RNA–Protein interactions for RNA: ENST00000526000.5

CD44-221, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 722 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-221ENST00000526000 CCR7P32248 378 aa6.29□□□□□ -1.4
CD44-221ENST00000526000 PTPN7P35236 360 aa6.29□□□□□ -1.4
CD44-221ENST00000526000 GRIA1P42261 906 aa6.29□□□□□ -1.4
CD44-221ENST00000526000 NSG1P42857 185 aa6.29□□□□□ -1.4
CD44-221ENST00000526000 TSFMP43897 325 aaKnown RBP6.29□□□□□ -1.4
CD44-221ENST00000526000 ARSFP54793 590 aa6.29□□□□□ -1.4
CD44-221ENST00000526000 RWDD2BP57060 319 aa6.29□□□□□ -1.4
CD44-221ENST00000526000 PMP22Q01453 160 aa6.29□□□□□ -1.4
CD44-221ENST00000526000 KLC1Q07866 573 aa6.29□□□□□ -1.4
CD44-221ENST00000526000 KIR2DS3Q14952 304 aa6.29□□□□□ -1.4
CD44-221ENST00000526000 TLR1Q15399 786 aa6.29□□□□□ -1.4
CD44-221ENST00000526000 KCTD19Q17RG1 926 aaPredicted RBP6.29□□□□□ -1.4
CD44-221ENST00000526000 SLC5A12Q1EHB4 618 aa6.29□□□□□ -1.4
CD44-221ENST00000526000 PARP6Q2NL67 630 aa6.29□□□□□ -1.4
CD44-221ENST00000526000 FRMPD2BQ6IN97 320 aa6.29□□□□□ -1.4
CD44-221ENST00000526000 MRGPRGQ86SM5 289 aa6.29□□□□□ -1.4
CD44-221ENST00000526000 BCORP1Q8N888 145 aa6.29□□□□□ -1.4
CD44-221ENST00000526000 TTC29Q8NA56 475 aaPredicted RBP6.29□□□□□ -1.4
CD44-221ENST00000526000 OR6P1Q8NGX9 317 aa6.29□□□□□ -1.4
CD44-221ENST00000526000 OR5K2Q8NHB8 316 aa6.29□□□□□ -1.4
CD44-221ENST00000526000 STT3BQ8TCJ2 826 aa6.29□□□□□ -1.4
CD44-221ENST00000526000 BRIX1Q8TDN6 353 aaKnown RBP6.29□□□□□ -1.4
CD44-221ENST00000526000 PPP4R1Q8TF05 950 aa6.29□□□□□ -1.4
CD44-221ENST00000526000 STYXQ8WUJ0 223 aa6.29□□□□□ -1.4
CD44-221ENST00000526000 DLG3Q92796 817 aa6.29□□□□□ -1.4
CD44-221ENST00000526000 MIEF2Q96C03 454 aa6.29□□□□□ -1.4
CD44-221ENST00000526000 HES6Q96HZ4 224 aa6.29□□□□□ -1.4
CD44-221ENST00000526000 SPATA13Q96N96 652 aa6.29□□□□□ -1.4
CD44-221ENST00000526000 SPSB2Q99619 263 aa6.29□□□□□ -1.4
CD44-221ENST00000526000 SELENOSQ9BQE4 189 aa6.29□□□□□ -1.4
CD44-221ENST00000526000 FERMT1Q9BQL6 677 aa6.29□□□□□ -1.4
CD44-221ENST00000526000 ACAT2Q9BWD1 397 aa6.29□□□□□ -1.4
CD44-221ENST00000526000 LZTFL1Q9NQ48 299 aa6.29□□□□□ -1.4
CD44-221ENST00000526000 OR6C2Q9NZP2 312 aa6.29□□□□□ -1.4
CD44-221ENST00000526000 RUVBL2Q9Y230 463 aaKnown RBP6.29□□□□□ -1.4
CD44-221ENST00000526000 R3HDM2Q9Y2K5 976 aaKnown RBP6.29□□□□□ -1.4
CD44-221ENST00000526000 PCDHA3Q9Y5H8 950 aa6.29□□□□□ -1.4
CD44-221ENST00000526000 DUSP10Q9Y6W6 482 aa6.29□□□□□ -1.4
CD44-221ENST00000526000 ABCA12Q86UK0 2595 aa6.29□□□□□ -1.4
CD44-221ENST00000526000 DOPEY1Q5JWR5 2465 aa6.28□□□□□ -1.4
CD44-221ENST00000526000 NSG1A0A0A6YYJ2 146 aa6.28□□□□□ -1.4
CD44-221ENST00000526000 IGHV3-20A0A0C4DH32 117 aa6.28□□□□□ -1.4
CD44-221ENST00000526000 DYTNA2CJ06 578 aa6.28□□□□□ -1.4
CD44-221ENST00000526000 HYKKA2RU49 373 aa6.28□□□□□ -1.4
CD44-221ENST00000526000 OR2W5A6NFC9 320 aa6.28□□□□□ -1.4
CD44-221ENST00000526000 FAM227AF5H4B4 570 aa6.28□□□□□ -1.4
CD44-221ENST00000526000 MAP2K7O14733 419 aa6.28□□□□□ -1.4
CD44-221ENST00000526000 DIAPH2O60879 1101 aa6.28□□□□□ -1.4
CD44-221ENST00000526000 AP2A2O94973 939 aa6.28□□□□□ -1.4
CD44-221ENST00000526000 STSP08842 583 aa6.28□□□□□ -1.4
CD44-221ENST00000526000 ZGLP1P0C6A0 271 aa6.28□□□□□ -1.4
CD44-221ENST00000526000 ACPPP15309 386 aa6.28□□□□□ -1.4
CD44-221ENST00000526000 MST1P26927 711 aa6.28□□□□□ -1.4
CD44-221ENST00000526000 HTR1EP28566 365 aa6.28□□□□□ -1.4
CD44-221ENST00000526000 FOXN2P32314 431 aa6.28□□□□□ -1.4
CD44-221ENST00000526000 BDKRB1P46663 353 aa6.28□□□□□ -1.4
CD44-221ENST00000526000 RAB28P51157 221 aa6.28□□□□□ -1.4
CD44-221ENST00000526000 EMP2P54851 167 aa6.28□□□□□ -1.4
CD44-221ENST00000526000 GDF10P55107 478 aa6.28□□□□□ -1.4
CD44-221ENST00000526000 OCA2Q04671 838 aa6.28□□□□□ -1.4
CD44-221ENST00000526000 MFAP5Q13361 173 aa6.28□□□□□ -1.4
CD44-221ENST00000526000 FASTKQ14296 549 aaKnown RBP6.28□□□□□ -1.4
CD44-221ENST00000526000 GRB7Q14451 532 aa6.28□□□□□ -1.4
CD44-221ENST00000526000 SEMA3AQ14563 771 aa6.28□□□□□ -1.4
CD44-221ENST00000526000 GRM7Q14831 915 aa6.28□□□□□ -1.4
CD44-221ENST00000526000 RPS6KA1Q15418 735 aa6.28□□□□□ -1.4
CD44-221ENST00000526000 SYT16Q17RD7 645 aa6.28□□□□□ -1.4
CD44-221ENST00000526000 ZXDCQ2QGD7 858 aaPredicted RBP6.28□□□□□ -1.4
CD44-221ENST00000526000 ZC3H12BQ5HYM0 836 aaKnown RBP6.28□□□□□ -1.4
CD44-221ENST00000526000 MEI1Q5TIA1 1274 aa6.28□□□□□ -1.4
CD44-221ENST00000526000 FCRLBQ6BAA4 426 aa6.28□□□□□ -1.4
CD44-221ENST00000526000 FBXO42Q6P3S6 717 aa6.28□□□□□ -1.4
CD44-221ENST00000526000 IGFL2Q6UWQ7 119 aa6.28□□□□□ -1.4
CD44-221ENST00000526000 TMEM207Q6UWW9 146 aa6.28□□□□□ -1.4
CD44-221ENST00000526000 NCCRP1Q6ZVX7 275 aaPredicted RBP6.28□□□□□ -1.4
CD44-221ENST00000526000 KBTBD2Q8IY47 623 aa6.28□□□□□ -1.4
CD44-221ENST00000526000 SHISA5Q8N114 240 aa6.28□□□□□ -1.4
CD44-221ENST00000526000 DNAAF3Q8N9W5 541 aa6.28□□□□□ -1.4
CD44-221ENST00000526000 MAIP1Q8WWC4 291 aa6.28□□□□□ -1.4
CD44-221ENST00000526000 ITLN2Q8WWU7 325 aaPredicted RBP6.28□□□□□ -1.4
CD44-221ENST00000526000 FAM136AQ96C01 138 aa6.28□□□□□ -1.4
CD44-221ENST00000526000 PBKQ96KB5 322 aa6.28□□□□□ -1.4
CD44-221ENST00000526000 ZNF778Q96MU6 729 aa6.28□□□□□ -1.4
CD44-221ENST00000526000 LMF1Q96S06 567 aa6.28□□□□□ -1.4
CD44-221ENST00000526000 NAP1L3Q99457 506 aaPredicted RBP6.28□□□□□ -1.4
CD44-221ENST00000526000 FRMD8P1Q9BZ68 369 aaPredicted RBP6.28□□□□□ -1.4
CD44-221ENST00000526000 TSPAN10Q9H1Z9 355 aaPredicted RBP6.28□□□□□ -1.4
CD44-221ENST00000526000 RUBCNLQ9H714 662 aa6.28□□□□□ -1.4
CD44-221ENST00000526000 ARNT2Q9HBZ2 717 aa6.28□□□□□ -1.4
CD44-221ENST00000526000 ZNF304Q9HCX3 659 aa6.28□□□□□ -1.4
CD44-221ENST00000526000 TRPC4Q9UBN4 977 aa6.28□□□□□ -1.4
CD44-221ENST00000526000 TTC7AQ9ULT0 858 aaPredicted RBP6.28□□□□□ -1.4
CD44-221ENST00000526000 PYCARDQ9ULZ3 195 aa6.28□□□□□ -1.4
CD44-221ENST00000526000 PACSIN2Q9UNF0 486 aaPredicted RBP6.28□□□□□ -1.4
CD44-221ENST00000526000 NFS1Q9Y697 457 aa6.28□□□□□ -1.4
CD44-221ENST00000526000 CAPN6Q9Y6Q1 641 aa6.28□□□□□ -1.4
CD44-221ENST00000526000 POLQO75417 2590 aa6.28□□□□□ -1.4
CD44-221ENST00000526000 ANKRD12Q6UB98 2062 aa6.27□□□□□ -1.41
CD44-221ENST00000526000 PRRC2CQ9Y520 2896 aaKnown RBP6.27□□□□□ -1.41
CD44-221ENST00000526000 TCRBV7S2A1N4TA0A589 114 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms