RNA–Protein interactions for RNA: ENST00000512928.1

KDM3B-208, Transcript of lysine demethylase 3B, humanhuman

TSL 2

Gene KDM3B, Length 627 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-208ENST00000512928 TERTO14746 1132 aaKnown RBP6.25□□□□□ -1.41
KDM3B-208ENST00000512928 SNPHO15079 494 aa6.25□□□□□ -1.41
KDM3B-208ENST00000512928 ZBTB14O43829 449 aa6.25□□□□□ -1.41
KDM3B-208ENST00000512928 RFPL1O75677 317 aa6.25□□□□□ -1.41
KDM3B-208ENST00000512928 DNAJB5O75953 348 aa6.25□□□□□ -1.41
KDM3B-208ENST00000512928 SEC31AO94979 1220 aaKnown RBP6.25□□□□□ -1.41
KDM3B-208ENST00000512928 MSL3P1P0C860 447 aa6.25□□□□□ -1.41
KDM3B-208ENST00000512928 CBSLP0DN79 551 aa6.25□□□□□ -1.41
KDM3B-208ENST00000512928 NR1D1P20393 614 aa6.25□□□□□ -1.41
KDM3B-208ENST00000512928 SAT1P21673 171 aa6.25□□□□□ -1.41
KDM3B-208ENST00000512928 MCM3P25205 808 aa6.25□□□□□ -1.41
KDM3B-208ENST00000512928 ATP5DP30049 168 aa6.25□□□□□ -1.41
KDM3B-208ENST00000512928 CMPK1P30085 196 aa6.25□□□□□ -1.41
KDM3B-208ENST00000512928 RORAP35398 523 aa6.25□□□□□ -1.41
KDM3B-208ENST00000512928 CBSP35520 551 aa6.25□□□□□ -1.41
KDM3B-208ENST00000512928 FOLR3P41439 243 aa6.25□□□□□ -1.41
KDM3B-208ENST00000512928 ELK3P41970 407 aa6.25□□□□□ -1.41
KDM3B-208ENST00000512928 CCL11P51671 97 aa6.25□□□□□ -1.41
KDM3B-208ENST00000512928 CLCN7P51798 805 aa6.25□□□□□ -1.41
KDM3B-208ENST00000512928 ITGA8P53708 1063 aa6.25□□□□□ -1.41
KDM3B-208ENST00000512928 ARL4CP56559 192 aa6.25□□□□□ -1.41
KDM3B-208ENST00000512928 VSX2P58304 361 aaPredicted RBP6.25□□□□□ -1.41
KDM3B-208ENST00000512928 DCDP81605 110 aaKnown RBP6.25□□□□□ -1.41
KDM3B-208ENST00000512928 CKAP4Q07065 602 aaKnown RBP6.25□□□□□ -1.41
KDM3B-208ENST00000512928 PDIA2Q13087 525 aaKnown RBP6.25□□□□□ -1.41
KDM3B-208ENST00000512928 FASTKQ14296 549 aaKnown RBP6.25□□□□□ -1.41
KDM3B-208ENST00000512928 MORF4L2Q15014 288 aa6.25□□□□□ -1.41
KDM3B-208ENST00000512928 NCF4Q15080 339 aa6.25□□□□□ -1.41
KDM3B-208ENST00000512928 UGT8Q16880 541 aa6.25□□□□□ -1.41
KDM3B-208ENST00000512928 MSS51Q4VC12 460 aa6.25□□□□□ -1.41
KDM3B-208ENST00000512928 LACTB2Q53H82 288 aaPredicted RBP6.25□□□□□ -1.41
KDM3B-208ENST00000512928 ZC3H12BQ5HYM0 836 aaKnown RBP6.25□□□□□ -1.41
KDM3B-208ENST00000512928 EEF1AKMT2Q5JPI9 291 aaKnown RBP6.25□□□□□ -1.41
KDM3B-208ENST00000512928 CPZQ66K79 652 aa6.25□□□□□ -1.41
KDM3B-208ENST00000512928 DUPD1Q68J44 220 aa6.25□□□□□ -1.41
KDM3B-208ENST00000512928 ZNF549Q6P9A3 640 aa6.25□□□□□ -1.41
KDM3B-208ENST00000512928 TLDC1Q6P9B6 456 aa6.25□□□□□ -1.41
KDM3B-208ENST00000512928 FIGLAQ6QHK4 219 aa6.25□□□□□ -1.41
KDM3B-208ENST00000512928 FAM198BQ6UWH4 519 aa6.25□□□□□ -1.41
KDM3B-208ENST00000512928 CAPN12Q6ZSI9 719 aa6.25□□□□□ -1.41
KDM3B-208ENST00000512928 TTLL10Q6ZVT0 673 aa6.25□□□□□ -1.41
KDM3B-208ENST00000512928 PIWIL4Q7Z3Z4 852 aaKnown RBP6.25□□□□□ -1.41
KDM3B-208ENST00000512928 ANKMY2Q8IV38 441 aa6.25□□□□□ -1.41
KDM3B-208ENST00000512928 MCATQ8IVS2 390 aaKnown RBP6.25□□□□□ -1.41
KDM3B-208ENST00000512928 PALM2Q8IXS6 379 aa6.25□□□□□ -1.41
KDM3B-208ENST00000512928 LMNTD2Q8IXW0 634 aa6.25□□□□□ -1.41
KDM3B-208ENST00000512928 DNAJC22Q8N4W6 341 aa6.25□□□□□ -1.41
KDM3B-208ENST00000512928 GPATCH11Q8N954 259 aa6.25□□□□□ -1.41
KDM3B-208ENST00000512928 TTC29Q8NA56 475 aaPredicted RBP6.25□□□□□ -1.41
KDM3B-208ENST00000512928 OR2L3Q8NG85 312 aa6.25□□□□□ -1.41
KDM3B-208ENST00000512928 OR9A1PQ8NGU1 263 aa6.25□□□□□ -1.41
KDM3B-208ENST00000512928 GIMAP7Q8NHV1 300 aa6.25□□□□□ -1.41
KDM3B-208ENST00000512928 DENND1AQ8TEH3 1009 aa6.25□□□□□ -1.41
KDM3B-208ENST00000512928 THAP4Q8WY91 577 aa6.25□□□□□ -1.41
KDM3B-208ENST00000512928 KCNJ9Q92806 393 aa6.25□□□□□ -1.41
KDM3B-208ENST00000512928 INPP5DQ92835 1189 aa6.25□□□□□ -1.41
KDM3B-208ENST00000512928 ALKBH8Q96BT7 664 aaKnown RBP6.25□□□□□ -1.41
KDM3B-208ENST00000512928 CERS2Q96G23 380 aa6.25□□□□□ -1.41
KDM3B-208ENST00000512928 LRFN5Q96NI6 719 aa6.25□□□□□ -1.41
KDM3B-208ENST00000512928 PKP4Q99569 1192 aa6.25□□□□□ -1.41
KDM3B-208ENST00000512928 SLC30A3Q99726 388 aa6.25□□□□□ -1.41
KDM3B-208ENST00000512928 EBNA1BP2Q99848 306 aaKnown RBP6.25□□□□□ -1.41
KDM3B-208ENST00000512928 C17orf62Q9BQA9 187 aa6.25□□□□□ -1.41
KDM3B-208ENST00000512928 DPH2Q9BQC3 489 aaPredicted RBP6.25□□□□□ -1.41
KDM3B-208ENST00000512928 SELENOSQ9BQE4 189 aa6.25□□□□□ -1.41
KDM3B-208ENST00000512928 WDR83Q9BRX9 315 aaKnown RBP6.25□□□□□ -1.41
KDM3B-208ENST00000512928 NAT9Q9BTE0 207 aa6.25□□□□□ -1.41
KDM3B-208ENST00000512928 MENTQ9BUN1 341 aa6.25□□□□□ -1.41
KDM3B-208ENST00000512928 NLNQ9BYT8 704 aa6.25□□□□□ -1.41
KDM3B-208ENST00000512928 PHACTR1Q9C0D0 580 aa6.25□□□□□ -1.41
KDM3B-208ENST00000512928 DPH5Q9H2P9 285 aa6.25□□□□□ -1.41
KDM3B-208ENST00000512928 ACSS2Q9NR19 701 aa6.25□□□□□ -1.41
KDM3B-208ENST00000512928 GRHL1Q9NZI5 618 aa6.25□□□□□ -1.41
KDM3B-208ENST00000512928 SPATA7Q9P0W8 599 aa6.25□□□□□ -1.41
KDM3B-208ENST00000512928 ZC3H7BQ9UGR2 993 aaKnown RBP6.25□□□□□ -1.41
KDM3B-208ENST00000512928 TAC3Q9UHF0 121 aa6.25□□□□□ -1.41
KDM3B-208ENST00000512928 TCFL5Q9UL49 500 aa6.25□□□□□ -1.41
KDM3B-208ENST00000512928 G3BP2Q9UN86 482 aaKnown RBP6.25□□□□□ -1.41
KDM3B-208ENST00000512928 SRPK3Q9UPE1 567 aa6.25□□□□□ -1.41
KDM3B-208ENST00000512928 TP53TG5Q9Y2B4 290 aa6.25□□□□□ -1.41
KDM3B-208ENST00000512928 SNX24Q9Y343 169 aa6.25□□□□□ -1.41
KDM3B-208ENST00000512928 PTRH2Q9Y3E5 179 aaKnown RBP6.25□□□□□ -1.41
KDM3B-208ENST00000512928 COMMD10Q9Y6G5 202 aa6.25□□□□□ -1.41
KDM3B-208ENST00000512928 COL6A6A6NMZ7 2263 aa6.25□□□□□ -1.41
KDM3B-208ENST00000512928 A0A1B0GX78 115 aa6.24□□□□□ -1.41
KDM3B-208ENST00000512928 A6NL46 340 aa6.24□□□□□ -1.41
KDM3B-208ENST00000512928 SMAPO00193 183 aa6.24□□□□□ -1.41
KDM3B-208ENST00000512928 RAD51CO43502 376 aa6.24□□□□□ -1.41
KDM3B-208ENST00000512928 NRP2O60462 931 aa6.24□□□□□ -1.41
KDM3B-208ENST00000512928 PSIP1O75475 530 aaKnown RBP6.24□□□□□ -1.41
KDM3B-208ENST00000512928 CCNDBP1O95273 360 aa6.24□□□□□ -1.41
KDM3B-208ENST00000512928 MATN4O95460 622 aa6.24□□□□□ -1.41
KDM3B-208ENST00000512928 SLC16A8O95907 504 aa6.24□□□□□ -1.41
KDM3B-208ENST00000512928 RAB40ALP0C0E4 278 aa6.24□□□□□ -1.41
KDM3B-208ENST00000512928 ENO3P13929 434 aaPredicted RBP6.24□□□□□ -1.41
KDM3B-208ENST00000512928 ECHS1P30084 290 aa6.24□□□□□ -1.41
KDM3B-208ENST00000512928 RGS4P49798 205 aa6.24□□□□□ -1.41
KDM3B-208ENST00000512928 PGDP52209 483 aa6.24□□□□□ -1.41
KDM3B-208ENST00000512928 PMS2P54278 862 aa6.24□□□□□ -1.41
KDM3B-208ENST00000512928 PNLIPRP1P54315 467 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms