RNA–Protein interactions for RNA: ENST00000507401.2

SCN1A-207, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 3

Gene SCN1A, Length 711 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-207ENST00000507401 ATP1B2P14415 290 aaPredicted RBP7.81□□□□□ -1.16
SCN1A-207ENST00000507401 TYRP1P17643 537 aa7.81□□□□□ -1.16
SCN1A-207ENST00000507401 AKT1P31749 480 aa7.81□□□□□ -1.16
SCN1A-207ENST00000507401 CA5AP35218 305 aa7.81□□□□□ -1.16
SCN1A-207ENST00000507401 MAPK9P45984 424 aa7.81□□□□□ -1.16
SCN1A-207ENST00000507401 CAPZBP47756 277 aa7.81□□□□□ -1.16
SCN1A-207ENST00000507401 ZNF140P52738 457 aaPredicted RBP7.81□□□□□ -1.16
SCN1A-207ENST00000507401 AP2B1P63010 937 aa7.81□□□□□ -1.16
SCN1A-207ENST00000507401 GSTM4Q03013 218 aa7.81□□□□□ -1.16
SCN1A-207ENST00000507401 SEPT7Q16181 437 aaKnown RBP7.81□□□□□ -1.16
SCN1A-207ENST00000507401 PLA2G4EQ3MJ16 856 aa7.81□□□□□ -1.16
SCN1A-207ENST00000507401 CRTC2Q53ET0 693 aaPredicted RBP7.81□□□□□ -1.16
SCN1A-207ENST00000507401 SNAP47Q5SQN1 464 aa7.81□□□□□ -1.16
SCN1A-207ENST00000507401 KIAA1614Q5VZ46 1190 aa7.81□□□□□ -1.16
SCN1A-207ENST00000507401 AAGABQ6PD74 315 aa7.81□□□□□ -1.16
SCN1A-207ENST00000507401 LRRC74BQ6ZQY2 392 aa7.81□□□□□ -1.16
SCN1A-207ENST00000507401 FAM83HQ6ZRV2 1179 aaPredicted RBP7.81□□□□□ -1.16
SCN1A-207ENST00000507401 PRSS42Q7Z5A4 293 aa7.81□□□□□ -1.16
SCN1A-207ENST00000507401 ZNF605Q86T29 641 aa7.81□□□□□ -1.16
SCN1A-207ENST00000507401 EXOC3L1Q86VI1 746 aa7.81□□□□□ -1.16
SCN1A-207ENST00000507401 KMT5CQ86Y97 462 aa7.81□□□□□ -1.16
SCN1A-207ENST00000507401 NLGN4XQ8N0W4 816 aa7.81□□□□□ -1.16
SCN1A-207ENST00000507401 CARFQ8N187 725 aa7.81□□□□□ -1.16
SCN1A-207ENST00000507401 NXPE1Q8N323 547 aa7.81□□□□□ -1.16
SCN1A-207ENST00000507401 TMEM151AQ8N4L1 468 aa7.81□□□□□ -1.16
SCN1A-207ENST00000507401 IL22RA1Q8N6P7 574 aa7.81□□□□□ -1.16
SCN1A-207ENST00000507401 FAM71DQ8N9W8 422 aa7.81□□□□□ -1.16
SCN1A-207ENST00000507401 NLGN4YQ8NFZ3 816 aaPredicted RBP7.81□□□□□ -1.16
SCN1A-207ENST00000507401 TRPC4APQ8TEL6 797 aa7.81□□□□□ -1.16
SCN1A-207ENST00000507401 PMEPA1Q969W9 287 aa7.81□□□□□ -1.16
SCN1A-207ENST00000507401 ALKBH8Q96BT7 664 aaKnown RBP7.81□□□□□ -1.16
SCN1A-207ENST00000507401 DGCR14Q96DF8 476 aaKnown RBP7.81□□□□□ -1.16
SCN1A-207ENST00000507401 DCUN1D1Q96GG9 259 aa7.81□□□□□ -1.16
SCN1A-207ENST00000507401 CDKN2AIPNLQ96HQ2 116 aa7.81□□□□□ -1.16
SCN1A-207ENST00000507401 FCRL4Q96PJ5 515 aa7.81□□□□□ -1.16
SCN1A-207ENST00000507401 COPS8Q99627 209 aa7.81□□□□□ -1.16
SCN1A-207ENST00000507401 FAM118BQ9BPY3 351 aa7.81□□□□□ -1.16
SCN1A-207ENST00000507401 APOL2Q9BQE5 337 aa7.81□□□□□ -1.16
SCN1A-207ENST00000507401 BTBD10Q9BSF8 475 aa7.81□□□□□ -1.16
SCN1A-207ENST00000507401 SLC12A9Q9BXP2 914 aa7.81□□□□□ -1.16
SCN1A-207ENST00000507401 NMRK1Q9NWW6 199 aa7.81□□□□□ -1.16
SCN1A-207ENST00000507401 SIDT1Q9NXL6 827 aaKnown RBP7.81□□□□□ -1.16
SCN1A-207ENST00000507401 ZDHHC3Q9NYG2 299 aa7.81□□□□□ -1.16
SCN1A-207ENST00000507401 SMARCAL1Q9NZC9 954 aa7.81□□□□□ -1.16
SCN1A-207ENST00000507401 CRLS1Q9UJA2 301 aa7.81□□□□□ -1.16
SCN1A-207ENST00000507401 SH3GLB1Q9Y371 365 aa7.81□□□□□ -1.16
SCN1A-207ENST00000507401 TMED5Q9Y3A6 229 aa7.81□□□□□ -1.16
SCN1A-207ENST00000507401 KCTD3Q9Y597 815 aa7.81□□□□□ -1.16
SCN1A-207ENST00000507401 COLEC10Q9Y6Z7 277 aa7.81□□□□□ -1.16
SCN1A-207ENST00000507401 ZNF106Q9H2Y7 1883 aaKnown RBP7.81□□□□□ -1.16
SCN1A-207ENST00000507401 COL6A6A6NMZ7 2263 aa7.8□□□□□ -1.16
SCN1A-207ENST00000507401 IGLV3-16A0A075B6K0 115 aa7.8□□□□□ -1.16
SCN1A-207ENST00000507401 TRBV5-4A0A0C4DH59 114 aa7.8□□□□□ -1.16
SCN1A-207ENST00000507401 TLDC2A0PJX2 215 aa7.8□□□□□ -1.16
SCN1A-207ENST00000507401 MROH6A6NGR9 719 aa7.8□□□□□ -1.16
SCN1A-207ENST00000507401 SHISA8B8ZZ34 492 aa7.8□□□□□ -1.16
SCN1A-207ENST00000507401 B8ZZF3 427 aa7.8□□□□□ -1.16
SCN1A-207ENST00000507401 SGTAO43765 313 aa7.8□□□□□ -1.16
SCN1A-207ENST00000507401 RAD1O60671 282 aa7.8□□□□□ -1.16
SCN1A-207ENST00000507401 AP2A2O94973 939 aa7.8□□□□□ -1.16
SCN1A-207ENST00000507401 TGDSO95455 350 aa7.8□□□□□ -1.16
SCN1A-207ENST00000507401 AP2A1O95782 977 aa7.8□□□□□ -1.16
SCN1A-207ENST00000507401 PRB1P04280 392 aa7.8□□□□□ -1.16
SCN1A-207ENST00000507401 MTHFD1P11586 935 aaKnown RBP7.8□□□□□ -1.16
SCN1A-207ENST00000507401 FGF5P12034 268 aa7.8□□□□□ -1.16
SCN1A-207ENST00000507401 NELFEP18615 380 aaKnown RBP7.8□□□□□ -1.16
SCN1A-207ENST00000507401 ITGALP20701 1170 aa7.8□□□□□ -1.16
SCN1A-207ENST00000507401 NDUFS1P28331 727 aa7.8□□□□□ -1.16
SCN1A-207ENST00000507401 CRABP2P29373 138 aa7.8□□□□□ -1.16
SCN1A-207ENST00000507401 SERPINB4P48594 390 aa7.8□□□□□ -1.16
SCN1A-207ENST00000507401 RAP1GDS1P52306 607 aa7.8□□□□□ -1.16
SCN1A-207ENST00000507401 PLTPP55058 493 aa7.8□□□□□ -1.16
SCN1A-207ENST00000507401 GFERP55789 205 aa7.8□□□□□ -1.16
SCN1A-207ENST00000507401 PHEXP78562 749 aa7.8□□□□□ -1.16
SCN1A-207ENST00000507401 ABHD18Q0P651 414 aa7.8□□□□□ -1.16
SCN1A-207ENST00000507401 OLIG2Q13516 323 aa7.8□□□□□ -1.16
SCN1A-207ENST00000507401 NFE2L1Q14494 772 aa7.8□□□□□ -1.16
SCN1A-207ENST00000507401 PDK4Q16654 411 aa7.8□□□□□ -1.16
SCN1A-207ENST00000507401 CNPY1Q3B7I2 92 aa7.8□□□□□ -1.16
SCN1A-207ENST00000507401 LINC00303Q3SY05 128 aa7.8□□□□□ -1.16
SCN1A-207ENST00000507401 KBTBD12Q3ZCT8 623 aa7.8□□□□□ -1.16
SCN1A-207ENST00000507401 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.8□□□□□ -1.16
SCN1A-207ENST00000507401 DNAL1Q4LDG9 190 aa7.8□□□□□ -1.16
SCN1A-207ENST00000507401 SEL1L2Q5TEA6 688 aa7.8□□□□□ -1.16
SCN1A-207ENST00000507401 CACHD1Q5VU97 1274 aa7.8□□□□□ -1.16
SCN1A-207ENST00000507401 BORAQ6PGQ7 559 aa7.8□□□□□ -1.16
SCN1A-207ENST00000507401 CENPUQ71F23 418 aa7.8□□□□□ -1.16
SCN1A-207ENST00000507401 NET1Q7Z628 596 aaPredicted RBP7.8□□□□□ -1.16
SCN1A-207ENST00000507401 VASH2Q86V25 355 aa7.8□□□□□ -1.16
SCN1A-207ENST00000507401 CFAP206Q8IYR0 622 aa7.8□□□□□ -1.16
SCN1A-207ENST00000507401 ESX1Q8N693 406 aa7.8□□□□□ -1.16
SCN1A-207ENST00000507401 ZBTB8BQ8NAP8 495 aaPredicted RBP7.8□□□□□ -1.16
SCN1A-207ENST00000507401 OR13C4Q8NGS5 318 aa7.8□□□□□ -1.16
SCN1A-207ENST00000507401 STYXQ8WUJ0 223 aa7.8□□□□□ -1.16
SCN1A-207ENST00000507401 KIAA1143Q96AT1 154 aaPredicted RBP7.8□□□□□ -1.16
SCN1A-207ENST00000507401 SLC45A3Q96JT2 553 aa7.8□□□□□ -1.16
SCN1A-207ENST00000507401 TGM7Q96PF1 710 aa7.8□□□□□ -1.16
SCN1A-207ENST00000507401 BTBD9Q96Q07 612 aa7.8□□□□□ -1.16
SCN1A-207ENST00000507401 CD180Q99467 661 aa7.8□□□□□ -1.16
SCN1A-207ENST00000507401 TMEM121Q9BTD3 319 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms