RNA–Protein interactions for RNA: ENST00000518060.5

SPIDR-205, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SPIDR, Length 482 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-205ENST00000518060 LUZP4Q9P127 313 aa10.15□□□□□ -0.78
SPIDR-205ENST00000518060 CDC23Q9UJX2 597 aa10.15□□□□□ -0.78
SPIDR-205ENST00000518060 PLAAQ9Y263 795 aa10.15□□□□□ -0.78
SPIDR-205ENST00000518060 ZCWPW2A0A1B0GU75 182 aa10.14□□□□□ -0.79
SPIDR-205ENST00000518060 TTLL8A6PVC2 850 aa10.14□□□□□ -0.79
SPIDR-205ENST00000518060 H3BMH7 237 aa10.14□□□□□ -0.79
SPIDR-205ENST00000518060 NRP2O60462 931 aa10.14□□□□□ -0.79
SPIDR-205ENST00000518060 VPS26AO75436 327 aa10.14□□□□□ -0.79
SPIDR-205ENST00000518060 CD63P08962 238 aa10.14□□□□□ -0.79
SPIDR-205ENST00000518060 PIM1P11309 404 aaPredicted RBP10.14□□□□□ -0.79
SPIDR-205ENST00000518060 PGAM1P18669 254 aa10.14□□□□□ -0.79
SPIDR-205ENST00000518060 OR1D4P47884 311 aa10.14□□□□□ -0.79
SPIDR-205ENST00000518060 MLLT10P55197 1068 aa10.14□□□□□ -0.79
SPIDR-205ENST00000518060 ADARP55265 1226 aaKnown RBP10.14□□□□□ -0.79
SPIDR-205ENST00000518060 FOXK1P85037 733 aa10.14□□□□□ -0.79
SPIDR-205ENST00000518060 NAA25Q14CX7 972 aa10.14□□□□□ -0.79
SPIDR-205ENST00000518060 BBS9Q3SYG4 887 aa10.14□□□□□ -0.79
SPIDR-205ENST00000518060 NADK2Q4G0N4 442 aa10.14□□□□□ -0.79
SPIDR-205ENST00000518060 HSP90AA5PQ58FG0 334 aa10.14□□□□□ -0.79
SPIDR-205ENST00000518060 SHISA6Q6ZSJ9 500 aa10.14□□□□□ -0.79
SPIDR-205ENST00000518060 MED25Q71SY5 747 aa10.14□□□□□ -0.79
SPIDR-205ENST00000518060 KCNMB4Q86W47 210 aa10.14□□□□□ -0.79
SPIDR-205ENST00000518060 ATCAYQ86WG3 371 aa10.14□□□□□ -0.79
SPIDR-205ENST00000518060 NAT8LQ8N9F0 302 aa10.14□□□□□ -0.79
SPIDR-205ENST00000518060 TMEM102Q8N9M5 508 aaPredicted RBP10.14□□□□□ -0.79
SPIDR-205ENST00000518060 CLEC1AQ8NC01 280 aa10.14□□□□□ -0.79
SPIDR-205ENST00000518060 FDCSPQ8NFU4 85 aa10.14□□□□□ -0.79
SPIDR-205ENST00000518060 OR2Y1Q8NGV0 311 aa10.14□□□□□ -0.79
SPIDR-205ENST00000518060 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.14□□□□□ -0.79
SPIDR-205ENST00000518060 SMPDL3AQ92484 453 aa10.14□□□□□ -0.79
SPIDR-205ENST00000518060 CFAP36Q96G28 342 aa10.14□□□□□ -0.79
SPIDR-205ENST00000518060 CABS1Q96KC9 395 aa10.14□□□□□ -0.79
SPIDR-205ENST00000518060 FER1L6-AS2Q96M78 137 aa10.14□□□□□ -0.79
SPIDR-205ENST00000518060 PKP4Q99569 1192 aa10.14□□□□□ -0.79
SPIDR-205ENST00000518060 NDNQ99608 321 aa10.14□□□□□ -0.79
SPIDR-205ENST00000518060 GPR21Q99679 349 aa10.14□□□□□ -0.79
SPIDR-205ENST00000518060 SLC30A3Q99726 388 aa10.14□□□□□ -0.79
SPIDR-205ENST00000518060 MRPS30Q9NP92 439 aaKnown RBP10.14□□□□□ -0.79
SPIDR-205ENST00000518060 PPANQ9NQ55 473 aaKnown RBP10.14□□□□□ -0.79
SPIDR-205ENST00000518060 ASH1LQ9NR48 2969 aaKnown RBP10.14□□□□□ -0.79
SPIDR-205ENST00000518060 GPR83Q9NYM4 423 aa10.14□□□□□ -0.79
SPIDR-205ENST00000518060 TAC3Q9UHF0 121 aa10.14□□□□□ -0.79
SPIDR-205ENST00000518060 TRMT6Q9UJA5 497 aaKnown RBP10.14□□□□□ -0.79
SPIDR-205ENST00000518060 FBXO5Q9UKT4 447 aa10.14□□□□□ -0.79
SPIDR-205ENST00000518060 ZNF451Q9Y4E5 1061 aa10.14□□□□□ -0.79
SPIDR-205ENST00000518060 MAU2Q9Y6X3 613 aa10.14□□□□□ -0.79
SPIDR-205ENST00000518060 HECTD1Q9ULT8 2610 aa10.14□□□□□ -0.79
SPIDR-205ENST00000518060 ZNF839A8K0R7 811 aa10.13□□□□□ -0.79
SPIDR-205ENST00000518060 TARM1B6A8C7 271 aa10.13□□□□□ -0.79
SPIDR-205ENST00000518060 DSCR3O14972 297 aa10.13□□□□□ -0.79
SPIDR-205ENST00000518060 CTSVO60911 334 aa10.13□□□□□ -0.79
SPIDR-205ENST00000518060 BANF1O75531 89 aa10.13□□□□□ -0.79
SPIDR-205ENST00000518060 KLF7O75840 302 aaPredicted RBP10.13□□□□□ -0.79
SPIDR-205ENST00000518060 CCNDBP1O95273 360 aa10.13□□□□□ -0.79
SPIDR-205ENST00000518060 FKBP9O95302 570 aa10.13□□□□□ -0.79
SPIDR-205ENST00000518060 MATN4O95460 622 aa10.13□□□□□ -0.79
SPIDR-205ENST00000518060 TCP1P17987 556 aaKnown RBP10.13□□□□□ -0.79
SPIDR-205ENST00000518060 CLCN7P51798 805 aa10.13□□□□□ -0.79
SPIDR-205ENST00000518060 PNLIPRP1P54315 467 aa10.13□□□□□ -0.79
SPIDR-205ENST00000518060 GNG11P61952 73 aa10.13□□□□□ -0.79
SPIDR-205ENST00000518060 DHX9Q08211 1270 aaKnown RBP10.13□□□□□ -0.79
SPIDR-205ENST00000518060 PTK6Q13882 451 aa10.13□□□□□ -0.79
SPIDR-205ENST00000518060 SSPNQ14714 243 aa10.13□□□□□ -0.79
SPIDR-205ENST00000518060 CRYMQ14894 314 aa10.13□□□□□ -0.79
SPIDR-205ENST00000518060 FAM214AQ32MH5 1076 aa10.13□□□□□ -0.79
SPIDR-205ENST00000518060 WASHC2DQ5SRD0 308 aa10.13□□□□□ -0.79
SPIDR-205ENST00000518060 HP1BP3Q5SSJ5 553 aaPredicted RBP10.13□□□□□ -0.79
SPIDR-205ENST00000518060 RNASEH2BQ5TBB1 312 aaKnown RBP10.13□□□□□ -0.79
SPIDR-205ENST00000518060 FRMPD2BQ6IN97 320 aa10.13□□□□□ -0.79
SPIDR-205ENST00000518060 ZNF549Q6P9A3 640 aa10.13□□□□□ -0.79
SPIDR-205ENST00000518060 PIWIL4Q7Z3Z4 852 aaKnown RBP10.13□□□□□ -0.79
SPIDR-205ENST00000518060 SPNS2Q8IVW8 549 aa10.13□□□□□ -0.79
SPIDR-205ENST00000518060 CPNE9Q8IYJ1 553 aa10.13□□□□□ -0.79
SPIDR-205ENST00000518060 PRSS58Q8IYP2 241 aa10.13□□□□□ -0.79
SPIDR-205ENST00000518060 AGGF1Q8N302 714 aaeCLIP10.13□□□□□ -0.79
SPIDR-205ENST00000518060 PPFIBP2Q8ND30 876 aa10.13□□□□□ -0.79
SPIDR-205ENST00000518060 GIMAP7Q8NHV1 300 aa10.13□□□□□ -0.79
SPIDR-205ENST00000518060 GABPB2Q8TAK5 448 aaPredicted RBP10.13□□□□□ -0.79
SPIDR-205ENST00000518060 HMGCLL1Q8TB92 370 aa10.13□□□□□ -0.79
SPIDR-205ENST00000518060 KCNJ9Q92806 393 aa10.13□□□□□ -0.79
SPIDR-205ENST00000518060 COL26A1Q96A83 441 aa10.13□□□□□ -0.79
SPIDR-205ENST00000518060 ZUFSPQ96AP4 578 aa10.13□□□□□ -0.79
SPIDR-205ENST00000518060 PTERQ96BW5 349 aa10.13□□□□□ -0.79
SPIDR-205ENST00000518060 IP6K3Q96PC2 410 aa10.13□□□□□ -0.79
SPIDR-205ENST00000518060 DPH7Q9BTV6 452 aa10.13□□□□□ -0.79
SPIDR-205ENST00000518060 NUDT9Q9BW91 350 aa10.13□□□□□ -0.79
SPIDR-205ENST00000518060 YIPF2Q9BWQ6 316 aa10.13□□□□□ -0.79
SPIDR-205ENST00000518060 SOX17Q9H6I2 414 aaPredicted RBP10.13□□□□□ -0.79
SPIDR-205ENST00000518060 P4HTMQ9NXG6 502 aa10.13□□□□□ -0.79
SPIDR-205ENST00000518060 STOX2Q9P2F5 926 aaPredicted RBP10.13□□□□□ -0.79
SPIDR-205ENST00000518060 ZC3H7BQ9UGR2 993 aaKnown RBP10.13□□□□□ -0.79
SPIDR-205ENST00000518060 NEU2Q9Y3R4 380 aa10.13□□□□□ -0.79
SPIDR-205ENST00000518060 PCDHGA9Q9Y5G4 932 aaKnown RBP10.13□□□□□ -0.79
SPIDR-205ENST00000518060 SPTBP11277 2137 aa10.13□□□□□ -0.79
SPIDR-205ENST00000518060 NBASA2RRP1 2371 aa10.12□□□□□ -0.79
SPIDR-205ENST00000518060 UBR5O95071 2799 aaPredicted RBP10.12□□□□□ -0.79
SPIDR-205ENST00000518060 LOC105369274A0A096LPK9 316 aa10.12□□□□□ -0.79
SPIDR-205ENST00000518060 LOC102723532A0A0G2JNH3 316 aa10.12□□□□□ -0.79
SPIDR-205ENST00000518060 A0A1W2PPV9 198 aa10.12□□□□□ -0.79
SPIDR-205ENST00000518060 HYKKA2RU49 373 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms