RNA–Protein interactions for RNA: ENST00000511040.5

DDX41-212, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 721 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-212ENST00000511040 SNRNP27Q8WVK2 155 aaKnown RBP13.44□□□□□ -0.26
DDX41-212ENST00000511040 SMPDL3AQ92484 453 aa13.44□□□□□ -0.26
DDX41-212ENST00000511040 SEC14L1Q92503 715 aa13.44□□□□□ -0.26
DDX41-212ENST00000511040 MR1Q95460 341 aa13.44□□□□□ -0.26
DDX41-212ENST00000511040 CLIP3Q96DZ5 547 aa13.44□□□□□ -0.26
DDX41-212ENST00000511040 VPS39Q96JC1 886 aa13.44□□□□□ -0.26
DDX41-212ENST00000511040 SLC7A5P2Q9GIP4 190 aa13.44□□□□□ -0.26
DDX41-212ENST00000511040 RHOJQ9H4E5 214 aa13.44□□□□□ -0.26
DDX41-212ENST00000511040 ACTR5Q9H9F9 607 aaPredicted RBP13.44□□□□□ -0.26
DDX41-212ENST00000511040 SYTL2Q9HCH5 934 aa13.44□□□□□ -0.26
DDX41-212ENST00000511040 LRRC4CQ9HCJ2 640 aa13.44□□□□□ -0.26
DDX41-212ENST00000511040 LHX9Q9NQ69 397 aa13.44□□□□□ -0.26
DDX41-212ENST00000511040 INTS7Q9NVH2 962 aaKnown RBP13.44□□□□□ -0.26
DDX41-212ENST00000511040 IKZF3Q9UKT9 509 aa13.44□□□□□ -0.26
DDX41-212ENST00000511040 PLCL2Q9UPR0 1127 aa13.44□□□□□ -0.26
DDX41-212ENST00000511040 PDE10AQ9Y233 779 aa13.44□□□□□ -0.26
DDX41-212ENST00000511040 FAM159BA6NKW6 160 aa13.43□□□□□ -0.26
DDX41-212ENST00000511040 E7EQ34 232 aa13.43□□□□□ -0.26
DDX41-212ENST00000511040 NKX2-8O15522 239 aa13.43□□□□□ -0.26
DDX41-212ENST00000511040 ZNF749O43361 778 aa13.43□□□□□ -0.26
DDX41-212ENST00000511040 FAM155BO75949 473 aa13.43□□□□□ -0.26
DDX41-212ENST00000511040 MT-ND3P03897 115 aa13.43□□□□□ -0.26
DDX41-212ENST00000511040 C8GP07360 202 aa13.43□□□□□ -0.26
DDX41-212ENST00000511040 MSL3P1P0C860 447 aa13.43□□□□□ -0.26
DDX41-212ENST00000511040 ARHGAP19Q14CB8 494 aa13.43□□□□□ -0.26
DDX41-212ENST00000511040 PHKG1Q16816 387 aa13.43□□□□□ -0.26
DDX41-212ENST00000511040 PTCHD3Q3KNS1 767 aa13.43□□□□□ -0.26
DDX41-212ENST00000511040 KBTBD12Q3ZCT8 623 aa13.43□□□□□ -0.26
DDX41-212ENST00000511040 UBAP2Q5T6F2 1119 aaKnown RBP13.43□□□□□ -0.26
DDX41-212ENST00000511040 ATP1A1-AS1Q5TC04 95 aa13.43□□□□□ -0.26
DDX41-212ENST00000511040 LRRC8EQ6NSJ5 796 aa13.43□□□□□ -0.26
DDX41-212ENST00000511040 CEP97Q8IW35 865 aa13.43□□□□□ -0.26
DDX41-212ENST00000511040 GPR135Q8IZ08 494 aa13.43□□□□□ -0.26
DDX41-212ENST00000511040 ZNF655Q8N720 491 aaPredicted RBP13.43□□□□□ -0.26
DDX41-212ENST00000511040 PPM1NQ8N819 430 aa13.43□□□□□ -0.26
DDX41-212ENST00000511040 FBXO15Q8NCQ5 510 aaPredicted RBP13.43□□□□□ -0.26
DDX41-212ENST00000511040 MCOLN3Q8TDD5 553 aa13.43□□□□□ -0.26
DDX41-212ENST00000511040 FBF1Q8TES7 1133 aa13.43□□□□□ -0.26
DDX41-212ENST00000511040 CDKL2Q92772 493 aa13.43□□□□□ -0.26
DDX41-212ENST00000511040 ALKBH8Q96BT7 664 aaKnown RBP13.43□□□□□ -0.26
DDX41-212ENST00000511040 BBC3Q96PG8 261 aaPredicted RBP13.43□□□□□ -0.26
DDX41-212ENST00000511040 MCMBPQ9BTE3 642 aa13.43□□□□□ -0.26
DDX41-212ENST00000511040 SLC12A9Q9BXP2 914 aa13.43□□□□□ -0.26
DDX41-212ENST00000511040 PHACTR1Q9C0D0 580 aa13.43□□□□□ -0.26
DDX41-212ENST00000511040 CHRNA10Q9GZZ6 450 aa13.43□□□□□ -0.26
DDX41-212ENST00000511040 CAB39LQ9H9S4 337 aa13.43□□□□□ -0.26
DDX41-212ENST00000511040 SLC6A20Q9NP91 592 aa13.43□□□□□ -0.26
DDX41-212ENST00000511040 STARD5Q9NSY2 213 aa13.43□□□□□ -0.26
DDX41-212ENST00000511040 NSMCE4AQ9NXX6 385 aa13.43□□□□□ -0.26
DDX41-212ENST00000511040 EURLQ9NYK6 297 aa13.43□□□□□ -0.26
DDX41-212ENST00000511040 TXNDC16Q9P2K2 825 aa13.43□□□□□ -0.26
DDX41-212ENST00000511040 TAC3Q9UHF0 121 aa13.43□□□□□ -0.26
DDX41-212ENST00000511040 MTO1Q9Y2Z2 717 aaKnown RBP13.43□□□□□ -0.26
DDX41-212ENST00000511040 ZNF891A8MT65 544 aaPredicted RBP13.42□□□□□ -0.26
DDX41-212ENST00000511040 E7ENX8 843 aa13.42□□□□□ -0.26
DDX41-212ENST00000511040 CTSVO60911 334 aa13.42□□□□□ -0.26
DDX41-212ENST00000511040 C1QAP02745 245 aa13.42□□□□□ -0.26
DDX41-212ENST00000511040 GSTA2P09210 222 aa13.42□□□□□ -0.26
DDX41-212ENST00000511040 TCN2P20062 427 aa13.42□□□□□ -0.26
DDX41-212ENST00000511040 IMPA1P29218 277 aa13.42□□□□□ -0.26
DDX41-212ENST00000511040 CMPK1P30085 196 aa13.42□□□□□ -0.26
DDX41-212ENST00000511040 HSD17B2P37059 387 aa13.42□□□□□ -0.26
DDX41-212ENST00000511040 TAP2Q03519 686 aa13.42□□□□□ -0.26
DDX41-212ENST00000511040 DNASE1L3Q13609 305 aa13.42□□□□□ -0.26
DDX41-212ENST00000511040 THEMIS2Q5TEJ8 643 aa13.42□□□□□ -0.26
DDX41-212ENST00000511040 C1orf189Q5VU69 101 aa13.42□□□□□ -0.26
DDX41-212ENST00000511040 C16orf46Q6P387 395 aa13.42□□□□□ -0.26
DDX41-212ENST00000511040 CEP112Q8N8E3 955 aa13.42□□□□□ -0.26
DDX41-212ENST00000511040 LRRN4CLQ8ND94 238 aa13.42□□□□□ -0.26
DDX41-212ENST00000511040 STARD8Q92502 1023 aa13.42□□□□□ -0.26
DDX41-212ENST00000511040 MRRFQ96E11 262 aaKnown RBP13.42□□□□□ -0.26
DDX41-212ENST00000511040 SLC45A3Q96JT2 553 aa13.42□□□□□ -0.26
DDX41-212ENST00000511040 CPNE1Q99829 537 aa13.42□□□□□ -0.26
DDX41-212ENST00000511040 DPH7Q9BTV6 452 aa13.42□□□□□ -0.26
DDX41-212ENST00000511040 UNKQ9C0B0 810 aaKnown RBP13.42□□□□□ -0.26
DDX41-212ENST00000511040 CHST8Q9H2A9 424 aa13.42□□□□□ -0.26
DDX41-212ENST00000511040 PARVBQ9HBI1 364 aa13.42□□□□□ -0.26
DDX41-212ENST00000511040 MRPS30Q9NP92 439 aaKnown RBP13.42□□□□□ -0.26
DDX41-212ENST00000511040 PCMTD2Q9NV79 361 aa13.42□□□□□ -0.26
DDX41-212ENST00000511040 STOX2Q9P2F5 926 aaPredicted RBP13.42□□□□□ -0.26
DDX41-212ENST00000511040 PCDHB3Q9Y5E6 796 aa13.42□□□□□ -0.26
DDX41-212ENST00000511040 MGAQ8IWI9 3026 aa13.42□□□□□ -0.26
DDX41-212ENST00000511040 ANKRD12Q6UB98 2062 aa13.41□□□□□ -0.26
DDX41-212ENST00000511040 ZFYVE26Q68DK2 2539 aa13.41□□□□□ -0.26
DDX41-212ENST00000511040 PCM1Q15154 2024 aa13.41□□□□□ -0.26
DDX41-212ENST00000511040 A0A0J9YVX5 310 aa13.41□□□□□ -0.26
DDX41-212ENST00000511040 NPEPPSL1A6NEC2 478 aa13.41□□□□□ -0.26
DDX41-212ENST00000511040 ZNF839A8K0R7 811 aa13.41□□□□□ -0.26
DDX41-212ENST00000511040 H3BMH7 237 aa13.41□□□□□ -0.26
DDX41-212ENST00000511040 MEN1O00255 615 aa13.41□□□□□ -0.26
DDX41-212ENST00000511040 TERTO14746 1132 aaKnown RBP13.41□□□□□ -0.26
DDX41-212ENST00000511040 SLC16A5O15375 505 aa13.41□□□□□ -0.26
DDX41-212ENST00000511040 ZSCAN9O15535 394 aaPredicted RBP13.41□□□□□ -0.26
DDX41-212ENST00000511040 PHGDHO43175 533 aaKnown RBP13.41□□□□□ -0.26
DDX41-212ENST00000511040 FKBP9O95302 570 aa13.41□□□□□ -0.26
DDX41-212ENST00000511040 KLK3P07288 261 aaPredicted RBP13.41□□□□□ -0.26
DDX41-212ENST00000511040 ZNF37AP17032 561 aaPredicted RBP13.41□□□□□ -0.26
DDX41-212ENST00000511040 STX2P32856 288 aa13.41□□□□□ -0.26
DDX41-212ENST00000511040 RORAP35398 523 aa13.41□□□□□ -0.26
DDX41-212ENST00000511040 GP5P40197 560 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms