RNA–Protein interactions for RNA: ENST00000511667.5

CLDND1-224, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-224ENST00000511667 EIF3FO00303 357 aaPredicted RBP12.94□□□□□ -0.34
CLDND1-224ENST00000511667 MAP3K7O43318 606 aa12.94□□□□□ -0.34
CLDND1-224ENST00000511667 CNOT3O75175 753 aaKnown RBP12.94□□□□□ -0.34
CLDND1-224ENST00000511667 VPS4BO75351 444 aa12.94□□□□□ -0.34
CLDND1-224ENST00000511667 KATNA1O75449 491 aa12.94□□□□□ -0.34
CLDND1-224ENST00000511667 OR2B3O76000 313 aa12.94□□□□□ -0.34
CLDND1-224ENST00000511667 CYP2A7P20853 494 aa12.94□□□□□ -0.34
CLDND1-224ENST00000511667 GABRB3P28472 473 aa12.94□□□□□ -0.34
CLDND1-224ENST00000511667 GRIA3P42263 894 aa12.94□□□□□ -0.34
CLDND1-224ENST00000511667 SKIV2L2P42285 1042 aaKnown RBP12.94□□□□□ -0.34
CLDND1-224ENST00000511667 SLC1A2P43004 574 aa12.94□□□□□ -0.34
CLDND1-224ENST00000511667 RPS15P62841 145 aaKnown RBP12.94□□□□□ -0.34
CLDND1-224ENST00000511667 CTBP1Q13363 440 aa12.94□□□□□ -0.34
CLDND1-224ENST00000511667 ARHGAP19Q14CB8 494 aa12.94□□□□□ -0.34
CLDND1-224ENST00000511667 NCF4Q15080 339 aa12.94□□□□□ -0.34
CLDND1-224ENST00000511667 MRPL14Q6P1L8 145 aaKnown RBP12.94□□□□□ -0.34
CLDND1-224ENST00000511667 SYDE1Q6ZW31 735 aaPredicted RBP12.94□□□□□ -0.34
CLDND1-224ENST00000511667 IGDCC3Q8IVU1 814 aa12.94□□□□□ -0.34
CLDND1-224ENST00000511667 FAM20CQ8IXL6 584 aa12.94□□□□□ -0.34
CLDND1-224ENST00000511667 SRRM1Q8IYB3 904 aaKnown RBP12.94□□□□□ -0.34
CLDND1-224ENST00000511667 LRRC56Q8IYG6 542 aaPredicted RBP12.94□□□□□ -0.34
CLDND1-224ENST00000511667 ENDOVQ8N8Q3 282 aaKnown RBP12.94□□□□□ -0.34
CLDND1-224ENST00000511667 C2CD4AQ8NCU7 369 aaPredicted RBP12.94□□□□□ -0.34
CLDND1-224ENST00000511667 ASB11Q8WXH4 323 aa12.94□□□□□ -0.34
CLDND1-224ENST00000511667 EBNA1BP2Q99848 306 aaKnown RBP12.94□□□□□ -0.34
CLDND1-224ENST00000511667 DHRS4Q9BTZ2 278 aa12.94□□□□□ -0.34
CLDND1-224ENST00000511667 SLC22A11Q9NSA0 550 aa12.94□□□□□ -0.34
CLDND1-224ENST00000511667 PYCARDQ9ULZ3 195 aa12.94□□□□□ -0.34
CLDND1-224ENST00000511667 VPS4AQ9UN37 437 aa12.94□□□□□ -0.34
CLDND1-224ENST00000511667 RUVBL2Q9Y230 463 aaKnown RBP12.94□□□□□ -0.34
CLDND1-224ENST00000511667 DHRS7Q9Y394 339 aa12.94□□□□□ -0.34
CLDND1-224ENST00000511667 COMMD10Q9Y6G5 202 aa12.94□□□□□ -0.34
CLDND1-224ENST00000511667 CCDC88CQ9P219 2028 aa12.94□□□□□ -0.34
CLDND1-224ENST00000511667 CDC14CA4D256 554 aa12.93□□□□□ -0.34
CLDND1-224ENST00000511667 OR2A25A4D2G3 310 aa12.93□□□□□ -0.34
CLDND1-224ENST00000511667 K7EM74 188 aa12.93□□□□□ -0.34
CLDND1-224ENST00000511667 ZSCAN9O15535 394 aaPredicted RBP12.93□□□□□ -0.34
CLDND1-224ENST00000511667 CTSVO60911 334 aa12.93□□□□□ -0.34
CLDND1-224ENST00000511667 CBSLP0DN79 551 aa12.93□□□□□ -0.34
CLDND1-224ENST00000511667 PGAM1P18669 254 aa12.93□□□□□ -0.34
CLDND1-224ENST00000511667 CBSP35520 551 aa12.93□□□□□ -0.34
CLDND1-224ENST00000511667 BDKRB1P46663 353 aa12.93□□□□□ -0.34
CLDND1-224ENST00000511667 UQCRFS1P47985 274 aa12.93□□□□□ -0.34
CLDND1-224ENST00000511667 TERF1P54274 439 aa12.93□□□□□ -0.34
CLDND1-224ENST00000511667 RELAQ04206 551 aa12.93□□□□□ -0.34
CLDND1-224ENST00000511667 KLRB1Q12918 225 aa12.93□□□□□ -0.34
CLDND1-224ENST00000511667 FRG1Q14331 258 aaKnown RBP12.93□□□□□ -0.34
CLDND1-224ENST00000511667 CRYMQ14894 314 aa12.93□□□□□ -0.34
CLDND1-224ENST00000511667 DEFB110Q30KQ9 67 aa12.93□□□□□ -0.34
CLDND1-224ENST00000511667 PTCHD3Q3KNS1 767 aa12.93□□□□□ -0.34
CLDND1-224ENST00000511667 STEAP4Q687X5 459 aa12.93□□□□□ -0.34
CLDND1-224ENST00000511667 CASC4Q6P4E1 433 aa12.93□□□□□ -0.34
CLDND1-224ENST00000511667 FIGLAQ6QHK4 219 aa12.93□□□□□ -0.34
CLDND1-224ENST00000511667 MAMDC2Q7Z304 686 aaPredicted RBP12.93□□□□□ -0.34
CLDND1-224ENST00000511667 PCGF5Q86SE9 256 aa12.93□□□□□ -0.34
CLDND1-224ENST00000511667 MCATQ8IVS2 390 aaKnown RBP12.93□□□□□ -0.34
CLDND1-224ENST00000511667 GPR135Q8IZ08 494 aa12.93□□□□□ -0.34
CLDND1-224ENST00000511667 OR2L3Q8NG85 312 aa12.93□□□□□ -0.34
CLDND1-224ENST00000511667 OR9A1PQ8NGU1 263 aa12.93□□□□□ -0.34
CLDND1-224ENST00000511667 CFAP61Q8NHU2 1237 aa12.93□□□□□ -0.34
CLDND1-224ENST00000511667 CD200R1Q8TD46 325 aa12.93□□□□□ -0.34
CLDND1-224ENST00000511667 MAGEC3Q8TD91 643 aa12.93□□□□□ -0.34
CLDND1-224ENST00000511667 NAT9Q9BTE0 207 aa12.93□□□□□ -0.34
CLDND1-224ENST00000511667 TRIM55Q9BYV6 548 aa12.93□□□□□ -0.34
CLDND1-224ENST00000511667 CIDEBQ9UHD4 219 aa12.93□□□□□ -0.34
CLDND1-224ENST00000511667 FBXO5Q9UKT4 447 aa12.93□□□□□ -0.34
CLDND1-224ENST00000511667 PCDHGA9Q9Y5G4 932 aaKnown RBP12.93□□□□□ -0.34
CLDND1-224ENST00000511667 CSMD1Q96PZ7 3565 aa12.92□□□□□ -0.34
CLDND1-224ENST00000511667 ZFHX3Q15911 3703 aa12.92□□□□□ -0.34
CLDND1-224ENST00000511667 IGKV1-8A0A0C4DH67 115 aa12.92□□□□□ -0.34
CLDND1-224ENST00000511667 SMAPO00193 183 aa12.92□□□□□ -0.34
CLDND1-224ENST00000511667 RFPL1O75677 317 aa12.92□□□□□ -0.34
CLDND1-224ENST00000511667 HAUS5O94927 633 aa12.92□□□□□ -0.34
CLDND1-224ENST00000511667 TTC4O95801 387 aa12.92□□□□□ -0.34
CLDND1-224ENST00000511667 F7P08709 466 aaPredicted RBP12.92□□□□□ -0.34
CLDND1-224ENST00000511667 MPC1LP0DKB6 136 aa12.92□□□□□ -0.34
CLDND1-224ENST00000511667 ENO3P13929 434 aaPredicted RBP12.92□□□□□ -0.34
CLDND1-224ENST00000511667 CHRM3P20309 590 aa12.92□□□□□ -0.34
CLDND1-224ENST00000511667 DHX9Q08211 1270 aaKnown RBP12.92□□□□□ -0.34
CLDND1-224ENST00000511667 FASTKQ14296 549 aaKnown RBP12.92□□□□□ -0.34
CLDND1-224ENST00000511667 MORF4L2Q15014 288 aa12.92□□□□□ -0.34
CLDND1-224ENST00000511667 KLHL38Q2WGJ6 581 aa12.92□□□□□ -0.34
CLDND1-224ENST00000511667 LACTB2Q53H82 288 aaPredicted RBP12.92□□□□□ -0.34
CLDND1-224ENST00000511667 FAM69BQ5VUD6 431 aa12.92□□□□□ -0.34
CLDND1-224ENST00000511667 YOD1Q5VVQ6 348 aaPredicted RBP12.92□□□□□ -0.34
CLDND1-224ENST00000511667 HIBCHQ6NVY1 386 aaPredicted RBP12.92□□□□□ -0.34
CLDND1-224ENST00000511667 CNSTQ6PJW8 725 aa12.92□□□□□ -0.34
CLDND1-224ENST00000511667 RNF44Q7L0R7 432 aa12.92□□□□□ -0.34
CLDND1-224ENST00000511667 SPNS2Q8IVW8 549 aa12.92□□□□□ -0.34
CLDND1-224ENST00000511667 ARHGEF39Q8N4T4 335 aa12.92□□□□□ -0.34
CLDND1-224ENST00000511667 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.92□□□□□ -0.34
CLDND1-224ENST00000511667 CALML6Q8TD86 181 aa12.92□□□□□ -0.34
CLDND1-224ENST00000511667 CLIP3Q96DZ5 547 aa12.92□□□□□ -0.34
CLDND1-224ENST00000511667 FAM167BQ9BTA0 163 aa12.92□□□□□ -0.34
CLDND1-224ENST00000511667 AARSD1Q9BTE6 412 aaKnown RBP12.92□□□□□ -0.34
CLDND1-224ENST00000511667 SLC26A1Q9H2B4 701 aa12.92□□□□□ -0.34
CLDND1-224ENST00000511667 FBXO6Q9NRD1 293 aaPredicted RBP12.92□□□□□ -0.34
CLDND1-224ENST00000511667 C20orf96Q9NUD7 363 aaPredicted RBP12.92□□□□□ -0.34
CLDND1-224ENST00000511667 TLK1Q9UKI8 766 aa12.92□□□□□ -0.34
CLDND1-224ENST00000511667 SLC39A10Q9ULF5 831 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms