RNA–Protein interactions for RNA: ENST00000497580.5

GAPVD1-220, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 3,720 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-220ENST00000497580 NPR3P17342 541 aa12.74□□□□□ -0.37
GAPVD1-220ENST00000497580 DDCP20711 480 aa12.74□□□□□ -0.37
GAPVD1-220ENST00000497580 FKBP1AP62942 108 aaKnown RBP12.74□□□□□ -0.37
GAPVD1-220ENST00000497580 TAGLNQ01995 201 aaKnown RBP12.74□□□□□ -0.37
GAPVD1-220ENST00000497580 DBPQ10586 325 aaPredicted RBP12.74□□□□□ -0.37
GAPVD1-220ENST00000497580 SNTA1Q13424 505 aa12.74□□□□□ -0.37
GAPVD1-220ENST00000497580 POU4F3Q15319 338 aa12.74□□□□□ -0.37
GAPVD1-220ENST00000497580 PROX2Q3B8N5 592 aa12.74□□□□□ -0.37
GAPVD1-220ENST00000497580 FLYWCH1Q4VC44 716 aa12.74□□□□□ -0.37
GAPVD1-220ENST00000497580 DCAF15Q66K64 600 aa12.74□□□□□ -0.37
GAPVD1-220ENST00000497580 B3GALNT2Q8NCR0 500 aa12.74□□□□□ -0.37
GAPVD1-220ENST00000497580 OR10T2Q8NGX3 314 aa12.74□□□□□ -0.37
GAPVD1-220ENST00000497580 FCGR1BQ92637 280 aa12.74□□□□□ -0.37
GAPVD1-220ENST00000497580 GGHQ92820 318 aa12.74□□□□□ -0.37
GAPVD1-220ENST00000497580 PEX13Q92968 403 aa12.74□□□□□ -0.37
GAPVD1-220ENST00000497580 PDLIM5Q96HC4 596 aaKnown RBP12.74□□□□□ -0.37
GAPVD1-220ENST00000497580 DIRAS2Q96HU8 199 aa12.74□□□□□ -0.37
GAPVD1-220ENST00000497580 ACTL8Q9H568 366 aa12.74□□□□□ -0.37
GAPVD1-220ENST00000497580 IMPAD1Q9NX62 359 aa12.74□□□□□ -0.37
GAPVD1-220ENST00000497580 SIRT5Q9NXA8 310 aa12.74□□□□□ -0.37
GAPVD1-220ENST00000497580 SLC25A37Q9NYZ2 338 aa12.74□□□□□ -0.37
GAPVD1-220ENST00000497580 NUPL2O15504 423 aaKnown RBP12.74□□□□□ -0.37
GAPVD1-220ENST00000497580 OR1I1O60431 355 aa12.74□□□□□ -0.37
GAPVD1-220ENST00000497580 TLR5O60602 858 aa12.74□□□□□ -0.37
GAPVD1-220ENST00000497580 LRATO95237 230 aa12.74□□□□□ -0.37
GAPVD1-220ENST00000497580 NRIP1P48552 1158 aa12.74□□□□□ -0.37
GAPVD1-220ENST00000497580 CXCR4P61073 352 aa12.74□□□□□ -0.37
GAPVD1-220ENST00000497580 CYP4F8P98187 520 aa12.74□□□□□ -0.37
GAPVD1-220ENST00000497580 NFKB2Q00653 900 aa12.74□□□□□ -0.37
GAPVD1-220ENST00000497580 KEAP1Q14145 624 aa12.74□□□□□ -0.37
GAPVD1-220ENST00000497580 ZMYND11Q15326 602 aa12.74□□□□□ -0.37
GAPVD1-220ENST00000497580 TATDN3Q17R31 274 aa12.74□□□□□ -0.37
GAPVD1-220ENST00000497580 PAN2Q504Q3 1202 aaKnown RBP12.74□□□□□ -0.37
GAPVD1-220ENST00000497580 LETMD1Q6P1Q0 360 aa12.74□□□□□ -0.37
GAPVD1-220ENST00000497580 GPRIN1Q7Z2K8 1008 aa12.74□□□□□ -0.37
GAPVD1-220ENST00000497580 ZNF605Q86T29 641 aa12.74□□□□□ -0.37
GAPVD1-220ENST00000497580 TSPYL5Q86VY4 417 aaPredicted RBP12.74□□□□□ -0.37
GAPVD1-220ENST00000497580 OR8J3Q8NGG0 315 aa12.74□□□□□ -0.37
GAPVD1-220ENST00000497580 WDR36Q8NI36 951 aaKnown RBP12.74□□□□□ -0.37
GAPVD1-220ENST00000497580 APH1BQ8WW43 257 aa12.74□□□□□ -0.37
GAPVD1-220ENST00000497580 GMLQ99445 158 aa12.74□□□□□ -0.37
GAPVD1-220ENST00000497580 GPR21Q99679 349 aa12.74□□□□□ -0.37
GAPVD1-220ENST00000497580 RNF121Q9H920 327 aa12.74□□□□□ -0.37
GAPVD1-220ENST00000497580 C1orf109Q9NX04 203 aa12.74□□□□□ -0.37
GAPVD1-220ENST00000497580 ZNF831Q5JPB2 1677 aa12.74□□□□□ -0.37
GAPVD1-220ENST00000497580 GUCA1CO95843 209 aa12.73□□□□□ -0.37
GAPVD1-220ENST00000497580 EFNA1P20827 205 aaPredicted RBP12.73□□□□□ -0.37
GAPVD1-220ENST00000497580 HOXA9P31269 272 aa12.73□□□□□ -0.37
GAPVD1-220ENST00000497580 CACNB2Q08289 660 aaPredicted RBP12.73□□□□□ -0.37
GAPVD1-220ENST00000497580 C5orf22Q49AR2 442 aa12.73□□□□□ -0.37
GAPVD1-220ENST00000497580 FAM171A1Q5VUB5 890 aa12.73□□□□□ -0.37
GAPVD1-220ENST00000497580 RANBP10Q6VN20 620 aa12.73□□□□□ -0.37
GAPVD1-220ENST00000497580 ADAMTSL2Q86TH1 951 aa12.73□□□□□ -0.37
GAPVD1-220ENST00000497580 DPP10Q8N608 796 aa12.73□□□□□ -0.37
GAPVD1-220ENST00000497580 PPIL3Q9H2H8 161 aaKnown RBP12.73□□□□□ -0.37
GAPVD1-220ENST00000497580 THUMPD1Q9NXG2 353 aaKnown RBP12.73□□□□□ -0.37
GAPVD1-220ENST00000497580 PCDHGB2Q9Y5G2 931 aa12.73□□□□□ -0.37
GAPVD1-220ENST00000497580 WDR81Q562E7 1941 aa12.73□□□□□ -0.37
GAPVD1-220ENST00000497580 IGKV6D-21A0A0A0MT36 114 aa12.73□□□□□ -0.37
GAPVD1-220ENST00000497580 B4DXG7 233 aa12.73□□□□□ -0.37
GAPVD1-220ENST00000497580 CD3EAPO15446 510 aaKnown RBP12.73□□□□□ -0.37
GAPVD1-220ENST00000497580 ENPP1P22413 925 aa12.73□□□□□ -0.37
GAPVD1-220ENST00000497580 ERVPABLB-1P60509 514 aa12.73□□□□□ -0.37
GAPVD1-220ENST00000497580 RAD51Q06609 339 aa12.73□□□□□ -0.37
GAPVD1-220ENST00000497580 SEMA3AQ14563 771 aa12.73□□□□□ -0.37
GAPVD1-220ENST00000497580 METTL7BQ6UX53 244 aa12.73□□□□□ -0.37
GAPVD1-220ENST00000497580 UNC93AQ86WB7 457 aa12.73□□□□□ -0.37
GAPVD1-220ENST00000497580 TEPSINQ96N21 525 aa12.73□□□□□ -0.37
GAPVD1-220ENST00000497580 MCUBQ9NWR8 336 aa12.73□□□□□ -0.37
GAPVD1-220ENST00000497580 DUSP12Q9UNI6 340 aa12.73□□□□□ -0.37
GAPVD1-220ENST00000497580 MGAMO43451 1857 aa12.73□□□□□ -0.37
GAPVD1-220ENST00000497580 A0A0B4J293 547 aa12.73□□□□□ -0.37
GAPVD1-220ENST00000497580 NT5C1B-RDH14C9J2C7 533 aa12.73□□□□□ -0.37
GAPVD1-220ENST00000497580 POU1F1P28069 291 aa12.73□□□□□ -0.37
GAPVD1-220ENST00000497580 MAGEA11P43364 429 aa12.73□□□□□ -0.37
GAPVD1-220ENST00000497580 GZMKP49863 264 aa12.73□□□□□ -0.37
GAPVD1-220ENST00000497580 AP2S1P53680 142 aaPredicted RBP12.73□□□□□ -0.37
GAPVD1-220ENST00000497580 MOB2Q70IA6 237 aa12.73□□□□□ -0.37
GAPVD1-220ENST00000497580 ARMCX2Q7L311 632 aa12.73□□□□□ -0.37
GAPVD1-220ENST00000497580 ABI3BPQ7Z7G0 1075 aa12.73□□□□□ -0.37
GAPVD1-220ENST00000497580 VWA5B2Q8N398 1253 aa12.73□□□□□ -0.37
GAPVD1-220ENST00000497580 RNF31Q96EP0 1072 aa12.73□□□□□ -0.37
GAPVD1-220ENST00000497580 DUSP16Q9BY84 665 aa12.73□□□□□ -0.37
GAPVD1-220ENST00000497580 MRM3Q9HC36 420 aaKnown RBP12.73□□□□□ -0.37
GAPVD1-220ENST00000497580 SPASTQ9UBP0 616 aa12.73□□□□□ -0.37
GAPVD1-220ENST00000497580 ZNF112Q9UJU3 913 aa12.73□□□□□ -0.37
GAPVD1-220ENST00000497580 NDRG4Q9ULP0 352 aaKnown RBP12.73□□□□□ -0.37
GAPVD1-220ENST00000497580 EVPLQ92817 2033 aa12.72□□□□□ -0.37
GAPVD1-220ENST00000497580 SOWAHBA6NEL2 793 aa12.72□□□□□ -0.37
GAPVD1-220ENST00000497580 KERAO60938 352 aa12.72□□□□□ -0.37
GAPVD1-220ENST00000497580 GJB3O75712 270 aa12.72□□□□□ -0.37
GAPVD1-220ENST00000497580 CKMT1AP12532 417 aa12.72□□□□□ -0.37
GAPVD1-220ENST00000497580 TNNI3P19429 210 aa12.72□□□□□ -0.37
GAPVD1-220ENST00000497580 SOX3P41225 446 aa12.72□□□□□ -0.37
GAPVD1-220ENST00000497580 VLDLRP98155 873 aa12.72□□□□□ -0.37
GAPVD1-220ENST00000497580 SUZ12Q15022 739 aaKnown RBP12.72□□□□□ -0.37
GAPVD1-220ENST00000497580 INO80DQ53TQ3 878 aaPredicted RBP12.72□□□□□ -0.37
GAPVD1-220ENST00000497580 PDE12Q6L8Q7 609 aaKnown RBP12.72□□□□□ -0.37
GAPVD1-220ENST00000497580 AGMOQ6ZNB7 445 aa12.72□□□□□ -0.37
GAPVD1-220ENST00000497580 VN1R5Q7Z5H4 357 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms