RNA–Protein interactions for RNA: ENST00000511439.5

TOPBP1-208, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 1,142 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-208ENST00000511439 BSNQ9UPA5 3926 aa3.49□□□□□ -1.85
TOPBP1-208ENST00000511439 PDZD2O15018 2839 aa3.49□□□□□ -1.85
TOPBP1-208ENST00000511439 COL4A2P08572 1712 aa3.49□□□□□ -1.85
TOPBP1-208ENST00000511439 UTP20O75691 2785 aaKnown RBP3.49□□□□□ -1.85
TOPBP1-208ENST00000511439 ANKHD1Q8IWZ3 2542 aaKnown RBP3.48□□□□□ -1.85
TOPBP1-208ENST00000511439 ATXN2Q99700 1313 aaKnown RBP3.48□□□□□ -1.85
TOPBP1-208ENST00000511439 NUP205Q92621 2012 aa3.48□□□□□ -1.85
TOPBP1-208ENST00000511439 HIVEP1P15822 2718 aa3.48□□□□□ -1.85
TOPBP1-208ENST00000511439 HIVEP3Q5T1R4 2406 aa3.48□□□□□ -1.85
TOPBP1-208ENST00000511439 A8MZ25 164 aa3.48□□□□□ -1.85
TOPBP1-208ENST00000511439 AKR1B15C9JRZ8 316 aaPredicted RBP3.48□□□□□ -1.85
TOPBP1-208ENST00000511439 K7ENP7 123 aa3.48□□□□□ -1.85
TOPBP1-208ENST00000511439 AP3D1O14617 1153 aa3.48□□□□□ -1.85
TOPBP1-208ENST00000511439 VILLO15195 856 aa3.48□□□□□ -1.85
TOPBP1-208ENST00000511439 HCRTR2O43614 444 aa3.48□□□□□ -1.85
TOPBP1-208ENST00000511439 PLRG1O43660 514 aaKnown RBP3.48□□□□□ -1.85
TOPBP1-208ENST00000511439 SLC25A12O75746 678 aa3.48□□□□□ -1.85
TOPBP1-208ENST00000511439 LGALS2P05162 132 aa3.48□□□□□ -1.85
TOPBP1-208ENST00000511439 IGHV4-30-4P0DP06 118 aa3.48□□□□□ -1.85
TOPBP1-208ENST00000511439 FCGR1AP12314 374 aa3.48□□□□□ -1.85
TOPBP1-208ENST00000511439 BDNFP23560 247 aa3.48□□□□□ -1.85
TOPBP1-208ENST00000511439 GDI1P31150 447 aa3.48□□□□□ -1.85
TOPBP1-208ENST00000511439 SEC61A1P61619 476 aaKnown RBP3.48□□□□□ -1.85
TOPBP1-208ENST00000511439 ECT2LQ008S8 904 aa3.48□□□□□ -1.85
TOPBP1-208ENST00000511439 CALD1Q05682 793 aaKnown RBP3.48□□□□□ -1.85
TOPBP1-208ENST00000511439 PRKG2Q13237 762 aa3.48□□□□□ -1.85
TOPBP1-208ENST00000511439 DHX34Q14147 1143 aaKnown RBP3.48□□□□□ -1.85
TOPBP1-208ENST00000511439 HSDL1Q3SXM5 330 aa3.48□□□□□ -1.85
TOPBP1-208ENST00000511439 CDONQ4KMG0 1287 aa3.48□□□□□ -1.85
TOPBP1-208ENST00000511439 XKR9Q5GH70 373 aa3.48□□□□□ -1.85
TOPBP1-208ENST00000511439 FHL5Q5TD97 284 aa3.48□□□□□ -1.85
TOPBP1-208ENST00000511439 LYSMD4Q5XG99 296 aa3.48□□□□□ -1.85
TOPBP1-208ENST00000511439 NADSYN1Q6IA69 706 aa3.48□□□□□ -1.85
TOPBP1-208ENST00000511439 GLDNQ6ZMI3 551 aaPredicted RBP3.48□□□□□ -1.85
TOPBP1-208ENST00000511439 DSELQ8IZU8 1212 aa3.48□□□□□ -1.85
TOPBP1-208ENST00000511439 PGBD5Q8N414 524 aa3.48□□□□□ -1.85
TOPBP1-208ENST00000511439 OR14L1PQ8NHC6 308 aa3.48□□□□□ -1.85
TOPBP1-208ENST00000511439 SETD7Q8WTS6 366 aaKnown RBP3.48□□□□□ -1.85
TOPBP1-208ENST00000511439 DEPDC1BQ8WUY9 529 aa3.48□□□□□ -1.85
TOPBP1-208ENST00000511439 TMED6Q8WW62 240 aa3.48□□□□□ -1.85
TOPBP1-208ENST00000511439 DNAJB3Q8WWF6 145 aa3.48□□□□□ -1.85
TOPBP1-208ENST00000511439 KCNE4Q8WWG9 221 aa3.48□□□□□ -1.85
TOPBP1-208ENST00000511439 RSPH1Q8WYR4 309 aa3.48□□□□□ -1.85
TOPBP1-208ENST00000511439 NR4A3Q92570 626 aa3.48□□□□□ -1.85
TOPBP1-208ENST00000511439 RND1Q92730 232 aa3.48□□□□□ -1.85
TOPBP1-208ENST00000511439 IGSF21Q96ID5 467 aa3.48□□□□□ -1.85
TOPBP1-208ENST00000511439 C1orf74Q96LT6 269 aa3.48□□□□□ -1.85
TOPBP1-208ENST00000511439 ACOX2Q99424 681 aa3.48□□□□□ -1.85
TOPBP1-208ENST00000511439 SEPT5Q99719 369 aaPredicted RBP3.48□□□□□ -1.85
TOPBP1-208ENST00000511439 SEMA3CQ99985 751 aa3.48□□□□□ -1.85
TOPBP1-208ENST00000511439 PLA2G2FQ9BZM2 168 aa3.48□□□□□ -1.85
TOPBP1-208ENST00000511439 SPRY4Q9C004 299 aa3.48□□□□□ -1.85
TOPBP1-208ENST00000511439 IL25Q9H293 177 aa3.48□□□□□ -1.85
TOPBP1-208ENST00000511439 SYNCQ9H7C4 482 aa3.48□□□□□ -1.85
TOPBP1-208ENST00000511439 C17orf75Q9HAS0 396 aa3.48□□□□□ -1.85
TOPBP1-208ENST00000511439 HAUS2Q9NVX0 235 aa3.48□□□□□ -1.85
TOPBP1-208ENST00000511439 MCM9Q9NXL9 1143 aa3.48□□□□□ -1.85
TOPBP1-208ENST00000511439 GDE1Q9NZC3 331 aa3.48□□□□□ -1.85
TOPBP1-208ENST00000511439 TUBE1Q9UJT0 475 aa3.48□□□□□ -1.85
TOPBP1-208ENST00000511439 GPR34Q9UPC5 381 aa3.48□□□□□ -1.85
TOPBP1-208ENST00000511439 TRPV2Q9Y5S1 764 aa3.48□□□□□ -1.85
TOPBP1-208ENST00000511439 MAU2Q9Y6X3 613 aa3.48□□□□□ -1.85
TOPBP1-208ENST00000511439 NBEAL1Q6ZS30 2694 aa3.47□□□□□ -1.85
TOPBP1-208ENST00000511439 SVILO95425 2214 aa3.47□□□□□ -1.85
TOPBP1-208ENST00000511439 AGAP14A8MT82 685 aa3.47□□□□□ -1.85
TOPBP1-208ENST00000511439 BTBD18B2RXH4 712 aa3.47□□□□□ -1.85
TOPBP1-208ENST00000511439 SOCS6O14544 535 aa3.47□□□□□ -1.85
TOPBP1-208ENST00000511439 VCYO14598 125 aa3.47□□□□□ -1.85
TOPBP1-208ENST00000511439 ZNF263O14978 683 aa3.47□□□□□ -1.85
TOPBP1-208ENST00000511439 TEX28O15482 410 aa3.47□□□□□ -1.85
TOPBP1-208ENST00000511439 SYNCRIPO60506 623 aaKnown RBP3.47□□□□□ -1.85
TOPBP1-208ENST00000511439 NDUFS3O75489 264 aa3.47□□□□□ -1.85
TOPBP1-208ENST00000511439 JRKO75564 520 aa3.47□□□□□ -1.85
TOPBP1-208ENST00000511439 GJB3O75712 270 aa3.47□□□□□ -1.85
TOPBP1-208ENST00000511439 ICAM1P05362 532 aa3.47□□□□□ -1.85
TOPBP1-208ENST00000511439 ZNF853P0CG23 659 aa3.47□□□□□ -1.85
TOPBP1-208ENST00000511439 PSMC3P17980 439 aa3.47□□□□□ -1.85
TOPBP1-208ENST00000511439 ALOX12P18054 663 aa3.47□□□□□ -1.85
TOPBP1-208ENST00000511439 BCKDHBP21953 392 aa3.47□□□□□ -1.85
TOPBP1-208ENST00000511439 SSTR2P30874 369 aa3.47□□□□□ -1.85
TOPBP1-208ENST00000511439 PSMB10P40306 273 aa3.47□□□□□ -1.85
TOPBP1-208ENST00000511439 IL15P40933 162 aaPredicted RBP3.47□□□□□ -1.85
TOPBP1-208ENST00000511439 GARSP41250 739 aaKnown RBP3.47□□□□□ -1.85
TOPBP1-208ENST00000511439 CLCN3P51790 818 aa3.47□□□□□ -1.85
TOPBP1-208ENST00000511439 NTHL1P78549 312 aa3.47□□□□□ -1.85
TOPBP1-208ENST00000511439 RPL36AP83881 106 aaKnown RBP3.47□□□□□ -1.85
TOPBP1-208ENST00000511439 KIF5AQ12840 1032 aa3.47□□□□□ -1.85
TOPBP1-208ENST00000511439 PDE1CQ14123 709 aaPredicted RBP3.47□□□□□ -1.85
TOPBP1-208ENST00000511439 ADIPOQQ15848 244 aa3.47□□□□□ -1.85
TOPBP1-208ENST00000511439 SETMARQ53H47 684 aaPredicted RBP3.47□□□□□ -1.85
TOPBP1-208ENST00000511439 PAPPA-AS1Q5QFB9 102 aa3.47□□□□□ -1.85
TOPBP1-208ENST00000511439 GKAP1Q5VSY0 366 aaPredicted RBP3.47□□□□□ -1.85
TOPBP1-208ENST00000511439 SIGIRRQ6IA17 410 aa3.47□□□□□ -1.85
TOPBP1-208ENST00000511439 JADE1Q6IE81 842 aa3.47□□□□□ -1.85
TOPBP1-208ENST00000511439 TMEM154Q6P9G4 183 aa3.47□□□□□ -1.85
TOPBP1-208ENST00000511439 SPNS3Q6ZMD2 512 aa3.47□□□□□ -1.85
TOPBP1-208ENST00000511439 DPPA4Q7L190 304 aa3.47□□□□□ -1.85
TOPBP1-208ENST00000511439 TMEM173Q86WV6 379 aaPredicted RBP3.47□□□□□ -1.85
TOPBP1-208ENST00000511439 RALGPS2Q86X27 583 aaPredicted RBP3.47□□□□□ -1.85
TOPBP1-208ENST00000511439 ARID3BQ8IVW6 561 aaPredicted RBP3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms