RNA–Protein interactions for RNA: ENST00000509468.1

KDM3B-206, Transcript of lysine demethylase 3B, humanhuman

TSL 5

Gene KDM3B, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-206ENST00000509468 CNOT3O75175 753 aaKnown RBP12.1□□□□□ -0.47
KDM3B-206ENST00000509468 UMODP07911 640 aa12.1□□□□□ -0.47
KDM3B-206ENST00000509468 CMPK1P30085 196 aa12.1□□□□□ -0.47
KDM3B-206ENST00000509468 HSD17B2P37059 387 aa12.1□□□□□ -0.47
KDM3B-206ENST00000509468 UQCRFS1P47985 274 aa12.1□□□□□ -0.47
KDM3B-206ENST00000509468 NKG7Q16617 165 aa12.1□□□□□ -0.47
KDM3B-206ENST00000509468 TYSND1Q2T9J0 566 aa12.1□□□□□ -0.47
KDM3B-206ENST00000509468 ANKRD20A4Q4UJ75 823 aa12.1□□□□□ -0.47
KDM3B-206ENST00000509468 WASHC2DQ5SRD0 308 aa12.1□□□□□ -0.47
KDM3B-206ENST00000509468 CNSTQ6PJW8 725 aa12.1□□□□□ -0.47
KDM3B-206ENST00000509468 LRRC8AQ8IWT6 810 aa12.1□□□□□ -0.47
KDM3B-206ENST00000509468 OR2L3Q8NG85 312 aa12.1□□□□□ -0.47
KDM3B-206ENST00000509468 OR2A1Q8NGT9 310 aa12.1□□□□□ -0.47
KDM3B-206ENST00000509468 LPGAT1Q92604 370 aa12.1□□□□□ -0.47
KDM3B-206ENST00000509468 ZNF304Q9HCX3 659 aa12.1□□□□□ -0.47
KDM3B-206ENST00000509468 FAM114A2Q9NRY5 505 aa12.1□□□□□ -0.47
KDM3B-206ENST00000509468 SEMA3GQ9NS98 782 aa12.1□□□□□ -0.47
KDM3B-206ENST00000509468 SYBUQ9NX95 663 aa12.1□□□□□ -0.47
KDM3B-206ENST00000509468 UTP6Q9NYH9 597 aaKnown RBP12.1□□□□□ -0.47
KDM3B-206ENST00000509468 SPATA7Q9P0W8 599 aa12.1□□□□□ -0.47
KDM3B-206ENST00000509468 ZC3H7BQ9UGR2 993 aaKnown RBP12.1□□□□□ -0.47
KDM3B-206ENST00000509468 CRYL1Q9Y2S2 319 aa12.1□□□□□ -0.47
KDM3B-206ENST00000509468 NFS1Q9Y697 457 aa12.1□□□□□ -0.47
KDM3B-206ENST00000509468 FAM169AQ9Y6X4 670 aa12.1□□□□□ -0.47
KDM3B-206ENST00000509468 PCSK5Q92824 1860 aa12.1□□□□□ -0.47
KDM3B-206ENST00000509468 SDR42E2A6NKP2 422 aa12.09□□□□□ -0.47
KDM3B-206ENST00000509468 ZNF839A8K0R7 811 aa12.09□□□□□ -0.47
KDM3B-206ENST00000509468 GOLGA8KD6RF30 607 aa12.09□□□□□ -0.47
KDM3B-206ENST00000509468 E5RI56 91 aa12.09□□□□□ -0.47
KDM3B-206ENST00000509468 GOLGA8TH3BQL2 631 aa12.09□□□□□ -0.47
KDM3B-206ENST00000509468 PHF2O75151 1096 aa12.09□□□□□ -0.47
KDM3B-206ENST00000509468 MLNP12872 115 aa12.09□□□□□ -0.47
KDM3B-206ENST00000509468 OGNP20774 298 aaKnown RBP12.09□□□□□ -0.47
KDM3B-206ENST00000509468 ITGA3P26006 1051 aa12.09□□□□□ -0.47
KDM3B-206ENST00000509468 ARNTP27540 789 aa12.09□□□□□ -0.47
KDM3B-206ENST00000509468 CXCR5P32302 372 aa12.09□□□□□ -0.47
KDM3B-206ENST00000509468 OR1D4P47884 311 aa12.09□□□□□ -0.47
KDM3B-206ENST00000509468 CARSP49589 748 aaKnown RBP12.09□□□□□ -0.47
KDM3B-206ENST00000509468 EMP3P54852 163 aa12.09□□□□□ -0.47
KDM3B-206ENST00000509468 VSX2P58304 361 aaPredicted RBP12.09□□□□□ -0.47
KDM3B-206ENST00000509468 OCA2Q04671 838 aa12.09□□□□□ -0.47
KDM3B-206ENST00000509468 GPS1Q13098 491 aa12.09□□□□□ -0.47
KDM3B-206ENST00000509468 ARHGAP19Q14CB8 494 aa12.09□□□□□ -0.47
KDM3B-206ENST00000509468 CCSMST1Q4G0I0 132 aa12.09□□□□□ -0.47
KDM3B-206ENST00000509468 CTSL3PQ5NE16 218 aa12.09□□□□□ -0.47
KDM3B-206ENST00000509468 PRAMEF13Q5VWM6 474 aa12.09□□□□□ -0.47
KDM3B-206ENST00000509468 KIAA0930Q6ICG6 404 aaPredicted RBP12.09□□□□□ -0.47
KDM3B-206ENST00000509468 NEPROQ6NW34 567 aa12.09□□□□□ -0.47
KDM3B-206ENST00000509468 PRMT9Q6P2P2 845 aa12.09□□□□□ -0.47
KDM3B-206ENST00000509468 FBXO42Q6P3S6 717 aa12.09□□□□□ -0.47
KDM3B-206ENST00000509468 CASC4Q6P4E1 433 aa12.09□□□□□ -0.47
KDM3B-206ENST00000509468 CES3Q6UWW8 571 aa12.09□□□□□ -0.47
KDM3B-206ENST00000509468 OR9A1PQ8NGU1 263 aa12.09□□□□□ -0.47
KDM3B-206ENST00000509468 SSC4DQ8WTU2 575 aa12.09□□□□□ -0.47
KDM3B-206ENST00000509468 COG1Q8WTW3 980 aa12.09□□□□□ -0.47
KDM3B-206ENST00000509468 SNRNP40Q96DI7 357 aaKnown RBP12.09□□□□□ -0.47
KDM3B-206ENST00000509468 MIPEPQ99797 713 aa12.09□□□□□ -0.47
KDM3B-206ENST00000509468 ILKAPQ9H0C8 392 aaPredicted RBP12.09□□□□□ -0.47
KDM3B-206ENST00000509468 INTS10Q9NVR2 710 aaKnown RBP12.09□□□□□ -0.47
KDM3B-206ENST00000509468 LUZP4Q9P127 313 aa12.09□□□□□ -0.47
KDM3B-206ENST00000509468 SAMD15Q9P1V8 674 aa12.09□□□□□ -0.47
KDM3B-206ENST00000509468 KLHL42Q9P2K6 505 aa12.09□□□□□ -0.47
KDM3B-206ENST00000509468 CDC14AQ9UNH5 594 aa12.09□□□□□ -0.47
KDM3B-206ENST00000509468 SHANK1Q9Y566 2161 aa12.09□□□□□ -0.47
KDM3B-206ENST00000509468 PTPN13Q12923 2485 aa12.08□□□□□ -0.48
KDM3B-206ENST00000509468 A0A0J9YVX5 310 aa12.08□□□□□ -0.48
KDM3B-206ENST00000509468 FAM237BA0A1B0GVD1 139 aa12.08□□□□□ -0.48
KDM3B-206ENST00000509468 VSTM2BA6NLU5 285 aa12.08□□□□□ -0.48
KDM3B-206ENST00000509468 CTSVO60911 334 aa12.08□□□□□ -0.48
KDM3B-206ENST00000509468 NIPSNAP2O75323 286 aa12.08□□□□□ -0.48
KDM3B-206ENST00000509468 AVILO75366 819 aa12.08□□□□□ -0.48
KDM3B-206ENST00000509468 DDAH2O95865 285 aa12.08□□□□□ -0.48
KDM3B-206ENST00000509468 KRT14P02533 472 aa12.08□□□□□ -0.48
KDM3B-206ENST00000509468 PKMP14618 531 aaKnown RBP12.08□□□□□ -0.48
KDM3B-206ENST00000509468 MCM3P25205 808 aa12.08□□□□□ -0.48
KDM3B-206ENST00000509468 MAGEA6P43360 314 aa12.08□□□□□ -0.48
KDM3B-206ENST00000509468 BDKRB1P46663 353 aa12.08□□□□□ -0.48
KDM3B-206ENST00000509468 GBX1Q14549 363 aa12.08□□□□□ -0.48
KDM3B-206ENST00000509468 MUM1Q2TAK8 710 aa12.08□□□□□ -0.48
KDM3B-206ENST00000509468 EIF2S3LQ2VIR3 472 aaKnown RBP12.08□□□□□ -0.48
KDM3B-206ENST00000509468 TTLL9Q3SXZ7 439 aa12.08□□□□□ -0.48
KDM3B-206ENST00000509468 C4orf17Q53FE4 359 aa12.08□□□□□ -0.48
KDM3B-206ENST00000509468 AGAP7PQ5VUJ5 663 aa12.08□□□□□ -0.48
KDM3B-206ENST00000509468 KIRREL2Q6UWL6 708 aa12.08□□□□□ -0.48
KDM3B-206ENST00000509468 NEK10Q6ZWH5 1172 aa12.08□□□□□ -0.48
KDM3B-206ENST00000509468 CILP2Q8IUL8 1156 aa12.08□□□□□ -0.48
KDM3B-206ENST00000509468 CISD2Q8N5K1 135 aaKnown RBP12.08□□□□□ -0.48
KDM3B-206ENST00000509468 PRELID2Q8N945 189 aa12.08□□□□□ -0.48
KDM3B-206ENST00000509468 PRR7Q8TB68 274 aa12.08□□□□□ -0.48
KDM3B-206ENST00000509468 SMPDL3AQ92484 453 aa12.08□□□□□ -0.48
KDM3B-206ENST00000509468 PBKQ96KB5 322 aa12.08□□□□□ -0.48
KDM3B-206ENST00000509468 AGAP4Q96P64 663 aa12.08□□□□□ -0.48
KDM3B-206ENST00000509468 SPSB2Q99619 263 aa12.08□□□□□ -0.48
KDM3B-206ENST00000509468 ZNF282Q9UDV7 671 aaPredicted RBP12.08□□□□□ -0.48
KDM3B-206ENST00000509468 COPG1Q9Y678 874 aaKnown RBP12.08□□□□□ -0.48
KDM3B-206ENST00000509468 ESPL1Q14674 2120 aa12.07□□□□□ -0.48
KDM3B-206ENST00000509468 PRRC2CQ9Y520 2896 aaKnown RBP12.07□□□□□ -0.48
KDM3B-206ENST00000509468 LOC105369274A0A096LPK9 316 aa12.07□□□□□ -0.48
KDM3B-206ENST00000509468 LOC102723532A0A0G2JNH3 316 aa12.07□□□□□ -0.48
KDM3B-206ENST00000509468 A0A1W2PPV9 198 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms