RNA–Protein interactions for RNA: ENST00000508531.1

PDLIM5-211, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-211ENST00000508531 SNX25Q9H3E2 840 aa4.49□□□□□ -1.69
PDLIM5-211ENST00000508531 DBNDD1Q9H9R9 158 aa4.49□□□□□ -1.69
PDLIM5-211ENST00000508531 NEK6Q9HC98 313 aa4.49□□□□□ -1.69
PDLIM5-211ENST00000508531 RAVER2Q9HCJ3 691 aaKnown RBP4.49□□□□□ -1.69
PDLIM5-211ENST00000508531 MLXIPLQ9NP71 852 aa4.49□□□□□ -1.69
PDLIM5-211ENST00000508531 SLCO1B3Q9NPD5 702 aa4.49□□□□□ -1.69
PDLIM5-211ENST00000508531 C20orf96Q9NUD7 363 aaPredicted RBP4.49□□□□□ -1.69
PDLIM5-211ENST00000508531 GIMAP4Q9NUV9 329 aa4.49□□□□□ -1.69
PDLIM5-211ENST00000508531 DDX56Q9NY93 547 aaKnown RBP4.49□□□□□ -1.69
PDLIM5-211ENST00000508531 PKD2L2Q9NZM6 624 aa4.49□□□□□ -1.69
PDLIM5-211ENST00000508531 ZIM2Q9NZV7 527 aa4.49□□□□□ -1.69
PDLIM5-211ENST00000508531 AFF4Q9UHB7 1163 aaKnown RBP4.49□□□□□ -1.69
PDLIM5-211ENST00000508531 IPO11Q9UI26 975 aaKnown RBP4.49□□□□□ -1.69
PDLIM5-211ENST00000508531 ZNF221Q9UK13 617 aa4.49□□□□□ -1.69
PDLIM5-211ENST00000508531 ACAD8Q9UKU7 415 aa4.49□□□□□ -1.69
PDLIM5-211ENST00000508531 POMPQ9Y244 141 aa4.49□□□□□ -1.69
PDLIM5-211ENST00000508531 GRIP1Q9Y3R0 1128 aa4.49□□□□□ -1.69
PDLIM5-211ENST00000508531 CSNK1G3Q9Y6M4 447 aa4.49□□□□□ -1.69
PDLIM5-211ENST00000508531 EYSQ5T1H1 3165 aa4.49□□□□□ -1.69
PDLIM5-211ENST00000508531 BCORQ6W2J9 1755 aa4.49□□□□□ -1.69
PDLIM5-211ENST00000508531 CLUHO75153 1309 aa4.48□□□□□ -1.69
PDLIM5-211ENST00000508531 ANKRD36CQ5JPF3 1778 aa4.48□□□□□ -1.69
PDLIM5-211ENST00000508531 ARFGEF2Q9Y6D5 1785 aa4.48□□□□□ -1.69
PDLIM5-211ENST00000508531 TTC28Q96AY4 2481 aa4.48□□□□□ -1.69
PDLIM5-211ENST00000508531 PNMA8CA0A1B0GUJ8 204 aa4.48□□□□□ -1.69
PDLIM5-211ENST00000508531 OR5K3A6NET4 321 aa4.48□□□□□ -1.69
PDLIM5-211ENST00000508531 GOLGA8JA6NMD2 632 aa4.48□□□□□ -1.69
PDLIM5-211ENST00000508531 FAM227AF5H4B4 570 aa4.48□□□□□ -1.69
PDLIM5-211ENST00000508531 PI4K2BG5E9Z4 385 aa4.48□□□□□ -1.69
PDLIM5-211ENST00000508531 H3BMQ9 156 aa4.48□□□□□ -1.69
PDLIM5-211ENST00000508531 INPPL1O15357 1258 aa4.48□□□□□ -1.69
PDLIM5-211ENST00000508531 PRAMEF2O60811 474 aa4.48□□□□□ -1.69
PDLIM5-211ENST00000508531 TMCC2O75069 709 aa4.48□□□□□ -1.69
PDLIM5-211ENST00000508531 ZNF254O75437 659 aa4.48□□□□□ -1.69
PDLIM5-211ENST00000508531 B3GALNT1O75752 331 aa4.48□□□□□ -1.69
PDLIM5-211ENST00000508531 SNAPC5O75971 98 aa4.48□□□□□ -1.69
PDLIM5-211ENST00000508531 TRIM16O95361 564 aa4.48□□□□□ -1.69
PDLIM5-211ENST00000508531 PLEKHA8P1O95397 391 aa4.48□□□□□ -1.69
PDLIM5-211ENST00000508531 ECDO95905 644 aaPredicted RBP4.48□□□□□ -1.69
PDLIM5-211ENST00000508531 CCNE2O96020 404 aa4.48□□□□□ -1.69
PDLIM5-211ENST00000508531 CD4P01730 458 aa4.48□□□□□ -1.69
PDLIM5-211ENST00000508531 FCGR1AP12314 374 aa4.48□□□□□ -1.69
PDLIM5-211ENST00000508531 PRKACAP17612 351 aa4.48□□□□□ -1.69
PDLIM5-211ENST00000508531 DDX5P17844 614 aaKnown RBP4.48□□□□□ -1.69
PDLIM5-211ENST00000508531 TNFAIP3P21580 790 aa4.48□□□□□ -1.69
PDLIM5-211ENST00000508531 BDNFP23560 247 aa4.48□□□□□ -1.69
PDLIM5-211ENST00000508531 CNTFP26441 200 aa4.48□□□□□ -1.69
PDLIM5-211ENST00000508531 PON1P27169 355 aa4.48□□□□□ -1.69
PDLIM5-211ENST00000508531 GSTM2P28161 218 aa4.48□□□□□ -1.69
PDLIM5-211ENST00000508531 RBL1P28749 1068 aa4.48□□□□□ -1.69
PDLIM5-211ENST00000508531 CASP1P29466 404 aa4.48□□□□□ -1.69
PDLIM5-211ENST00000508531 IDUAP35475 653 aa4.48□□□□□ -1.69
PDLIM5-211ENST00000508531 ADD2P35612 726 aa4.48□□□□□ -1.69
PDLIM5-211ENST00000508531 GP5P40197 560 aa4.48□□□□□ -1.69
PDLIM5-211ENST00000508531 LEPRP48357 1165 aaKnown RBP4.48□□□□□ -1.69
PDLIM5-211ENST00000508531 ARL4CP56559 192 aa4.48□□□□□ -1.69
PDLIM5-211ENST00000508531 NME5P56597 212 aa4.48□□□□□ -1.69
PDLIM5-211ENST00000508531 KDSRQ06136 332 aa4.48□□□□□ -1.69
PDLIM5-211ENST00000508531 SF3A3Q12874 501 aaKnown RBP eCLIP4.48□□□□□ -1.69
PDLIM5-211ENST00000508531 EPS8Q12929 822 aa4.48□□□□□ -1.69
PDLIM5-211ENST00000508531 SLC12A1Q13621 1099 aa4.48□□□□□ -1.69
PDLIM5-211ENST00000508531 RFTN1Q14699 578 aaPredicted RBP4.48□□□□□ -1.69
PDLIM5-211ENST00000508531 CDK10Q15131 360 aa4.48□□□□□ -1.69
PDLIM5-211ENST00000508531 SF3B4Q15427 424 aaKnown RBP eCLIP4.48□□□□□ -1.69
PDLIM5-211ENST00000508531 CCNG2Q16589 344 aa4.48□□□□□ -1.69
PDLIM5-211ENST00000508531 ST3GAL2Q16842 350 aa4.48□□□□□ -1.69
PDLIM5-211ENST00000508531 LPCAT4Q643R3 524 aa4.48□□□□□ -1.69
PDLIM5-211ENST00000508531 ANKRD26P1Q6NSI1 321 aa4.48□□□□□ -1.69
PDLIM5-211ENST00000508531 UGT3A1Q6NUS8 523 aa4.48□□□□□ -1.69
PDLIM5-211ENST00000508531 METTL2BQ6P1Q9 378 aaKnown RBP4.48□□□□□ -1.69
PDLIM5-211ENST00000508531 ZNF549Q6P9A3 640 aa4.48□□□□□ -1.69
PDLIM5-211ENST00000508531 TTC33Q6PID6 262 aaPredicted RBP4.48□□□□□ -1.69
PDLIM5-211ENST00000508531 ABRAXAS1Q6UWZ7 409 aa4.48□□□□□ -1.69
PDLIM5-211ENST00000508531 CLEC9AQ6UXN8 241 aa4.48□□□□□ -1.69
PDLIM5-211ENST00000508531 ZNF793Q6ZN11 406 aa4.48□□□□□ -1.69
PDLIM5-211ENST00000508531 KIAA0408Q6ZU52 694 aa4.48□□□□□ -1.69
PDLIM5-211ENST00000508531 STXBP4Q6ZWJ1 553 aa4.48□□□□□ -1.69
PDLIM5-211ENST00000508531 BEND5Q7L4P6 421 aa4.48□□□□□ -1.69
PDLIM5-211ENST00000508531 ZNF571Q7Z3V5 609 aaPredicted RBP4.48□□□□□ -1.69
PDLIM5-211ENST00000508531 TFAP2DQ7Z6R9 452 aa4.48□□□□□ -1.69
PDLIM5-211ENST00000508531 CAMK1DQ8IU85 385 aa4.48□□□□□ -1.69
PDLIM5-211ENST00000508531 GALNT13Q8IUC8 556 aa4.48□□□□□ -1.69
PDLIM5-211ENST00000508531 TBC1D10CQ8IV04 446 aa4.48□□□□□ -1.69
PDLIM5-211ENST00000508531 ADGRF2Q8IZF7 708 aa4.48□□□□□ -1.69
PDLIM5-211ENST00000508531 BLIDQ8IZY5 108 aa4.48□□□□□ -1.69
PDLIM5-211ENST00000508531 CADM3Q8N126 398 aa4.48□□□□□ -1.69
PDLIM5-211ENST00000508531 ZCCHC7Q8N3Z6 543 aaKnown RBP4.48□□□□□ -1.69
PDLIM5-211ENST00000508531 BANPQ8N9N5 519 aa4.48□□□□□ -1.69
PDLIM5-211ENST00000508531 IL17REQ8NFR9 667 aa4.48□□□□□ -1.69
PDLIM5-211ENST00000508531 OR10Z1Q8NGY1 313 aa4.48□□□□□ -1.69
PDLIM5-211ENST00000508531 LHFPL5Q8TAF8 219 aa4.48□□□□□ -1.69
PDLIM5-211ENST00000508531 ENKURQ8TC29 256 aa4.48□□□□□ -1.69
PDLIM5-211ENST00000508531 PDCD6IPQ8WUM4 868 aaKnown RBP4.48□□□□□ -1.69
PDLIM5-211ENST00000508531 PYDC1Q8WXC3 89 aa4.48□□□□□ -1.69
PDLIM5-211ENST00000508531 HSPH1Q92598 858 aa4.48□□□□□ -1.69
PDLIM5-211ENST00000508531 SEPT8Q92599 483 aa4.48□□□□□ -1.69
PDLIM5-211ENST00000508531 STAMQ92783 540 aa4.48□□□□□ -1.69
PDLIM5-211ENST00000508531 ERLEC1Q96DZ1 483 aa4.48□□□□□ -1.69
PDLIM5-211ENST00000508531 DUS3LQ96G46 650 aaKnown RBP4.48□□□□□ -1.69
PDLIM5-211ENST00000508531 CEP170P1Q96L14 293 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms