RNA–Protein interactions for RNA: ENST00000511843.5

RNF4-215, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-215ENST00000511843 TTLL9Q3SXZ7 439 aa12.76□□□□□ -0.37
RNF4-215ENST00000511843 CRTC2Q53ET0 693 aaPredicted RBP12.76□□□□□ -0.37
RNF4-215ENST00000511843 SYT10Q6XYQ8 523 aa12.76□□□□□ -0.37
RNF4-215ENST00000511843 LMNTD2Q8IXW0 634 aa12.76□□□□□ -0.37
RNF4-215ENST00000511843 PDIK1LQ8N165 341 aa12.76□□□□□ -0.37
RNF4-215ENST00000511843 RAB42Q8N4Z0 105 aa12.76□□□□□ -0.37
RNF4-215ENST00000511843 OR2L3Q8NG85 312 aa12.76□□□□□ -0.37
RNF4-215ENST00000511843 MAGEC3Q8TD91 643 aa12.76□□□□□ -0.37
RNF4-215ENST00000511843 INPP5DQ92835 1189 aa12.76□□□□□ -0.37
RNF4-215ENST00000511843 RUNDC3BQ96NL0 473 aa12.76□□□□□ -0.37
RNF4-215ENST00000511843 TRIM55Q9BYV6 548 aa12.76□□□□□ -0.37
RNF4-215ENST00000511843 TRIM4Q9C037 500 aa12.76□□□□□ -0.37
RNF4-215ENST00000511843 CHRNA10Q9GZZ6 450 aa12.76□□□□□ -0.37
RNF4-215ENST00000511843 SLC25A18Q9H1K4 315 aa12.76□□□□□ -0.37
RNF4-215ENST00000511843 DPH5Q9H2P9 285 aa12.76□□□□□ -0.37
RNF4-215ENST00000511843 SLC6A20Q9NP91 592 aa12.76□□□□□ -0.37
RNF4-215ENST00000511843 SPATA7Q9P0W8 599 aa12.76□□□□□ -0.37
RNF4-215ENST00000511843 SNX7Q9UNH6 387 aa12.76□□□□□ -0.37
RNF4-215ENST00000511843 TEX264Q9Y6I9 313 aa12.76□□□□□ -0.37
RNF4-215ENST00000511843 BSNQ9UPA5 3926 aa12.76□□□□□ -0.37
RNF4-215ENST00000511843 SLC28A2O43868 658 aa12.75□□□□□ -0.37
RNF4-215ENST00000511843 VPS26AO75436 327 aa12.75□□□□□ -0.37
RNF4-215ENST00000511843 TTC4O95801 387 aa12.75□□□□□ -0.37
RNF4-215ENST00000511843 SLC16A8O95907 504 aa12.75□□□□□ -0.37
RNF4-215ENST00000511843 AHSGP02765 367 aa12.75□□□□□ -0.37
RNF4-215ENST00000511843 ERGP11308 486 aa12.75□□□□□ -0.37
RNF4-215ENST00000511843 CASQ1P31415 396 aa12.75□□□□□ -0.37
RNF4-215ENST00000511843 ARL4CP56559 192 aa12.75□□□□□ -0.37
RNF4-215ENST00000511843 PDIA2Q13087 525 aaKnown RBP12.75□□□□□ -0.37
RNF4-215ENST00000511843 NCF4Q15080 339 aa12.75□□□□□ -0.37
RNF4-215ENST00000511843 UGT8Q16880 541 aa12.75□□□□□ -0.37
RNF4-215ENST00000511843 TEDDM1Q5T9Z0 273 aa12.75□□□□□ -0.37
RNF4-215ENST00000511843 MLIPQ5VWP3 458 aa12.75□□□□□ -0.37
RNF4-215ENST00000511843 FRMPD2BQ6IN97 320 aa12.75□□□□□ -0.37
RNF4-215ENST00000511843 RHBDD2Q6NTF9 364 aa12.75□□□□□ -0.37
RNF4-215ENST00000511843 CYHR1Q6ZMK1 362 aa12.75□□□□□ -0.37
RNF4-215ENST00000511843 MBOAT1Q6ZNC8 495 aa12.75□□□□□ -0.37
RNF4-215ENST00000511843 CAPN12Q6ZSI9 719 aa12.75□□□□□ -0.37
RNF4-215ENST00000511843 SYVN1Q86TM6 617 aa12.75□□□□□ -0.37
RNF4-215ENST00000511843 METTL27Q8N6F8 245 aaPredicted RBP12.75□□□□□ -0.37
RNF4-215ENST00000511843 C9orf43Q8TAL5 461 aaPredicted RBP12.75□□□□□ -0.37
RNF4-215ENST00000511843 HMGCLL1Q8TB92 370 aa12.75□□□□□ -0.37
RNF4-215ENST00000511843 EEF1AKMT1Q8WVE0 214 aa12.75□□□□□ -0.37
RNF4-215ENST00000511843 ASB11Q8WXH4 323 aa12.75□□□□□ -0.37
RNF4-215ENST00000511843 ABHD17AQ96GS6 310 aa12.75□□□□□ -0.37
RNF4-215ENST00000511843 GBP5Q96PP8 586 aa12.75□□□□□ -0.37
RNF4-215ENST00000511843 DPH7Q9BTV6 452 aa12.75□□□□□ -0.37
RNF4-215ENST00000511843 NLNQ9BYT8 704 aa12.75□□□□□ -0.37
RNF4-215ENST00000511843 FAM117AQ9C073 453 aa12.75□□□□□ -0.37
RNF4-215ENST00000511843 ADNPQ9H2P0 1102 aa12.75□□□□□ -0.37
RNF4-215ENST00000511843 SYNPO2LQ9H987 977 aa12.75□□□□□ -0.37
RNF4-215ENST00000511843 FAM114A2Q9NRY5 505 aa12.75□□□□□ -0.37
RNF4-215ENST00000511843 TXLNGQ9NUQ3 528 aa12.75□□□□□ -0.37
RNF4-215ENST00000511843 INTS7Q9NVH2 962 aaKnown RBP12.75□□□□□ -0.37
RNF4-215ENST00000511843 STOX2Q9P2F5 926 aaPredicted RBP12.75□□□□□ -0.37
RNF4-215ENST00000511843 TRMT6Q9UJA5 497 aaKnown RBP12.75□□□□□ -0.37
RNF4-215ENST00000511843 ADAMTS6Q9UKP5 1117 aa12.75□□□□□ -0.37
RNF4-215ENST00000511843 TCFL5Q9UL49 500 aa12.75□□□□□ -0.37
RNF4-215ENST00000511843 TLN1Q9Y490 2541 aaKnown RBP12.75□□□□□ -0.37
RNF4-215ENST00000511843 MRFAP1Q9Y605 127 aa12.75□□□□□ -0.37
RNF4-215ENST00000511843 AP1M2Q9Y6Q5 423 aa12.75□□□□□ -0.37
RNF4-215ENST00000511843 LOC105369274A0A096LPK9 316 aa12.74□□□□□ -0.37
RNF4-215ENST00000511843 LOC102723532A0A0G2JNH3 316 aa12.74□□□□□ -0.37
RNF4-215ENST00000511843 A0A0J9YVX5 310 aa12.74□□□□□ -0.37
RNF4-215ENST00000511843 ARGFXA6NJG6 315 aa12.74□□□□□ -0.37
RNF4-215ENST00000511843 C9J4A7 227 aa12.74□□□□□ -0.37
RNF4-215ENST00000511843 RAD51CO43502 376 aa12.74□□□□□ -0.37
RNF4-215ENST00000511843 CNOT3O75175 753 aaKnown RBP12.74□□□□□ -0.37
RNF4-215ENST00000511843 PIAS1O75925 651 aa12.74□□□□□ -0.37
RNF4-215ENST00000511843 HBQ1P09105 142 aa12.74□□□□□ -0.37
RNF4-215ENST00000511843 RAB40ALP0C0E4 278 aa12.74□□□□□ -0.37
RNF4-215ENST00000511843 MPC1LP0DKB6 136 aa12.74□□□□□ -0.37
RNF4-215ENST00000511843 ITGAXP20702 1163 aa12.74□□□□□ -0.37
RNF4-215ENST00000511843 AGXTP21549 392 aa12.74□□□□□ -0.37
RNF4-215ENST00000511843 ALAS2P22557 587 aa12.74□□□□□ -0.37
RNF4-215ENST00000511843 RPA3P35244 121 aaPredicted RBP12.74□□□□□ -0.37
RNF4-215ENST00000511843 PNLIPRP1P54315 467 aa12.74□□□□□ -0.37
RNF4-215ENST00000511843 VSX2P58304 361 aaPredicted RBP12.74□□□□□ -0.37
RNF4-215ENST00000511843 ETF1P62495 437 aaKnown RBP12.74□□□□□ -0.37
RNF4-215ENST00000511843 STEAP4Q687X5 459 aa12.74□□□□□ -0.37
RNF4-215ENST00000511843 PAQR3Q6TCH7 311 aa12.74□□□□□ -0.37
RNF4-215ENST00000511843 TTLL10Q6ZVT0 673 aa12.74□□□□□ -0.37
RNF4-215ENST00000511843 NEK10Q6ZWH5 1172 aa12.74□□□□□ -0.37
RNF4-215ENST00000511843 UBE2R2Q712K3 238 aaPredicted RBP12.74□□□□□ -0.37
RNF4-215ENST00000511843 CNTN4Q8IWV2 1026 aa12.74□□□□□ -0.37
RNF4-215ENST00000511843 OR4N4Q8N0Y3 316 aa12.74□□□□□ -0.37
RNF4-215ENST00000511843 GPATCH11Q8N954 259 aa12.74□□□□□ -0.37
RNF4-215ENST00000511843 FBXO36Q8NEA4 188 aa12.74□□□□□ -0.37
RNF4-215ENST00000511843 SPATA4Q8NEY3 305 aa12.74□□□□□ -0.37
RNF4-215ENST00000511843 ADAMTS17Q8TE56 1095 aa12.74□□□□□ -0.37
RNF4-215ENST00000511843 ZNF480Q8WV37 535 aa12.74□□□□□ -0.37
RNF4-215ENST00000511843 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.74□□□□□ -0.37
RNF4-215ENST00000511843 SMPDL3AQ92484 453 aa12.74□□□□□ -0.37
RNF4-215ENST00000511843 DLG3Q92796 817 aa12.74□□□□□ -0.37
RNF4-215ENST00000511843 SELENOSQ9BQE4 189 aa12.74□□□□□ -0.37
RNF4-215ENST00000511843 NAT9Q9BTE0 207 aa12.74□□□□□ -0.37
RNF4-215ENST00000511843 NDC1Q9BTX1 674 aa12.74□□□□□ -0.37
RNF4-215ENST00000511843 RNF14Q9UBS8 474 aa12.74□□□□□ -0.37
RNF4-215ENST00000511843 NDOR1Q9UHB4 597 aa12.74□□□□□ -0.37
RNF4-215ENST00000511843 TAC3Q9UHF0 121 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 120.2 ms