RNA–Protein interactions for RNA: ENST00000502971.5

PTPN13-205, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 1 (best) BASIC

Gene PTPN13, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-205ENST00000502971 KIAA0040Q15053 153 aa21.32■■□□□ 1
PTPN13-205ENST00000502971 LAYNQ6UX15 382 aa21.32■■□□□ 1
PTPN13-205ENST00000502971 KIAA1324Q6UXG2 1013 aaKnown RBP21.32■■□□□ 1
PTPN13-205ENST00000502971 LRRC56Q8IYG6 542 aaPredicted RBP21.32■■□□□ 1
PTPN13-205ENST00000502971 SPDYE1Q8NFV5 336 aaPredicted RBP21.32■■□□□ 1
PTPN13-205ENST00000502971 ACTL8Q9H568 366 aa21.32■■□□□ 1
PTPN13-205ENST00000502971 TM7SF3Q9NS93 570 aa21.32■■□□□ 1
PTPN13-205ENST00000502971 PACSIN3Q9UKS6 424 aa21.32■■□□□ 1
PTPN13-205ENST00000502971 TMED5Q9Y3A6 229 aa21.32■■□□□ 1
PTPN13-205ENST00000502971 CEACAM5P06731 702 aa21.32■■□□□ 1
PTPN13-205ENST00000502971 ACPPP15309 386 aa21.32■■□□□ 1
PTPN13-205ENST00000502971 NDUFV2P19404 249 aa21.32■■□□□ 1
PTPN13-205ENST00000502971 CD22P20273 847 aa21.32■■□□□ 1
PTPN13-205ENST00000502971 MAT2AP31153 395 aaKnown RBP21.32■■□□□ 1
PTPN13-205ENST00000502971 GCKP35557 465 aa21.32■■□□□ 1
PTPN13-205ENST00000502971 PPP2CBP62714 309 aa21.32■■□□□ 1
PTPN13-205ENST00000502971 PPP2CAP67775 309 aa21.32■■□□□ 1
PTPN13-205ENST00000502971 SAMD4BQ5PRF9 694 aaKnown RBP21.32■■□□□ 1
PTPN13-205ENST00000502971 FAM9CQ8IZT9 166 aa21.32■■□□□ 1
PTPN13-205ENST00000502971 GLB1L3Q8NCI6 653 aaPredicted RBP21.32■■□□□ 1
PTPN13-205ENST00000502971 DENND6BQ8NEG7 585 aa21.32■■□□□ 1
PTPN13-205ENST00000502971 WDR20Q8TBZ3 569 aa21.32■■□□□ 1
PTPN13-205ENST00000502971 SETD7Q8WTS6 366 aaKnown RBP21.32■■□□□ 1
PTPN13-205ENST00000502971 ZBTB18Q99592 522 aa21.32■■□□□ 1
PTPN13-205ENST00000502971 S100A14Q9HCY8 104 aa21.32■■□□□ 1
PTPN13-205ENST00000502971 SUCOQ9UBS9 1254 aaKnown RBP21.32■■□□□ 1
PTPN13-205ENST00000502971 ANGPTL2Q9UKU9 493 aa21.32■■□□□ 1
PTPN13-205ENST00000502971 DYRK1BQ9Y463 629 aa21.32■■□□□ 1
PTPN13-205ENST00000502971 NPPAP01160 153 aa21.31■■□□□ 1
PTPN13-205ENST00000502971 HSD3B1P14060 373 aa21.31■■□□□ 1
PTPN13-205ENST00000502971 XRCC1P18887 633 aaPredicted RBP21.31■■□□□ 1
PTPN13-205ENST00000502971 HSD3B2P26439 372 aa21.31■■□□□ 1
PTPN13-205ENST00000502971 MAPK1P28482 360 aa21.31■■□□□ 1
PTPN13-205ENST00000502971 HSD17B2P37059 387 aa21.31■■□□□ 1
PTPN13-205ENST00000502971 TAP2Q03519 686 aa21.31■■□□□ 1
PTPN13-205ENST00000502971 TLR1Q15399 786 aa21.31■■□□□ 1
PTPN13-205ENST00000502971 USP39Q53GS9 565 aaKnown RBP21.31■■□□□ 1
PTPN13-205ENST00000502971 FAM124AQ86V42 546 aa21.31■■□□□ 1
PTPN13-205ENST00000502971 TRIM69Q86WT6 500 aa21.31■■□□□ 1
PTPN13-205ENST00000502971 LIX1Q8N485 282 aa21.31■■□□□ 1
PTPN13-205ENST00000502971 OR5K2Q8NHB8 316 aa21.31■■□□□ 1
PTPN13-205ENST00000502971 VPS33AQ96AX1 596 aa21.31■■□□□ 1
PTPN13-205ENST00000502971 LRRC58Q96CX6 371 aa21.31■■□□□ 1
PTPN13-205ENST00000502971 WDR34Q96EX3 536 aa21.31■■□□□ 1
PTPN13-205ENST00000502971 PRDM6Q9NQX0 595 aa21.31■■□□□ 1
PTPN13-205ENST00000502971 PCDHGA11Q9Y5H2 935 aa21.31■■□□□ 1
PTPN13-205ENST00000502971 TCRBV21S2A2A0A5A6 115 aa21.3■■□□□ 1
PTPN13-205ENST00000502971 SLC31A1O15431 190 aa21.3■■□□□ 1
PTPN13-205ENST00000502971 PI15O43692 258 aa21.3■■□□□ 1
PTPN13-205ENST00000502971 SLC35G4P0C7Q5 338 aa21.3■■□□□ 1
PTPN13-205ENST00000502971 PRPS2P11908 318 aa21.3■■□□□ 1
PTPN13-205ENST00000502971 NPPBP16860 134 aa21.3■■□□□ 1
PTPN13-205ENST00000502971 ARHGAP19Q14CB8 494 aa21.3■■□□□ 1
PTPN13-205ENST00000502971 SLCO4C1Q6ZQN7 724 aa21.3■■□□□ 1
PTPN13-205ENST00000502971 CHST15Q7LFX5 561 aaPredicted RBP21.3■■□□□ 1
PTPN13-205ENST00000502971 PHC3Q8NDX5 983 aa21.3■■□□□ 1
PTPN13-205ENST00000502971 OR5AR1Q8NGP9 310 aa21.3■■□□□ 1
PTPN13-205ENST00000502971 SLC26A7Q8TE54 656 aa21.3■■□□□ 1
PTPN13-205ENST00000502971 SCARF2Q96GP6 870 aaPredicted RBP21.3■■□□□ 1
PTPN13-205ENST00000502971 SLC45A3Q96JT2 553 aa21.3■■□□□ 1
PTPN13-205ENST00000502971 EHD1Q9H4M9 534 aa21.3■■□□□ 1
PTPN13-205ENST00000502971 CCDC177Q9NQR7 707 aaPredicted RBP21.3■■□□□ 1
PTPN13-205ENST00000502971 CD300AQ9UGN4 299 aa21.3■■□□□ 1
PTPN13-205ENST00000502971 KANSL1LA0AUZ9 987 aa21.29■■□□□ 1
PTPN13-205ENST00000502971 ASPDHA6ND91 283 aa21.29■■□□□ 1
PTPN13-205ENST00000502971 MAN2B1O00754 1011 aa21.29■■□□□ 1
PTPN13-205ENST00000502971 BCAS2O75934 225 aaPredicted RBP21.29■■□□□ 1
PTPN13-205ENST00000502971 ANP32DO95626 131 aa21.29■■□□□ 1
PTPN13-205ENST00000502971 FUCA1P04066 466 aa21.29■■□□□ 1
PTPN13-205ENST00000502971 VARSP26640 1264 aaKnown RBP21.29■■□□□ 1
PTPN13-205ENST00000502971 ZP2Q05996 745 aa21.29■■□□□ 1
PTPN13-205ENST00000502971 NFYCQ13952 458 aa21.29■■□□□ 1
PTPN13-205ENST00000502971 FLOT2Q14254 428 aa21.29■■□□□ 1
PTPN13-205ENST00000502971 SPATS1Q496A3 300 aa21.29■■□□□ 1
PTPN13-205ENST00000502971 C10orf62Q5T681 223 aaPredicted RBP21.29■■□□□ 1
PTPN13-205ENST00000502971 CAPRIN2Q6IMN6 1127 aaKnown RBP21.29■■□□□ 1
PTPN13-205ENST00000502971 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP21.29■■□□□ 1
PTPN13-205ENST00000502971 OR2T34Q8NGX1 318 aa21.29■■□□□ 1
PTPN13-205ENST00000502971 NEIL2Q969S2 332 aa21.29■■□□□ 1
PTPN13-205ENST00000502971 REPS1Q96D71 796 aa21.29■■□□□ 1
PTPN13-205ENST00000502971 ASB9Q96DX5 294 aa21.29■■□□□ 1
PTPN13-205ENST00000502971 METTL2AQ96IZ6 378 aaKnown RBP21.29■■□□□ 1
PTPN13-205ENST00000502971 DPY30Q9C005 99 aa21.29■■□□□ 1
PTPN13-205ENST00000502971 BTBD1Q9H0C5 482 aa21.29■■□□□ 1
PTPN13-205ENST00000502971 EBF2Q9HAK2 575 aa21.29■■□□□ 1
PTPN13-205ENST00000502971 BRF2Q9HAW0 419 aa21.29■■□□□ 1
PTPN13-205ENST00000502971 SGK2Q9HBY8 427 aa21.29■■□□□ 1
PTPN13-205ENST00000502971 FZD3Q9NPG1 666 aa21.29■■□□□ 1
PTPN13-205ENST00000502971 ABCD2Q9UBJ2 740 aa21.29■■□□□ 1
PTPN13-205ENST00000502971 PSMD13Q9UNM6 376 aa21.29■■□□□ 1
PTPN13-205ENST00000502971 LRRC72A6NJI9 287 aa21.29■■□□□ 1
PTPN13-205ENST00000502971 ZNF839A8K0R7 811 aa21.29■■□□□ 1
PTPN13-205ENST00000502971 FXYD1O00168 92 aa21.29■■□□□ 1
PTPN13-205ENST00000502971 ERGP11308 486 aa21.29■■□□□ 1
PTPN13-205ENST00000502971 BCKDHAP12694 445 aa21.29■■□□□ 1
PTPN13-205ENST00000502971 ACP5P13686 325 aa21.29■■□□□ 1
PTPN13-205ENST00000502971 GABRG2P18507 467 aa21.29■■□□□ 1
PTPN13-205ENST00000502971 TPMTP51580 245 aa21.29■■□□□ 1
PTPN13-205ENST00000502971 SLC7A2P52569 658 aa21.29■■□□□ 1
PTPN13-205ENST00000502971 KIAA1024LP59773 190 aa21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms