa5.67□□□□□ -1.5
CD44-225ENST00000527326 SPIRE1Q08AE8 756 aa5.67□□□□□ -1.5
CD44-225ENST00000527326 PRKG2Q13237 762 aa5.67□□□□□ -1.5
CD44-225ENST00000527326 EXOSC2Q13868 293 aaKnown RBP5.67□□□□□ -1.5
CD44-225ENST00000527326 BMPR2Q13873 1038 aa5.67□□□□□ -1.5
CD44-225ENST00000527326 PON3Q15166 354 aa5.67□□□□□ -1.5
CD44-225ENST00000527326 IMPG1Q17R60 797 aa5.67□□□□□ -1.5
CD44-225ENST00000527326 TMEM44Q2T9K0 475 aa5.67□□□□□ -1.5
CD44-225ENST00000527326 RFX4Q33E94 735 aa5.67□□□□□ -1.5
CD44-225ENST00000527326 LBHQ53QV2 105 aaPredicted RBP5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms