RNA–Protein interactions for RNA: ENST00000514305.5

USP53-208, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 2

Gene USP53, Length 504 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-208ENST00000514305 S100BP04271 92 aaPredicted RBP19.51■□□□□ 0.71
USP53-208ENST00000514305 LIPCP11150 499 aa19.51■□□□□ 0.71
USP53-208ENST00000514305 RAB28P51157 221 aa19.51■□□□□ 0.71
USP53-208ENST00000514305 OR1D5P58170 312 aa19.51■□□□□ 0.71
USP53-208ENST00000514305 TMEM164Q5U3C3 297 aa19.51■□□□□ 0.71
USP53-208ENST00000514305 KIAA1614Q5VZ46 1190 aa19.51■□□□□ 0.71
USP53-208ENST00000514305 PLXDC1Q8IUK5 500 aa19.51■□□□□ 0.71
USP53-208ENST00000514305 GOLGA6L1Q8N7Z2 621 aa19.51■□□□□ 0.71
USP53-208ENST00000514305 ANKRD49Q8WVL7 239 aa19.51■□□□□ 0.71
USP53-208ENST00000514305 KIAA1191Q96A73 305 aa19.51■□□□□ 0.71
USP53-208ENST00000514305 ALKBH8Q96BT7 664 aaKnown RBP19.51■□□□□ 0.71
USP53-208ENST00000514305 SEMA6CQ9H3T2 930 aa19.51■□□□□ 0.71
USP53-208ENST00000514305 VIPAS39Q9H9C1 493 aa19.51■□□□□ 0.71
USP53-208ENST00000514305 PRAMEF33A0A0G2JMD5 474 aa19.5■□□□□ 0.71
USP53-208ENST00000514305 B4GAT1O43505 415 aa19.5■□□□□ 0.71
USP53-208ENST00000514305 PRAMEF10O60809 474 aa19.5■□□□□ 0.71
USP53-208ENST00000514305 RFPL1O75677 317 aa19.5■□□□□ 0.71
USP53-208ENST00000514305 ANXA5P08758 320 aa19.5■□□□□ 0.71
USP53-208ENST00000514305 CD1DP15813 335 aa19.5■□□□□ 0.71
USP53-208ENST00000514305 CDKL1Q00532 357 aa19.5■□□□□ 0.71
USP53-208ENST00000514305 SQSTM1Q13501 440 aa19.5■□□□□ 0.71
USP53-208ENST00000514305 LY6DQ14210 128 aa19.5■□□□□ 0.71
USP53-208ENST00000514305 CDKL4Q5MAI5 379 aa19.5■□□□□ 0.71
USP53-208ENST00000514305 ANKS6Q68DC2 871 aa19.5■□□□□ 0.71
USP53-208ENST00000514305 TMPRSS9Q7Z410 1059 aa19.5■□□□□ 0.71
USP53-208ENST00000514305 GPSM1Q86YR5 675 aa19.5■□□□□ 0.71
USP53-208ENST00000514305 TCAIMQ8N3R3 496 aa19.5■□□□□ 0.71
USP53-208ENST00000514305 OR4E2Q8NGC2 313 aa19.5■□□□□ 0.71
USP53-208ENST00000514305 RHEBL1Q8TAI7 183 aa19.5■□□□□ 0.71
USP53-208ENST00000514305 ZDHHC12Q96GR4 267 aa19.5■□□□□ 0.71
USP53-208ENST00000514305 CENPHQ9H3R5 247 aa19.5■□□□□ 0.71
USP53-208ENST00000514305 ARL15Q9NXU5 204 aa19.5■□□□□ 0.71
USP53-208ENST00000514305 RNF112Q9ULX5 631 aa19.5■□□□□ 0.71
USP53-208ENST00000514305 TMCO1Q9UM00 188 aa19.5■□□□□ 0.71
USP53-208ENST00000514305 OARD1Q9Y530 152 aa19.5■□□□□ 0.71
USP53-208ENST00000514305 PCDHB11Q9Y5F2 797 aa19.5■□□□□ 0.71
USP53-208ENST00000514305 IGHV1OR21-1A0A087WYE8 117 aa19.49■□□□□ 0.71
USP53-208ENST00000514305 ARHGEF33A8MVX0 844 aa19.49■□□□□ 0.71
USP53-208ENST00000514305 MYO1CO00159 1063 aa19.49■□□□□ 0.71
USP53-208ENST00000514305 TFEBP19484 476 aa19.49■□□□□ 0.71
USP53-208ENST00000514305 BDKRB1P46663 353 aa19.49■□□□□ 0.71
USP53-208ENST00000514305 HNMTP50135 292 aa19.49■□□□□ 0.71
USP53-208ENST00000514305 CSRP3P50461 194 aa19.49■□□□□ 0.71
USP53-208ENST00000514305 ZNF844Q08AG5 666 aa19.49■□□□□ 0.71
USP53-208ENST00000514305 TGIF1Q15583 401 aa19.49■□□□□ 0.71
USP53-208ENST00000514305 FBXO38Q6PIJ6 1188 aa19.49■□□□□ 0.71
USP53-208ENST00000514305 USP53Q70EK8 1073 aa19.49■□□□□ 0.71
USP53-208ENST00000514305 NCSTNQ92542 709 aa19.49■□□□□ 0.71
USP53-208ENST00000514305 USP7Q93009 1102 aa19.49■□□□□ 0.71
USP53-208ENST00000514305 NXNL1Q96CM4 212 aa19.49■□□□□ 0.71
USP53-208ENST00000514305 SCYL1Q96KG9 808 aa19.49■□□□□ 0.71
USP53-208ENST00000514305 SMC6Q96SB8 1091 aa19.49■□□□□ 0.71
USP53-208ENST00000514305 EGFL8Q99944 293 aa19.49■□□□□ 0.71
USP53-208ENST00000514305 NUDT22Q9BRQ3 303 aa19.49■□□□□ 0.71
USP53-208ENST00000514305 TBC1D10AQ9BXI6 508 aa19.49■□□□□ 0.71
USP53-208ENST00000514305 RAB33BQ9H082 229 aa19.49■□□□□ 0.71
USP53-208ENST00000514305 IQCGQ9H095 443 aaKnown RBP19.49■□□□□ 0.71
USP53-208ENST00000514305 PCMTD2Q9NV79 361 aa19.49■□□□□ 0.71
USP53-208ENST00000514305 HRASLS2Q9NWW9 162 aa19.49■□□□□ 0.71
USP53-208ENST00000514305 EURLQ9NYK6 297 aa19.49■□□□□ 0.71
USP53-208ENST00000514305 PDE10AQ9Y233 779 aa19.49■□□□□ 0.71
USP53-208ENST00000514305 NPEPPSL1A6NEC2 478 aa19.48■□□□□ 0.71
USP53-208ENST00000514305 C2orf74A8MZ97 194 aa19.48■□□□□ 0.71
USP53-208ENST00000514305 HGSO14964 777 aaPredicted RBP19.48■□□□□ 0.71
USP53-208ENST00000514305 MAP3K7O43318 606 aa19.48■□□□□ 0.71
USP53-208ENST00000514305 GLRA3O75311 464 aa19.48■□□□□ 0.71
USP53-208ENST00000514305 FKBP9O95302 570 aa19.48■□□□□ 0.71
USP53-208ENST00000514305 PLA2G2AP14555 144 aa19.48■□□□□ 0.71
USP53-208ENST00000514305 CCND1P24385 295 aa19.48■□□□□ 0.71
USP53-208ENST00000514305 CD82P27701 267 aa19.48■□□□□ 0.71
USP53-208ENST00000514305 ETV5P41161 510 aa19.48■□□□□ 0.71
USP53-208ENST00000514305 C16orf72Q14CZ0 275 aa19.48■□□□□ 0.71
USP53-208ENST00000514305 MANEAQ5SRI9 462 aa19.48■□□□□ 0.71
USP53-208ENST00000514305 WDR74Q6RFH5 385 aaPredicted RBP19.48■□□□□ 0.71
USP53-208ENST00000514305 RASGRP3Q8IV61 690 aa19.48■□□□□ 0.71
USP53-208ENST00000514305 OR2L8Q8NGY9 312 aa19.48■□□□□ 0.71
USP53-208ENST00000514305 KCTD4Q8WVF5 259 aa19.48■□□□□ 0.71
USP53-208ENST00000514305 PGM2Q96G03 612 aa19.48■□□□□ 0.71
USP53-208ENST00000514305 CD180Q99467 661 aa19.48■□□□□ 0.71
USP53-208ENST00000514305 EPHA6Q9UF33 1036 aa19.48■□□□□ 0.71
USP53-208ENST00000514305 GRID1Q9ULK0 1009 aa19.48■□□□□ 0.71
USP53-208ENST00000514305 COL6A6A6NMZ7 2263 aa19.48■□□□□ 0.71
USP53-208ENST00000514305 PIPSLA2A3N6 862 aa19.47■□□□□ 0.71
USP53-208ENST00000514305 OR6C74A6NCV1 312 aa19.47■□□□□ 0.71
USP53-208ENST00000514305 OR5K3A6NET4 321 aa19.47■□□□□ 0.71
USP53-208ENST00000514305 CDC7O00311 574 aa19.47■□□□□ 0.71
USP53-208ENST00000514305 COPEO14579 308 aa19.47■□□□□ 0.71
USP53-208ENST00000514305 KERAO60938 352 aa19.47■□□□□ 0.71
USP53-208ENST00000514305 TYRP1P17643 537 aa19.47■□□□□ 0.71
USP53-208ENST00000514305 KRT4P19013 534 aa19.47■□□□□ 0.71
USP53-208ENST00000514305 PKLRP30613 574 aa19.47■□□□□ 0.71
USP53-208ENST00000514305 CAPZBP47756 277 aa19.47■□□□□ 0.71
USP53-208ENST00000514305 PGGT1BP53609 377 aa19.47■□□□□ 0.71
USP53-208ENST00000514305 KIR2DS3Q14952 304 aa19.47■□□□□ 0.71
USP53-208ENST00000514305 NAA25Q14CX7 972 aa19.47■□□□□ 0.71
USP53-208ENST00000514305 TSNQ15631 228 aaKnown RBP19.47■□□□□ 0.71
USP53-208ENST00000514305 ZNF761Q86XN6 746 aaPredicted RBP19.47■□□□□ 0.71
USP53-208ENST00000514305 SYTL1Q8IYJ3 562 aa19.47■□□□□ 0.71
USP53-208ENST00000514305 CENPLQ8N0S6 344 aaPredicted RBP19.47■□□□□ 0.71
USP53-208ENST00000514305 CARFQ8N187 725 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms