RNA–Protein interactions for RNA: ENST00000526548.3

PICALM-205, Transcript of phosphatidylinositol binding clathrin assembly protein, humanhuman

TSL 1 (best)

Gene PICALM, Length 738 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PICALM-205ENST00000526548 PLEKHA4Q9H4M7 779 aa4.3□□□□□ -1.72
PICALM-205ENST00000526548 SYNCQ9H7C4 482 aa4.3□□□□□ -1.72
PICALM-205ENST00000526548 ACTR5Q9H9F9 607 aaPredicted RBP4.3□□□□□ -1.72
PICALM-205ENST00000526548 ZNF556Q9HAH1 456 aa4.3□□□□□ -1.72
PICALM-205ENST00000526548 CSNK1G1Q9HCP0 422 aa4.3□□□□□ -1.72
PICALM-205ENST00000526548 EIF2B3Q9NR50 452 aaKnown RBP4.3□□□□□ -1.72
PICALM-205ENST00000526548 INTS9Q9NV88 658 aaKnown RBP4.3□□□□□ -1.72
PICALM-205ENST00000526548 MTMR10Q9NXD2 777 aa4.3□□□□□ -1.72
PICALM-205ENST00000526548 SNX9Q9Y5X1 595 aa4.3□□□□□ -1.72
PICALM-205ENST00000526548 TEX264Q9Y6I9 313 aa4.3□□□□□ -1.72
PICALM-205ENST00000526548 SRCAPQ6ZRS2 3230 aa4.3□□□□□ -1.72
PICALM-205ENST00000526548 ZNF638Q14966 1978 aaKnown RBP4.29□□□□□ -1.72
PICALM-205ENST00000526548 TMEM120BA0PK00 339 aa4.29□□□□□ -1.72
PICALM-205ENST00000526548 ARHGEF37A1IGU5 675 aa4.29□□□□□ -1.72
PICALM-205ENST00000526548 CCT8L1PA6NM43 557 aa4.29□□□□□ -1.72
PICALM-205ENST00000526548 A8MXQ7 604 aa4.29□□□□□ -1.72
PICALM-205ENST00000526548 GOLGA8SH3BPF8 625 aa4.29□□□□□ -1.72
PICALM-205ENST00000526548 STMND1H3BQB6 276 aa4.29□□□□□ -1.72
PICALM-205ENST00000526548 SGK1O00141 431 aa4.29□□□□□ -1.72
PICALM-205ENST00000526548 PTGESO14684 152 aa4.29□□□□□ -1.72
PICALM-205ENST00000526548 KLF11O14901 512 aa4.29□□□□□ -1.72
PICALM-205ENST00000526548 TM9SF1O15321 606 aa4.29□□□□□ -1.72
PICALM-205ENST00000526548 SEPT4O43236 478 aa4.29□□□□□ -1.72
PICALM-205ENST00000526548 SNX3O60493 162 aa4.29□□□□□ -1.72
PICALM-205ENST00000526548 HUS1O60921 280 aa4.29□□□□□ -1.72
PICALM-205ENST00000526548 CSDE1O75534 798 aaKnown RBP4.29□□□□□ -1.72
PICALM-205ENST00000526548 DAB1O75553 588 aa4.29□□□□□ -1.72
PICALM-205ENST00000526548 CABYRO75952 493 aa4.29□□□□□ -1.72
PICALM-205ENST00000526548 ACSL3O95573 720 aa4.29□□□□□ -1.72
PICALM-205ENST00000526548 F9P00740 461 aa4.29□□□□□ -1.72
PICALM-205ENST00000526548 CD48P09326 243 aa4.29□□□□□ -1.72
PICALM-205ENST00000526548 CYBAP13498 195 aa4.29□□□□□ -1.72
PICALM-205ENST00000526548 PRKCHP24723 683 aa4.29□□□□□ -1.72
PICALM-205ENST00000526548 CNTFP26441 200 aa4.29□□□□□ -1.72
PICALM-205ENST00000526548 HPDP32754 393 aaPredicted RBP4.29□□□□□ -1.72
PICALM-205ENST00000526548 SKIV2L2P42285 1042 aaKnown RBP4.29□□□□□ -1.72
PICALM-205ENST00000526548 SSR1P43307 286 aaKnown RBP4.29□□□□□ -1.72
PICALM-205ENST00000526548 CLCN5P51795 746 aa4.29□□□□□ -1.72
PICALM-205ENST00000526548 HUNKP57058 714 aa4.29□□□□□ -1.72
PICALM-205ENST00000526548 SLC8A3P57103 927 aa4.29□□□□□ -1.72
PICALM-205ENST00000526548 GEMIN4P57678 1058 aaKnown RBP4.29□□□□□ -1.72
PICALM-205ENST00000526548 GPX6P59796 221 aa4.29□□□□□ -1.72
PICALM-205ENST00000526548 ERVFC1-1P60608 527 aa4.29□□□□□ -1.72
PICALM-205ENST00000526548 YWHAZP63104 245 aaKnown RBP4.29□□□□□ -1.72
PICALM-205ENST00000526548 MRPS6P82932 125 aaKnown RBP4.29□□□□□ -1.72
PICALM-205ENST00000526548 ROR1Q01973 937 aa4.29□□□□□ -1.72
PICALM-205ENST00000526548 RNASELQ05823 741 aaKnown RBP4.29□□□□□ -1.72
PICALM-205ENST00000526548 SLC18A2Q05940 514 aa4.29□□□□□ -1.72
PICALM-205ENST00000526548 CDK18Q07002 472 aa4.29□□□□□ -1.72
PICALM-205ENST00000526548 ACTN3Q08043 901 aaPredicted RBP4.29□□□□□ -1.72
PICALM-205ENST00000526548 SREBF2Q12772 1141 aa4.29□□□□□ -1.72
PICALM-205ENST00000526548 PAFAH1B3Q15102 231 aaKnown RBP4.29□□□□□ -1.72
PICALM-205ENST00000526548 LONRF1Q17RB8 773 aa4.29□□□□□ -1.72
PICALM-205ENST00000526548 GALNTL6Q49A17 601 aa4.29□□□□□ -1.72
PICALM-205ENST00000526548 SLC45A4Q5BKX6 768 aa4.29□□□□□ -1.72
PICALM-205ENST00000526548 FSCBQ5H9T9 825 aa4.29□□□□□ -1.72
PICALM-205ENST00000526548 PM20D1Q6GTS8 502 aa4.29□□□□□ -1.72
PICALM-205ENST00000526548 OR6B2Q6IFH4 312 aa4.29□□□□□ -1.72
PICALM-205ENST00000526548 RGMBQ6NW40 437 aa4.29□□□□□ -1.72
PICALM-205ENST00000526548 FAM171BQ6P995 826 aa4.29□□□□□ -1.72
PICALM-205ENST00000526548 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.29□□□□□ -1.72
PICALM-205ENST00000526548 PAQR9Q6ZVX9 377 aa4.29□□□□□ -1.72
PICALM-205ENST00000526548 CPLX4Q7Z7G2 160 aa4.29□□□□□ -1.72
PICALM-205ENST00000526548 PHLDB2Q86SQ0 1253 aa4.29□□□□□ -1.72
PICALM-205ENST00000526548 ACOT1Q86TX2 421 aa4.29□□□□□ -1.72
PICALM-205ENST00000526548 IGFN1Q86VF2 1251 aa4.29□□□□□ -1.72
PICALM-205ENST00000526548 FAM228AQ86W67 206 aa4.29□□□□□ -1.72
PICALM-205ENST00000526548 KLBQ86Z14 1044 aa4.29□□□□□ -1.72
PICALM-205ENST00000526548 UNC45BQ8IWX7 931 aa4.29□□□□□ -1.72
PICALM-205ENST00000526548 CACNA2D3Q8IZS8 1091 aa4.29□□□□□ -1.72
PICALM-205ENST00000526548 CLIP4Q8N3C7 705 aa4.29□□□□□ -1.72
PICALM-205ENST00000526548 EMC1Q8N766 993 aa4.29□□□□□ -1.72
PICALM-205ENST00000526548 C12orf29Q8N999 325 aa4.29□□□□□ -1.72
PICALM-205ENST00000526548 KLHDC9Q8NEP7 349 aa4.29□□□□□ -1.72
PICALM-205ENST00000526548 PJA1Q8NG27 643 aa4.29□□□□□ -1.72
PICALM-205ENST00000526548 FAM110DQ8TAY7 271 aaPredicted RBP4.29□□□□□ -1.72
PICALM-205ENST00000526548 UBA3Q8TBC4 463 aa4.29□□□□□ -1.72
PICALM-205ENST00000526548 FAM172AQ8WUF8 416 aa4.29□□□□□ -1.72
PICALM-205ENST00000526548 WDR60Q8WVS4 1066 aa4.29□□□□□ -1.72
PICALM-205ENST00000526548 DNAJB3Q8WWF6 145 aa4.29□□□□□ -1.72
PICALM-205ENST00000526548 SLC44A1Q8WWI5 657 aa4.29□□□□□ -1.72
PICALM-205ENST00000526548 RSPH1Q8WYR4 309 aa4.29□□□□□ -1.72
PICALM-205ENST00000526548 CABS1Q96KC9 395 aa4.29□□□□□ -1.72
PICALM-205ENST00000526548 QKIQ96PU8 341 aaKnown RBP eCLIP4.29□□□□□ -1.721e-12■■■□□ 16.5
PICALM-205ENST00000526548 CYTH2Q99418 400 aa4.29□□□□□ -1.72
PICALM-205ENST00000526548 ACBD6Q9BR61 282 aa4.29□□□□□ -1.72
PICALM-205ENST00000526548 NAT9Q9BTE0 207 aa4.29□□□□□ -1.72
PICALM-205ENST00000526548 MECRQ9BV79 373 aa4.29□□□□□ -1.72
PICALM-205ENST00000526548 TRIM62Q9BVG3 475 aa4.29□□□□□ -1.72
PICALM-205ENST00000526548 SORBS1Q9BX66 1292 aaKnown RBP4.29□□□□□ -1.72
PICALM-205ENST00000526548 MAK16Q9BXY0 300 aaKnown RBP4.29□□□□□ -1.72
PICALM-205ENST00000526548 TRIM6Q9C030 488 aaPredicted RBP4.29□□□□□ -1.72
PICALM-205ENST00000526548 NSRP1Q9H0G5 558 aaKnown RBP4.29□□□□□ -1.72
PICALM-205ENST00000526548 CXCL16Q9H2A7 254 aa4.29□□□□□ -1.72
PICALM-205ENST00000526548 SNX25Q9H3E2 840 aa4.29□□□□□ -1.72
PICALM-205ENST00000526548 CENPHQ9H3R5 247 aa4.29□□□□□ -1.72
PICALM-205ENST00000526548 NXF3Q9H4D5 531 aaKnown RBP4.29□□□□□ -1.72
PICALM-205ENST00000526548 CATSPERBQ9H7T0 1116 aa4.29□□□□□ -1.72
PICALM-205ENST00000526548 XAB2Q9HCS7 855 aaKnown RBP4.29□□□□□ -1.72
PICALM-205ENST00000526548 SAYSD1Q9NPB0 183 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms