RNA–Protein interactions for RNA: ENST00000508290.5

SFXN1-209, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-209ENST00000508290 C2orf54Q08AI8 447 aa19.11■□□□□ 0.65
SFXN1-209ENST00000508290 CUL1Q13616 776 aa19.11■□□□□ 0.65
SFXN1-209ENST00000508290 LINC00303Q3SY05 128 aa19.11■□□□□ 0.65
SFXN1-209ENST00000508290 CYHR1Q6ZMK1 362 aa19.11■□□□□ 0.65
SFXN1-209ENST00000508290 TAX1BP1Q86VP1 789 aa19.11■□□□□ 0.65
SFXN1-209ENST00000508290 MCATQ8IVS2 390 aaKnown RBP19.11■□□□□ 0.65
SFXN1-209ENST00000508290 CPNE9Q8IYJ1 553 aa19.11■□□□□ 0.65
SFXN1-209ENST00000508290 ZBED8Q8IZ13 594 aa19.11■□□□□ 0.65
SFXN1-209ENST00000508290 MYO1HQ8N1T3 1032 aa19.11■□□□□ 0.65
SFXN1-209ENST00000508290 SLC38A9Q8NBW4 561 aa19.11■□□□□ 0.65
SFXN1-209ENST00000508290 MCOLN3Q8TDD5 553 aa19.11■□□□□ 0.65
SFXN1-209ENST00000508290 PYROXD1Q8WU10 500 aa19.11■□□□□ 0.65
SFXN1-209ENST00000508290 WDR83Q9BRX9 315 aaKnown RBP19.11■□□□□ 0.65
SFXN1-209ENST00000508290 CHST8Q9H2A9 424 aa19.11■□□□□ 0.65
SFXN1-209ENST00000508290 TXLNGQ9NUQ3 528 aa19.11■□□□□ 0.65
SFXN1-209ENST00000508290 IRAK4Q9NWZ3 460 aa19.11■□□□□ 0.65
SFXN1-209ENST00000508290 GEMIN8Q9NWZ8 242 aaKnown RBP19.11■□□□□ 0.65
SFXN1-209ENST00000508290 MOCS1Q9NZB8 636 aa19.11■□□□□ 0.65
SFXN1-209ENST00000508290 CIDEBQ9UHD4 219 aa19.11■□□□□ 0.65
SFXN1-209ENST00000508290 PABPN1LA6NDY0 278 aaKnown RBP19.1■□□□□ 0.65
SFXN1-209ENST00000508290 SLC16A8O95907 504 aa19.1■□□□□ 0.65
SFXN1-209ENST00000508290 PRKAR1AP10644 381 aa19.1■□□□□ 0.65
SFXN1-209ENST00000508290 MCM3P25205 808 aa19.1■□□□□ 0.65
SFXN1-209ENST00000508290 GRIA3P42263 894 aa19.1■□□□□ 0.65
SFXN1-209ENST00000508290 IL2P60568 153 aa19.1■□□□□ 0.65
SFXN1-209ENST00000508290 PDAP1Q13442 181 aaKnown RBP19.1■□□□□ 0.65
SFXN1-209ENST00000508290 GRM7Q14831 915 aa19.1■□□□□ 0.65
SFXN1-209ENST00000508290 UGT8Q16880 541 aa19.1■□□□□ 0.65
SFXN1-209ENST00000508290 WHAMMP3Q1A5X7 153 aa19.1■□□□□ 0.65
SFXN1-209ENST00000508290 C16orf46Q6P387 395 aa19.1■□□□□ 0.65
SFXN1-209ENST00000508290 UBE2R2Q712K3 238 aaPredicted RBP19.1■□□□□ 0.65
SFXN1-209ENST00000508290 CYS1Q717R9 158 aa19.1■□□□□ 0.65
SFXN1-209ENST00000508290 C2orf73Q8N5S3 287 aaPredicted RBP19.1■□□□□ 0.65
SFXN1-209ENST00000508290 CDKL2Q92772 493 aa19.1■□□□□ 0.65
SFXN1-209ENST00000508290 PWWP2AQ96N64 755 aa19.1■□□□□ 0.65
SFXN1-209ENST00000508290 PKP4Q99569 1192 aa19.1■□□□□ 0.65
SFXN1-209ENST00000508290 NDNQ99608 321 aa19.1■□□□□ 0.65
SFXN1-209ENST00000508290 PCBD2Q9H0N5 130 aa19.1■□□□□ 0.65
SFXN1-209ENST00000508290 TSR3Q9UJK0 312 aaKnown RBP19.1■□□□□ 0.65
SFXN1-209ENST00000508290 VWA7Q9Y334 891 aa19.1■□□□□ 0.65
SFXN1-209ENST00000508290 A0A1W2PPV9 198 aa19.09■□□□□ 0.65
SFXN1-209ENST00000508290 PIM1P11309 404 aaPredicted RBP19.09■□□□□ 0.65
SFXN1-209ENST00000508290 CCND1P24385 295 aa19.09■□□□□ 0.65
SFXN1-209ENST00000508290 HRH2P25021 359 aa19.09■□□□□ 0.65
SFXN1-209ENST00000508290 POLE2P56282 527 aa19.09■□□□□ 0.65
SFXN1-209ENST00000508290 DCDP81605 110 aaKnown RBP19.09■□□□□ 0.65
SFXN1-209ENST00000508290 LY6DQ14210 128 aa19.09■□□□□ 0.65
SFXN1-209ENST00000508290 NCF4Q15080 339 aa19.09■□□□□ 0.65
SFXN1-209ENST00000508290 FAM214AQ32MH5 1076 aa19.09■□□□□ 0.65
SFXN1-209ENST00000508290 HP1BP3Q5SSJ5 553 aaPredicted RBP19.09■□□□□ 0.65
SFXN1-209ENST00000508290 TRMT10BQ6PF06 316 aaKnown RBP19.09■□□□□ 0.65
SFXN1-209ENST00000508290 PIWIL4Q7Z3Z4 852 aaKnown RBP19.09■□□□□ 0.65
SFXN1-209ENST00000508290 ANKMY2Q8IV38 441 aa19.09■□□□□ 0.65
SFXN1-209ENST00000508290 ZNF480Q8WV37 535 aa19.09■□□□□ 0.65
SFXN1-209ENST00000508290 CCDC138Q96M89 665 aa19.09■□□□□ 0.65
SFXN1-209ENST00000508290 C16orf45Q96MC5 204 aaPredicted RBP19.09■□□□□ 0.65
SFXN1-209ENST00000508290 ZNF285Q96NJ3 590 aa19.09■□□□□ 0.65
SFXN1-209ENST00000508290 MIPEPQ99797 713 aa19.09■□□□□ 0.65
SFXN1-209ENST00000508290 DPH5Q9H2P9 285 aa19.09■□□□□ 0.65
SFXN1-209ENST00000508290 OR2A25A4D2G3 310 aa19.08■□□□□ 0.64
SFXN1-209ENST00000508290 E7ENX8 843 aa19.08■□□□□ 0.64
SFXN1-209ENST00000508290 SYF2O95926 243 aaKnown RBP19.08■□□□□ 0.64
SFXN1-209ENST00000508290 HIST1H2AGP0C0S8 130 aaPredicted RBP19.08■□□□□ 0.64
SFXN1-209ENST00000508290 HIST1H2ADP20671 130 aa19.08■□□□□ 0.64
SFXN1-209ENST00000508290 TAP2Q03519 686 aa19.08■□□□□ 0.64
SFXN1-209ENST00000508290 PRDX1Q06830 199 aaKnown RBP19.08■□□□□ 0.64
SFXN1-209ENST00000508290 ERV3-1Q14264 604 aa19.08■□□□□ 0.64
SFXN1-209ENST00000508290 DEFB110Q30KQ9 67 aa19.08■□□□□ 0.64
SFXN1-209ENST00000508290 HECTD2Q5U5R9 776 aa19.08■□□□□ 0.64
SFXN1-209ENST00000508290 ZNF385CQ66K41 422 aaPredicted RBP19.08■□□□□ 0.64
SFXN1-209ENST00000508290 FCRL6Q6DN72 434 aa19.08■□□□□ 0.64
SFXN1-209ENST00000508290 FAM199XQ6PEV8 388 aaPredicted RBP19.08■□□□□ 0.64
SFXN1-209ENST00000508290 PAQR3Q6TCH7 311 aa19.08■□□□□ 0.64
SFXN1-209ENST00000508290 RNF44Q7L0R7 432 aa19.08■□□□□ 0.64
SFXN1-209ENST00000508290 GPATCH11Q8N954 259 aa19.08■□□□□ 0.64
SFXN1-209ENST00000508290 TTC29Q8NA56 475 aaPredicted RBP19.08■□□□□ 0.64
SFXN1-209ENST00000508290 EEF1AKMT1Q8WVE0 214 aa19.08■□□□□ 0.64
SFXN1-209ENST00000508290 ANKRD7Q92527 254 aa19.08■□□□□ 0.64
SFXN1-209ENST00000508290 PDLIM5Q96HC4 596 aaKnown RBP19.08■□□□□ 0.64
SFXN1-209ENST00000508290 VPS39Q96JC1 886 aa19.08■□□□□ 0.64
SFXN1-209ENST00000508290 HIST1H2AHQ96KK5 128 aa19.08■□□□□ 0.64
SFXN1-209ENST00000508290 HIST1H2AJQ99878 128 aa19.08■□□□□ 0.64
SFXN1-209ENST00000508290 SELENOSQ9BQE4 189 aa19.08■□□□□ 0.64
SFXN1-209ENST00000508290 H2AFJQ9BTM1 129 aa19.08■□□□□ 0.64
SFXN1-209ENST00000508290 TRIM54Q9BYV2 358 aa19.08■□□□□ 0.64
SFXN1-209ENST00000508290 PARVBQ9HBI1 364 aa19.08■□□□□ 0.64
SFXN1-209ENST00000508290 MRPS30Q9NP92 439 aaKnown RBP19.08■□□□□ 0.64
SFXN1-209ENST00000508290 GRHL1Q9NZI5 618 aa19.08■□□□□ 0.64
SFXN1-209ENST00000508290 SNX7Q9UNH6 387 aa19.08■□□□□ 0.64
SFXN1-209ENST00000508290 MRPS18BQ9Y676 258 aaKnown RBP19.08■□□□□ 0.64
SFXN1-209ENST00000508290 A0A1B0GX78 115 aa19.07■□□□□ 0.64
SFXN1-209ENST00000508290 FITM1A5D6W6 292 aa19.07■□□□□ 0.64
SFXN1-209ENST00000508290 F7P08709 466 aaPredicted RBP19.07■□□□□ 0.64
SFXN1-209ENST00000508290 ENO2P09104 434 aaPredicted RBP19.07■□□□□ 0.64
SFXN1-209ENST00000508290 FDXRP22570 491 aa19.07■□□□□ 0.64
SFXN1-209ENST00000508290 EMP3P54852 163 aa19.07■□□□□ 0.64
SFXN1-209ENST00000508290 CDKN2DP55273 166 aa19.07■□□□□ 0.64
SFXN1-209ENST00000508290 AP1S2P56377 157 aa19.07■□□□□ 0.64
SFXN1-209ENST00000508290 TIAL1Q01085 375 aaKnown RBP eCLIP19.07■□□□□ 0.64
SFXN1-209ENST00000508290 KCNAB2Q13303 367 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms