RNA–Protein interactions for RNA: ENST00000522121.5

TOP1MT-216, Transcript of DNA topoisomerase I mitochondrial, humanhuman

TSL 3

Gene TOP1MT, Length 874 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1MT-216ENST00000522121 TTC27Q6P3X3 843 aa17.69■□□□□ 0.42
TOP1MT-216ENST00000522121 CLEC18BQ6UXF7 455 aa17.69■□□□□ 0.42
TOP1MT-216ENST00000522121 CAND1Q86VP6 1230 aaKnown RBP17.69■□□□□ 0.42
TOP1MT-216ENST00000522121 RASGEF1CQ8N431 466 aa17.69■□□□□ 0.42
TOP1MT-216ENST00000522121 CLEC18CQ8NCF0 446 aa17.69■□□□□ 0.42
TOP1MT-216ENST00000522121 OR2L3Q8NG85 312 aa17.69■□□□□ 0.42
TOP1MT-216ENST00000522121 OR2A1Q8NGT9 310 aa17.69■□□□□ 0.42
TOP1MT-216ENST00000522121 PNPLA2Q96AD5 504 aa17.69■□□□□ 0.42
TOP1MT-216ENST00000522121 ZNF285Q96NJ3 590 aa17.69■□□□□ 0.42
TOP1MT-216ENST00000522121 ATP13A2Q9NQ11 1180 aa17.69■□□□□ 0.42
TOP1MT-216ENST00000522121 ENAMQ9NRM1 1142 aa17.69■□□□□ 0.42
TOP1MT-216ENST00000522121 SLC22A11Q9NSA0 550 aa17.69■□□□□ 0.42
TOP1MT-216ENST00000522121 NXT1Q9UKK6 140 aaKnown RBP17.69■□□□□ 0.42
TOP1MT-216ENST00000522121 KLK4Q9Y5K2 254 aa17.69■□□□□ 0.42
TOP1MT-216ENST00000522121 CTAGE9A4FU28 777 aa17.68■□□□□ 0.42
TOP1MT-216ENST00000522121 FITM1A5D6W6 292 aa17.68■□□□□ 0.42
TOP1MT-216ENST00000522121 AGPSO00116 658 aa17.68■□□□□ 0.42
TOP1MT-216ENST00000522121 CTSVO60911 334 aa17.68■□□□□ 0.42
TOP1MT-216ENST00000522121 IPO13O94829 963 aaKnown RBP17.68■□□□□ 0.42
TOP1MT-216ENST00000522121 ONECUT2O95948 504 aa17.68■□□□□ 0.42
TOP1MT-216ENST00000522121 MMP11P24347 488 aa17.68■□□□□ 0.42
TOP1MT-216ENST00000522121 MCM3P25205 808 aa17.68■□□□□ 0.42
TOP1MT-216ENST00000522121 CMPK1P30085 196 aa17.68■□□□□ 0.42
TOP1MT-216ENST00000522121 INPP5JQ15735 1006 aaPredicted RBP17.68■□□□□ 0.42
TOP1MT-216ENST00000522121 TTLL9Q3SXZ7 439 aa17.68■□□□□ 0.42
TOP1MT-216ENST00000522121 WASHC2DQ5SRD0 308 aa17.68■□□□□ 0.42
TOP1MT-216ENST00000522121 ANKRD22Q5VYY1 191 aa17.68■□□□□ 0.42
TOP1MT-216ENST00000522121 SLC6A19Q695T7 634 aa17.68■□□□□ 0.42
TOP1MT-216ENST00000522121 ZNF470Q6ECI4 717 aa17.68■□□□□ 0.42
TOP1MT-216ENST00000522121 CENPUQ71F23 418 aa17.68■□□□□ 0.42
TOP1MT-216ENST00000522121 PPP1R32Q7Z5V6 425 aa17.68■□□□□ 0.42
TOP1MT-216ENST00000522121 RBMXL3Q8N7X1 1067 aaKnown RBP17.68■□□□□ 0.42
TOP1MT-216ENST00000522121 MCUQ8NE86 351 aa17.68■□□□□ 0.42
TOP1MT-216ENST00000522121 OR9A1PQ8NGU1 263 aa17.68■□□□□ 0.42
TOP1MT-216ENST00000522121 TM9SF4Q92544 642 aa17.68■□□□□ 0.42
TOP1MT-216ENST00000522121 ZNF669Q96BR6 464 aaPredicted RBP17.68■□□□□ 0.42
TOP1MT-216ENST00000522121 SLC26A1Q9H2B4 701 aa17.68■□□□□ 0.42
TOP1MT-216ENST00000522121 CCDC68Q9H2F9 335 aa17.68■□□□□ 0.42
TOP1MT-216ENST00000522121 MAP10Q9P2G4 905 aa17.68■□□□□ 0.42
TOP1MT-216ENST00000522121 CDC23Q9UJX2 597 aa17.68■□□□□ 0.42
TOP1MT-216ENST00000522121 TNRC6AQ8NDV7 1962 aaKnown RBP17.68■□□□□ 0.42
TOP1MT-216ENST00000522121 KRT87PA6NCN2 255 aa17.67■□□□□ 0.42
TOP1MT-216ENST00000522121 ZNF839A8K0R7 811 aa17.67■□□□□ 0.42
TOP1MT-216ENST00000522121 USP1O94782 785 aa17.67■□□□□ 0.42
TOP1MT-216ENST00000522121 CATP04040 527 aaKnown RBP17.67■□□□□ 0.42
TOP1MT-216ENST00000522121 ERVK-10P10266 1014 aa17.67■□□□□ 0.42
TOP1MT-216ENST00000522121 ITGAXP20702 1163 aa17.67■□□□□ 0.42
TOP1MT-216ENST00000522121 GNLYP22749 145 aa17.67■□□□□ 0.42
TOP1MT-216ENST00000522121 RPA3P35244 121 aaPredicted RBP17.67■□□□□ 0.42
TOP1MT-216ENST00000522121 HSD17B2P37059 387 aa17.67■□□□□ 0.42
TOP1MT-216ENST00000522121 COILP38432 576 aaPredicted RBP17.67■□□□□ 0.42
TOP1MT-216ENST00000522121 SOX8P57073 446 aa17.67■□□□□ 0.42
TOP1MT-216ENST00000522121 FOXL2P58012 376 aa17.67■□□□□ 0.42
TOP1MT-216ENST00000522121 ARHGAP19Q14CB8 494 aa17.67■□□□□ 0.42
TOP1MT-216ENST00000522121 KLHL38Q2WGJ6 581 aa17.67■□□□□ 0.42
TOP1MT-216ENST00000522121 ACSBG2Q5FVE4 666 aa17.67■□□□□ 0.42
TOP1MT-216ENST00000522121 CCDC137Q6PK04 289 aaKnown RBP17.67■□□□□ 0.42
TOP1MT-216ENST00000522121 SMPDL3AQ92484 453 aa17.67■□□□□ 0.42
TOP1MT-216ENST00000522121 MS4A14Q96JA4 679 aa17.67■□□□□ 0.42
TOP1MT-216ENST00000522121 VPS50Q96JG6 964 aa17.67■□□□□ 0.42
TOP1MT-216ENST00000522121 ACAT2Q9BWD1 397 aa17.67■□□□□ 0.42
TOP1MT-216ENST00000522121 LUZP4Q9P127 313 aa17.67■□□□□ 0.42
TOP1MT-216ENST00000522121 GALPQ9UBC7 116 aa17.67■□□□□ 0.42
TOP1MT-216ENST00000522121 ZC3H7BQ9UGR2 993 aaKnown RBP17.67■□□□□ 0.42
TOP1MT-216ENST00000522121 FLNCQ14315 2725 aa17.66■□□□□ 0.42
TOP1MT-216ENST00000522121 SEC16AO15027 2179 aa17.66■□□□□ 0.42
TOP1MT-216ENST00000522121 A0A0J9YVX5 310 aa17.66■□□□□ 0.42
TOP1MT-216ENST00000522121 A0A1W2PPV9 198 aa17.66■□□□□ 0.42
TOP1MT-216ENST00000522121 HYKKA2RU49 373 aa17.66■□□□□ 0.42
TOP1MT-216ENST00000522121 ARHGEF33A8MVX0 844 aa17.66■□□□□ 0.42
TOP1MT-216ENST00000522121 GOLGA8MH3BSY2 632 aa17.66■□□□□ 0.42
TOP1MT-216ENST00000522121 PGRMC1O00264 195 aaKnown RBP17.66■□□□□ 0.42
TOP1MT-216ENST00000522121 PSIP1O75475 530 aaKnown RBP17.66■□□□□ 0.42
TOP1MT-216ENST00000522121 EIF2S1P05198 315 aaKnown RBP17.66■□□□□ 0.42
TOP1MT-216ENST00000522121 UQCRFS1P47985 274 aa17.66■□□□□ 0.42
TOP1MT-216ENST00000522121 SRSF1Q07955 248 aaKnown RBP eCLIP17.66■□□□□ 0.42
TOP1MT-216ENST00000522121 AIMP2Q13155 320 aaKnown RBP17.66■□□□□ 0.42
TOP1MT-216ENST00000522121 TSTA3Q13630 321 aaPredicted RBP17.66■□□□□ 0.42
TOP1MT-216ENST00000522121 FASTKQ14296 549 aaKnown RBP17.66■□□□□ 0.42
TOP1MT-216ENST00000522121 NKG7Q16617 165 aa17.66■□□□□ 0.42
TOP1MT-216ENST00000522121 FRMPD2BQ6IN97 320 aa17.66■□□□□ 0.42
TOP1MT-216ENST00000522121 NEK10Q6ZWH5 1172 aa17.66■□□□□ 0.42
TOP1MT-216ENST00000522121 RNF44Q7L0R7 432 aa17.66■□□□□ 0.42
TOP1MT-216ENST00000522121 LMNTD2Q8IXW0 634 aa17.66■□□□□ 0.42
TOP1MT-216ENST00000522121 CALML6Q8TD86 181 aa17.66■□□□□ 0.42
TOP1MT-216ENST00000522121 GRK7Q8WTQ7 553 aa17.66■□□□□ 0.42
TOP1MT-216ENST00000522121 SERPINB12Q96P63 405 aa17.66■□□□□ 0.42
TOP1MT-216ENST00000522121 ZFYVE21Q9BQ24 234 aa17.66■□□□□ 0.42
TOP1MT-216ENST00000522121 TRIM56Q9BRZ2 755 aaKnown RBP17.66■□□□□ 0.42
TOP1MT-216ENST00000522121 DPH7Q9BTV6 452 aa17.66■□□□□ 0.42
TOP1MT-216ENST00000522121 SLC29A3Q9BZD2 475 aa17.66■□□□□ 0.42
TOP1MT-216ENST00000522121 MRPS30Q9NP92 439 aaKnown RBP17.66■□□□□ 0.42
TOP1MT-216ENST00000522121 UTP6Q9NYH9 597 aaKnown RBP17.66■□□□□ 0.42
TOP1MT-216ENST00000522121 B3GNT3Q9Y2A9 372 aa17.66■□□□□ 0.42
TOP1MT-216ENST00000522121 MAD1L1Q9Y6D9 718 aa17.66■□□□□ 0.42
TOP1MT-216ENST00000522121 MED13Q9UHV7 2174 aa17.65■□□□□ 0.42
TOP1MT-216ENST00000522121 GOLGA6L10A0A0M3HER8 536 aa17.65■□□□□ 0.42
TOP1MT-216ENST00000522121 OR2A25A4D2G3 310 aa17.65■□□□□ 0.42
TOP1MT-216ENST00000522121 MYO1CO00159 1063 aa17.65■□□□□ 0.42
TOP1MT-216ENST00000522121 PHF2O75151 1096 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms