RNA–Protein interactions for RNA: ENST00000524927.1

NEDD8-203, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2 BASIC

Gene NEDD8, Length 653 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-203ENST00000524927 TAF8Q7Z7C8 310 aa6.77□□□□□ -1.33
NEDD8-203ENST00000524927 CIARTQ8N365 385 aaPredicted RBP6.77□□□□□ -1.33
NEDD8-203ENST00000524927 HJURPQ8NCD3 748 aaPredicted RBP6.77□□□□□ -1.33
NEDD8-203ENST00000524927 TOR1AIP2Q8NFQ8 470 aa6.77□□□□□ -1.33
NEDD8-203ENST00000524927 ADAMTS18Q8TE60 1221 aa6.77□□□□□ -1.33
NEDD8-203ENST00000524927 PPP4R1Q8TF05 950 aa6.77□□□□□ -1.33
NEDD8-203ENST00000524927 ABHD5Q8WTS1 349 aa6.77□□□□□ -1.33
NEDD8-203ENST00000524927 TSACCQ96A04 125 aaPredicted RBP6.77□□□□□ -1.33
NEDD8-203ENST00000524927 ARHGEF38Q9NXL2 777 aa6.77□□□□□ -1.33
NEDD8-203ENST00000524927 LARSQ9P2J5 1176 aaKnown RBP6.77□□□□□ -1.33
NEDD8-203ENST00000524927 DTNAQ9Y4J8 743 aa6.77□□□□□ -1.33
NEDD8-203ENST00000524927 STYXL1Q9Y6J8 313 aa6.77□□□□□ -1.33
NEDD8-203ENST00000524927 TYW5A2RUC4 315 aaKnown RBP6.76□□□□□ -1.33
NEDD8-203ENST00000524927 IGLON5A6NGN9 336 aa6.76□□□□□ -1.33
NEDD8-203ENST00000524927 A8MU76 341 aa6.76□□□□□ -1.33
NEDD8-203ENST00000524927 ZSCAN9O15535 394 aaPredicted RBP6.76□□□□□ -1.33
NEDD8-203ENST00000524927 BEST1O76090 585 aa6.76□□□□□ -1.33
NEDD8-203ENST00000524927 VIPP01282 170 aa6.76□□□□□ -1.33
NEDD8-203ENST00000524927 TNFP01375 233 aa6.76□□□□□ -1.33
NEDD8-203ENST00000524927 RAF1P04049 648 aa6.76□□□□□ -1.33
NEDD8-203ENST00000524927 CTSLP07711 333 aa6.76□□□□□ -1.33
NEDD8-203ENST00000524927 TRIM49P0CI25 452 aa6.76□□□□□ -1.33
NEDD8-203ENST00000524927 TRIM49CP0CI26 452 aa6.76□□□□□ -1.33
NEDD8-203ENST00000524927 HSD3B1P14060 373 aa6.76□□□□□ -1.33
NEDD8-203ENST00000524927 ZFP36P26651 326 aaKnown RBP6.76□□□□□ -1.33
NEDD8-203ENST00000524927 ALDH18A1P54886 795 aaKnown RBP6.76□□□□□ -1.33
NEDD8-203ENST00000524927 MAP3K7CLP57077 242 aa6.76□□□□□ -1.33
NEDD8-203ENST00000524927 RPS18P62269 152 aaKnown RBP6.76□□□□□ -1.33
NEDD8-203ENST00000524927 RBPJQ06330 500 aa6.76□□□□□ -1.33
NEDD8-203ENST00000524927 IL11RAQ14626 422 aa6.76□□□□□ -1.33
NEDD8-203ENST00000524927 SYCP1Q15431 976 aa6.76□□□□□ -1.33
NEDD8-203ENST00000524927 KYNUQ16719 465 aa6.76□□□□□ -1.33
NEDD8-203ENST00000524927 FSCBQ5H9T9 825 aa6.76□□□□□ -1.33
NEDD8-203ENST00000524927 RPUSD3Q6P087 351 aaKnown RBP6.76□□□□□ -1.33
NEDD8-203ENST00000524927 WDR74Q6RFH5 385 aaPredicted RBP6.76□□□□□ -1.33
NEDD8-203ENST00000524927 IZUMO1Q8IYV9 350 aa6.76□□□□□ -1.33
NEDD8-203ENST00000524927 NR4A3Q92570 626 aa6.76□□□□□ -1.33
NEDD8-203ENST00000524927 PPP1R16AQ96I34 528 aa6.76□□□□□ -1.33
NEDD8-203ENST00000524927 TCEANC2Q96MN5 208 aa6.76□□□□□ -1.33
NEDD8-203ENST00000524927 FAM167BQ9BTA0 163 aa6.76□□□□□ -1.33
NEDD8-203ENST00000524927 GLOD4Q9HC38 313 aa6.76□□□□□ -1.33
NEDD8-203ENST00000524927 LNPEPQ9UIQ6 1025 aa6.76□□□□□ -1.33
NEDD8-203ENST00000524927 HBS1LQ9Y450 684 aaKnown RBP6.76□□□□□ -1.33
NEDD8-203ENST00000524927 FADS3Q9Y5Q0 445 aa6.76□□□□□ -1.33
NEDD8-203ENST00000524927 CYP46A1Q9Y6A2 500 aa6.76□□□□□ -1.33
NEDD8-203ENST00000524927 INTS1Q8N201 2190 aaKnown RBP6.75□□□□□ -1.33
NEDD8-203ENST00000524927 HHLA1C9JL84 531 aa6.75□□□□□ -1.33
NEDD8-203ENST00000524927 ARHGEF9O43307 516 aa6.75□□□□□ -1.33
NEDD8-203ENST00000524927 TMEM191BP0C7N4 346 aa6.75□□□□□ -1.33
NEDD8-203ENST00000524927 ITGAMP11215 1152 aa6.75□□□□□ -1.33
NEDD8-203ENST00000524927 ADRB3P13945 408 aa6.75□□□□□ -1.33
NEDD8-203ENST00000524927 CHRNA3P32297 505 aa6.75□□□□□ -1.33
NEDD8-203ENST00000524927 ABCD1P33897 745 aa6.75□□□□□ -1.33
NEDD8-203ENST00000524927 ACVRL1P37023 503 aa6.75□□□□□ -1.33
NEDD8-203ENST00000524927 CCT6AP40227 531 aaKnown RBP6.75□□□□□ -1.33
NEDD8-203ENST00000524927 ARCN1P48444 511 aaKnown RBP6.75□□□□□ -1.33
NEDD8-203ENST00000524927 HMGA2P52926 109 aa6.75□□□□□ -1.33
NEDD8-203ENST00000524927 MAZP56270 477 aaKnown RBP6.75□□□□□ -1.33
NEDD8-203ENST00000524927 MYBPHQ13203 477 aa6.75□□□□□ -1.33
NEDD8-203ENST00000524927 SLC12A1Q13621 1099 aa6.75□□□□□ -1.33
NEDD8-203ENST00000524927 ATP1A4Q13733 1029 aa6.75□□□□□ -1.33
NEDD8-203ENST00000524927 TRIM29Q14134 588 aa6.75□□□□□ -1.33
NEDD8-203ENST00000524927 ZNF169Q14929 603 aaPredicted RBP6.75□□□□□ -1.33
NEDD8-203ENST00000524927 TAF5Q15542 800 aa6.75□□□□□ -1.33
NEDD8-203ENST00000524927 DLG2Q15700 870 aa6.75□□□□□ -1.33
NEDD8-203ENST00000524927 ACCSLQ4AC99 568 aa6.75□□□□□ -1.33
NEDD8-203ENST00000524927 EARS2Q5JPH6 523 aaKnown RBP6.75□□□□□ -1.33
NEDD8-203ENST00000524927 SLC9A4Q6AI14 798 aa6.75□□□□□ -1.33
NEDD8-203ENST00000524927 ABLIM2Q6H8Q1 611 aa6.75□□□□□ -1.33
NEDD8-203ENST00000524927 MMS22LQ6ZRQ5 1243 aa6.75□□□□□ -1.33
NEDD8-203ENST00000524927 RFX8Q6ZV50 586 aa6.75□□□□□ -1.33
NEDD8-203ENST00000524927 BRSK2Q8IWQ3 736 aa6.75□□□□□ -1.33
NEDD8-203ENST00000524927 APCDD1Q8J025 514 aa6.75□□□□□ -1.33
NEDD8-203ENST00000524927 ARHGAP18Q8N392 663 aa6.75□□□□□ -1.33
NEDD8-203ENST00000524927 CARNMT1Q8N4J0 409 aa6.75□□□□□ -1.33
NEDD8-203ENST00000524927 C11orf44Q8N8P7 122 aa6.75□□□□□ -1.33
NEDD8-203ENST00000524927 DNAAF3Q8N9W5 541 aa6.75□□□□□ -1.33
NEDD8-203ENST00000524927 CA5BP1Q8WTZ4 195 aa6.75□□□□□ -1.33
NEDD8-203ENST00000524927 EID2BQ96D98 161 aa6.75□□□□□ -1.33
NEDD8-203ENST00000524927 ZDHHC12Q96GR4 267 aa6.75□□□□□ -1.33
NEDD8-203ENST00000524927 RUFY1Q96T51 708 aa6.75□□□□□ -1.33
NEDD8-203ENST00000524927 C1QTNF7Q9BXJ2 289 aa6.75□□□□□ -1.33
NEDD8-203ENST00000524927 MTMR12Q9C0I1 747 aa6.75□□□□□ -1.33
NEDD8-203ENST00000524927 IKZF4Q9H2S9 585 aa6.75□□□□□ -1.33
NEDD8-203ENST00000524927 DDX19AQ9NUU7 478 aaKnown RBP6.75□□□□□ -1.33
NEDD8-203ENST00000524927 ARMCX1Q9P291 453 aa6.75□□□□□ -1.33
NEDD8-203ENST00000524927 DKK2Q9UBU2 259 aa6.75□□□□□ -1.33
NEDD8-203ENST00000524927 KLQ9UEF7 1012 aa6.75□□□□□ -1.33
NEDD8-203ENST00000524927 SH3BGRL2Q9UJC5 107 aa6.75□□□□□ -1.33
NEDD8-203ENST00000524927 GTF2A1LQ9UNN4 478 aa6.75□□□□□ -1.33
NEDD8-203ENST00000524927 FARSAQ9Y285 508 aaKnown RBP6.75□□□□□ -1.33
NEDD8-203ENST00000524927 GPR52Q9Y2T5 361 aa6.75□□□□□ -1.33
NEDD8-203ENST00000524927 TSC22D4Q9Y3Q8 395 aa6.75□□□□□ -1.33
NEDD8-203ENST00000524927 HS3ST4Q9Y661 456 aa6.75□□□□□ -1.33
NEDD8-203ENST00000524927 ANKRD63C9JTQ0 380 aa6.74□□□□□ -1.33
NEDD8-203ENST00000524927 CLIC2O15247 247 aa6.74□□□□□ -1.33
NEDD8-203ENST00000524927 DNPH1O43598 174 aa6.74□□□□□ -1.33
NEDD8-203ENST00000524927 SLCO2B1O94956 709 aa6.74□□□□□ -1.33
NEDD8-203ENST00000524927 HOXD4P09016 255 aaPredicted RBP6.74□□□□□ -1.33
NEDD8-203ENST00000524927 ANKRD34CP0C6C1 535 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms